GO Enrichment Analysis of Co-expressed Genes with
AT5G47110
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 2 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0015979: photosynthesis | 6.76E-13 |
| 5 | GO:0009773: photosynthetic electron transport in photosystem I | 1.10E-07 |
| 6 | GO:0010207: photosystem II assembly | 2.83E-07 |
| 7 | GO:0010196: nonphotochemical quenching | 1.19E-06 |
| 8 | GO:0090391: granum assembly | 5.01E-06 |
| 9 | GO:0015995: chlorophyll biosynthetic process | 1.53E-05 |
| 10 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.16E-05 |
| 11 | GO:0006546: glycine catabolic process | 2.16E-05 |
| 12 | GO:0000413: protein peptidyl-prolyl isomerization | 8.06E-05 |
| 13 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.67E-04 |
| 14 | GO:0043489: RNA stabilization | 1.67E-04 |
| 15 | GO:1902458: positive regulation of stomatal opening | 1.67E-04 |
| 16 | GO:0034337: RNA folding | 1.67E-04 |
| 17 | GO:0009735: response to cytokinin | 1.86E-04 |
| 18 | GO:0010206: photosystem II repair | 1.91E-04 |
| 19 | GO:0010027: thylakoid membrane organization | 2.09E-04 |
| 20 | GO:0045454: cell redox homeostasis | 2.63E-04 |
| 21 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.78E-04 |
| 22 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.78E-04 |
| 23 | GO:0009637: response to blue light | 4.10E-04 |
| 24 | GO:0010114: response to red light | 5.67E-04 |
| 25 | GO:0009768: photosynthesis, light harvesting in photosystem I | 7.02E-04 |
| 26 | GO:0009658: chloroplast organization | 7.91E-04 |
| 27 | GO:0071484: cellular response to light intensity | 8.83E-04 |
| 28 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 8.83E-04 |
| 29 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 8.83E-04 |
| 30 | GO:0050482: arachidonic acid secretion | 8.83E-04 |
| 31 | GO:2001141: regulation of RNA biosynthetic process | 8.83E-04 |
| 32 | GO:0015976: carbon utilization | 1.17E-03 |
| 33 | GO:0009765: photosynthesis, light harvesting | 1.17E-03 |
| 34 | GO:0006183: GTP biosynthetic process | 1.17E-03 |
| 35 | GO:0015994: chlorophyll metabolic process | 1.17E-03 |
| 36 | GO:2000122: negative regulation of stomatal complex development | 1.17E-03 |
| 37 | GO:0010037: response to carbon dioxide | 1.17E-03 |
| 38 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.48E-03 |
| 39 | GO:0031365: N-terminal protein amino acid modification | 1.48E-03 |
| 40 | GO:0009409: response to cold | 1.75E-03 |
| 41 | GO:0010190: cytochrome b6f complex assembly | 1.83E-03 |
| 42 | GO:0006810: transport | 2.06E-03 |
| 43 | GO:1901259: chloroplast rRNA processing | 2.19E-03 |
| 44 | GO:0010019: chloroplast-nucleus signaling pathway | 2.19E-03 |
| 45 | GO:0010555: response to mannitol | 2.19E-03 |
| 46 | GO:0042128: nitrate assimilation | 2.43E-03 |
| 47 | GO:0009772: photosynthetic electron transport in photosystem II | 2.58E-03 |
| 48 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.58E-03 |
| 49 | GO:0009645: response to low light intensity stimulus | 2.58E-03 |
| 50 | GO:0018298: protein-chromophore linkage | 2.84E-03 |
| 51 | GO:0006644: phospholipid metabolic process | 2.99E-03 |
| 52 | GO:0009819: drought recovery | 2.99E-03 |
| 53 | GO:0009642: response to light intensity | 2.99E-03 |
| 54 | GO:2000070: regulation of response to water deprivation | 2.99E-03 |
| 55 | GO:0010218: response to far red light | 3.12E-03 |
| 56 | GO:0009631: cold acclimation | 3.27E-03 |
| 57 | GO:0007568: aging | 3.27E-03 |
| 58 | GO:0071482: cellular response to light stimulus | 3.41E-03 |
| 59 | GO:0015996: chlorophyll catabolic process | 3.41E-03 |
| 60 | GO:0007186: G-protein coupled receptor signaling pathway | 3.41E-03 |
| 61 | GO:0032544: plastid translation | 3.41E-03 |
| 62 | GO:0017004: cytochrome complex assembly | 3.41E-03 |
| 63 | GO:0042742: defense response to bacterium | 3.70E-03 |
| 64 | GO:0071555: cell wall organization | 3.70E-03 |
| 65 | GO:0006783: heme biosynthetic process | 3.86E-03 |
| 66 | GO:0030001: metal ion transport | 4.08E-03 |
| 67 | GO:0006949: syncytium formation | 4.81E-03 |
| 68 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.81E-03 |
| 69 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 4.81E-03 |
| 70 | GO:0006352: DNA-templated transcription, initiation | 5.32E-03 |
| 71 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.32E-03 |
| 72 | GO:0045037: protein import into chloroplast stroma | 5.84E-03 |
| 73 | GO:0010020: chloroplast fission | 6.93E-03 |
| 74 | GO:0010167: response to nitrate | 7.50E-03 |
| 75 | GO:0006833: water transport | 8.10E-03 |
| 76 | GO:0006869: lipid transport | 8.20E-03 |
| 77 | GO:0019344: cysteine biosynthetic process | 8.70E-03 |
| 78 | GO:0016042: lipid catabolic process | 9.17E-03 |
| 79 | GO:0019953: sexual reproduction | 9.33E-03 |
| 80 | GO:0048511: rhythmic process | 9.97E-03 |
| 81 | GO:0009269: response to desiccation | 9.97E-03 |
| 82 | GO:0016998: cell wall macromolecule catabolic process | 9.97E-03 |
| 83 | GO:0006012: galactose metabolic process | 1.13E-02 |
| 84 | GO:0042744: hydrogen peroxide catabolic process | 1.26E-02 |
| 85 | GO:0034220: ion transmembrane transport | 1.34E-02 |
| 86 | GO:0010182: sugar mediated signaling pathway | 1.41E-02 |
| 87 | GO:0015986: ATP synthesis coupled proton transport | 1.49E-02 |
| 88 | GO:0042752: regulation of circadian rhythm | 1.49E-02 |
| 89 | GO:0000302: response to reactive oxygen species | 1.64E-02 |
| 90 | GO:0009828: plant-type cell wall loosening | 1.88E-02 |
| 91 | GO:0009627: systemic acquired resistance | 2.30E-02 |
| 92 | GO:0010411: xyloglucan metabolic process | 2.39E-02 |
| 93 | GO:0042254: ribosome biogenesis | 2.42E-02 |
| 94 | GO:0005975: carbohydrate metabolic process | 2.54E-02 |
| 95 | GO:0009817: defense response to fungus, incompatible interaction | 2.57E-02 |
| 96 | GO:0006457: protein folding | 2.72E-02 |
| 97 | GO:0009834: plant-type secondary cell wall biogenesis | 2.76E-02 |
| 98 | GO:0010119: regulation of stomatal movement | 2.85E-02 |
| 99 | GO:0009853: photorespiration | 3.05E-02 |
| 100 | GO:0045087: innate immune response | 3.05E-02 |
| 101 | GO:0034599: cellular response to oxidative stress | 3.14E-02 |
| 102 | GO:0042546: cell wall biogenesis | 3.75E-02 |
| 103 | GO:0009644: response to high light intensity | 3.86E-02 |
| 104 | GO:0009664: plant-type cell wall organization | 4.29E-02 |
| 105 | GO:0006486: protein glycosylation | 4.51E-02 |
| 106 | GO:0006857: oligopeptide transport | 4.73E-02 |
| 107 | GO:0006979: response to oxidative stress | 4.77E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047889: ferredoxin-nitrate reductase activity | 0.00E+00 |
| 2 | GO:0048307: ferredoxin-nitrite reductase activity | 0.00E+00 |
| 3 | GO:0050421: nitrite reductase (NO-forming) activity | 0.00E+00 |
| 4 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 5 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 6 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.63E-09 |
| 7 | GO:0005528: FK506 binding | 6.22E-07 |
| 8 | GO:0051920: peroxiredoxin activity | 7.29E-07 |
| 9 | GO:0016209: antioxidant activity | 1.83E-06 |
| 10 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.16E-05 |
| 11 | GO:0004853: uroporphyrinogen decarboxylase activity | 1.67E-04 |
| 12 | GO:0005509: calcium ion binding | 1.91E-04 |
| 13 | GO:0019843: rRNA binding | 2.41E-04 |
| 14 | GO:0003938: IMP dehydrogenase activity | 3.78E-04 |
| 15 | GO:0004047: aminomethyltransferase activity | 3.78E-04 |
| 16 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 3.78E-04 |
| 17 | GO:0047746: chlorophyllase activity | 3.78E-04 |
| 18 | GO:0008266: poly(U) RNA binding | 4.63E-04 |
| 19 | GO:0031409: pigment binding | 5.76E-04 |
| 20 | GO:0004324: ferredoxin-NADP+ reductase activity | 6.19E-04 |
| 21 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 6.19E-04 |
| 22 | GO:0004148: dihydrolipoyl dehydrogenase activity | 6.19E-04 |
| 23 | GO:0004751: ribose-5-phosphate isomerase activity | 6.19E-04 |
| 24 | GO:0004601: peroxidase activity | 7.91E-04 |
| 25 | GO:0016851: magnesium chelatase activity | 8.83E-04 |
| 26 | GO:0016836: hydro-lyase activity | 1.17E-03 |
| 27 | GO:0016987: sigma factor activity | 1.17E-03 |
| 28 | GO:1990137: plant seed peroxidase activity | 1.17E-03 |
| 29 | GO:0004659: prenyltransferase activity | 1.17E-03 |
| 30 | GO:0001053: plastid sigma factor activity | 1.17E-03 |
| 31 | GO:0003959: NADPH dehydrogenase activity | 1.48E-03 |
| 32 | GO:0004623: phospholipase A2 activity | 1.48E-03 |
| 33 | GO:0004130: cytochrome-c peroxidase activity | 1.83E-03 |
| 34 | GO:0016688: L-ascorbate peroxidase activity | 1.83E-03 |
| 35 | GO:0051753: mannan synthase activity | 2.19E-03 |
| 36 | GO:0016168: chlorophyll binding | 2.30E-03 |
| 37 | GO:0008235: metalloexopeptidase activity | 2.58E-03 |
| 38 | GO:0004034: aldose 1-epimerase activity | 2.99E-03 |
| 39 | GO:0004033: aldo-keto reductase (NADP) activity | 2.99E-03 |
| 40 | GO:0008289: lipid binding | 3.24E-03 |
| 41 | GO:0016788: hydrolase activity, acting on ester bonds | 4.52E-03 |
| 42 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.99E-03 |
| 43 | GO:0047372: acylglycerol lipase activity | 5.32E-03 |
| 44 | GO:0004177: aminopeptidase activity | 5.32E-03 |
| 45 | GO:0008378: galactosyltransferase activity | 5.84E-03 |
| 46 | GO:0004089: carbonate dehydratase activity | 6.38E-03 |
| 47 | GO:0031072: heat shock protein binding | 6.38E-03 |
| 48 | GO:0043424: protein histidine kinase binding | 9.33E-03 |
| 49 | GO:0030570: pectate lyase activity | 1.13E-02 |
| 50 | GO:0003756: protein disulfide isomerase activity | 1.20E-02 |
| 51 | GO:0003735: structural constituent of ribosome | 1.23E-02 |
| 52 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.41E-02 |
| 53 | GO:0016853: isomerase activity | 1.49E-02 |
| 54 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.64E-02 |
| 55 | GO:0046872: metal ion binding | 1.69E-02 |
| 56 | GO:0008483: transaminase activity | 1.96E-02 |
| 57 | GO:0015250: water channel activity | 2.13E-02 |
| 58 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.39E-02 |
| 59 | GO:0043531: ADP binding | 2.61E-02 |
| 60 | GO:0052689: carboxylic ester hydrolase activity | 3.26E-02 |
| 61 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.34E-02 |
| 62 | GO:0005198: structural molecule activity | 3.96E-02 |
| 63 | GO:0015293: symporter activity | 3.96E-02 |
| 64 | GO:0016787: hydrolase activity | 4.20E-02 |
| 65 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.51E-02 |
| 66 | GO:0003690: double-stranded DNA binding | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009575: chromoplast stroma | 0.00E+00 |
| 2 | GO:0009515: granal stacked thylakoid | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 3.08E-47 |
| 4 | GO:0009534: chloroplast thylakoid | 2.76E-42 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 4.86E-39 |
| 6 | GO:0009579: thylakoid | 1.82E-30 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 8.93E-25 |
| 8 | GO:0009570: chloroplast stroma | 1.26E-24 |
| 9 | GO:0009941: chloroplast envelope | 3.34E-24 |
| 10 | GO:0031977: thylakoid lumen | 1.86E-20 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 1.08E-08 |
| 12 | GO:0019898: extrinsic component of membrane | 9.08E-08 |
| 13 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.78E-06 |
| 14 | GO:0010319: stromule | 8.47E-06 |
| 15 | GO:0005960: glycine cleavage complex | 1.16E-05 |
| 16 | GO:0010287: plastoglobule | 1.93E-05 |
| 17 | GO:0048046: apoplast | 2.58E-05 |
| 18 | GO:0042651: thylakoid membrane | 3.58E-05 |
| 19 | GO:0009533: chloroplast stromal thylakoid | 9.72E-05 |
| 20 | GO:0009706: chloroplast inner membrane | 1.64E-04 |
| 21 | GO:0030095: chloroplast photosystem II | 4.63E-04 |
| 22 | GO:0030076: light-harvesting complex | 5.19E-04 |
| 23 | GO:0009528: plastid inner membrane | 6.19E-04 |
| 24 | GO:0010007: magnesium chelatase complex | 6.19E-04 |
| 25 | GO:0015935: small ribosomal subunit | 7.70E-04 |
| 26 | GO:0009532: plastid stroma | 7.70E-04 |
| 27 | GO:0009527: plastid outer membrane | 1.17E-03 |
| 28 | GO:0009517: PSII associated light-harvesting complex II | 1.17E-03 |
| 29 | GO:0009522: photosystem I | 1.33E-03 |
| 30 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.83E-03 |
| 31 | GO:0009538: photosystem I reaction center | 2.99E-03 |
| 32 | GO:0005811: lipid particle | 3.41E-03 |
| 33 | GO:0005840: ribosome | 4.02E-03 |
| 34 | GO:0032040: small-subunit processome | 5.84E-03 |
| 35 | GO:0031410: cytoplasmic vesicle | 1.06E-02 |
| 36 | GO:0009523: photosystem II | 1.56E-02 |
| 37 | GO:0030529: intracellular ribonucleoprotein complex | 2.13E-02 |
| 38 | GO:0016020: membrane | 2.56E-02 |
| 39 | GO:0009707: chloroplast outer membrane | 2.57E-02 |
| 40 | GO:0031969: chloroplast membrane | 2.95E-02 |
| 41 | GO:0016021: integral component of membrane | 3.08E-02 |
| 42 | GO:0005618: cell wall | 3.91E-02 |