co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G44190

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006003: fructose 2,6-bisphosphate metabolic process	0.00E+00
2	GO:0015822: ornithine transport	0.00E+00
3	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
4	GO:0090706: specification of plant organ position	0.00E+00
5	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
6	GO:0007172: signal complex assembly	0.00E+00
7	GO:0071482: cellular response to light stimulus	2.84E-05
8	GO:0043609: regulation of carbon utilization	5.48E-05
9	GO:0000066: mitochondrial ornithine transport	5.48E-05
10	GO:0051013: microtubule severing	5.48E-05
11	GO:0010450: inflorescence meristem growth	5.48E-05
12	GO:0016119: carotene metabolic process	5.48E-05
13	GO:0010223: secondary shoot formation	9.76E-05
14	GO:0071230: cellular response to amino acid stimulus	2.28E-04
15	GO:0045165: cell fate commitment	2.28E-04
16	GO:0006000: fructose metabolic process	2.28E-04
17	GO:0010305: leaf vascular tissue pattern formation	2.91E-04
18	GO:1902183: regulation of shoot apical meristem development	5.66E-04
19	GO:0016123: xanthophyll biosynthetic process	5.66E-04
20	GO:0010158: abaxial cell fate specification	5.66E-04
21	GO:0016120: carotene biosynthetic process	5.66E-04
22	GO:0043097: pyrimidine nucleoside salvage	5.66E-04
23	GO:0010304: PSII associated light-harvesting complex II catabolic process	6.92E-04
24	GO:0006206: pyrimidine nucleobase metabolic process	6.92E-04
25	GO:0009854: oxidative photosynthetic carbon pathway	8.25E-04
26	GO:0010067: procambium histogenesis	8.25E-04
27	GO:0009853: photorespiration	8.40E-04
28	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	9.62E-04
29	GO:1900057: positive regulation of leaf senescence	9.62E-04
30	GO:0050821: protein stabilization	1.11E-03
31	GO:0034968: histone lysine methylation	1.11E-03
32	GO:0048564: photosystem I assembly	1.11E-03
33	GO:0010100: negative regulation of photomorphogenesis	1.26E-03
34	GO:0010093: specification of floral organ identity	1.26E-03
35	GO:0006002: fructose 6-phosphate metabolic process	1.26E-03
36	GO:0000373: Group II intron splicing	1.41E-03
37	GO:0048507: meristem development	1.41E-03
38	GO:0009821: alkaloid biosynthetic process	1.41E-03
39	GO:0010206: photosystem II repair	1.41E-03
40	GO:2000024: regulation of leaf development	1.41E-03
41	GO:0010205: photoinhibition	1.58E-03
42	GO:0016571: histone methylation	1.58E-03
43	GO:0009641: shade avoidance	1.75E-03
44	GO:0055062: phosphate ion homeostasis	1.75E-03
45	GO:0055114: oxidation-reduction process	1.92E-03
46	GO:0018119: peptidyl-cysteine S-nitrosylation	1.93E-03
47	GO:0046856: phosphatidylinositol dephosphorylation	1.93E-03
48	GO:0006816: calcium ion transport	1.93E-03
49	GO:0018107: peptidyl-threonine phosphorylation	2.30E-03
50	GO:0009934: regulation of meristem structural organization	2.49E-03
51	GO:0009933: meristem structural organization	2.49E-03
52	GO:0019253: reductive pentose-phosphate cycle	2.49E-03
53	GO:0010207: photosystem II assembly	2.49E-03
54	GO:0009058: biosynthetic process	2.63E-03
55	GO:0009825: multidimensional cell growth	2.70E-03
56	GO:0006636: unsaturated fatty acid biosynthetic process	2.90E-03
57	GO:0009416: response to light stimulus	2.91E-03
58	GO:0006289: nucleotide-excision repair	3.11E-03
59	GO:2000377: regulation of reactive oxygen species metabolic process	3.11E-03
60	GO:0009944: polarity specification of adaxial/abaxial axis	3.11E-03
61	GO:0006874: cellular calcium ion homeostasis	3.32E-03
62	GO:0043622: cortical microtubule organization	3.32E-03
63	GO:0061077: chaperone-mediated protein folding	3.54E-03
64	GO:0080092: regulation of pollen tube growth	3.77E-03
65	GO:0001944: vasculature development	4.00E-03
66	GO:0010089: xylem development	4.23E-03
67	GO:0010091: trichome branching	4.23E-03
68	GO:0016117: carotenoid biosynthetic process	4.47E-03
69	GO:0042631: cellular response to water deprivation	4.71E-03
70	GO:0000226: microtubule cytoskeleton organization	4.71E-03
71	GO:0071472: cellular response to salt stress	4.96E-03
72	GO:0010154: fruit development	4.96E-03
73	GO:0042752: regulation of circadian rhythm	5.22E-03
74	GO:0009630: gravitropism	6.00E-03
75	GO:0016032: viral process	6.00E-03
76	GO:0030163: protein catabolic process	6.27E-03
77	GO:0016126: sterol biosynthetic process	7.40E-03
78	GO:0006468: protein phosphorylation	9.21E-03
79	GO:0009832: plant-type cell wall biogenesis	9.22E-03
80	GO:0006811: ion transport	9.54E-03
81	GO:0006499: N-terminal protein myristoylation	9.54E-03
82	GO:0009910: negative regulation of flower development	9.86E-03
83	GO:0009631: cold acclimation	9.86E-03
84	GO:0045087: innate immune response	1.05E-02
85	GO:0006839: mitochondrial transport	1.15E-02
86	GO:0030001: metal ion transport	1.15E-02
87	GO:0009640: photomorphogenesis	1.26E-02
88	GO:0009734: auxin-activated signaling pathway	1.36E-02
89	GO:0009585: red, far-red light phototransduction	1.55E-02
90	GO:0009735: response to cytokinin	1.57E-02
91	GO:0009909: regulation of flower development	1.67E-02
92	GO:0035556: intracellular signal transduction	1.81E-02
93	GO:0009737: response to abscisic acid	1.86E-02
94	GO:0018105: peptidyl-serine phosphorylation	2.04E-02
95	GO:0009793: embryo development ending in seed dormancy	2.06E-02
96	GO:0055085: transmembrane transport	2.18E-02
97	GO:0042744: hydrogen peroxide catabolic process	2.57E-02
98	GO:0009790: embryo development	2.61E-02
99	GO:0006633: fatty acid biosynthetic process	2.75E-02
100	GO:0006413: translational initiation	2.80E-02
101	GO:0006508: proteolysis	2.94E-02
102	GO:0007623: circadian rhythm	2.94E-02
103	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	3.19E-02
104	GO:0009739: response to gibberellin	3.19E-02
105	GO:0007166: cell surface receptor signaling pathway	3.24E-02
106	GO:0009733: response to auxin	3.90E-02
107	GO:0009658: chloroplast organization	4.01E-02
108	GO:0009860: pollen tube growth	4.23E-02
109	GO:0006970: response to osmotic stress	4.23E-02
110	GO:0009723: response to ethylene	4.45E-02
111	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	4.79E-02
112	GO:0046777: protein autophosphorylation	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0008974: phosphoribulokinase activity	0.00E+00
2	GO:0008465: glycerate dehydrogenase activity	0.00E+00
3	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
4	GO:0045436: lycopene beta cyclase activity	0.00E+00
5	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
6	GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity	0.00E+00
7	GO:0003873: 6-phosphofructo-2-kinase activity	0.00E+00
8	GO:0008066: glutamate receptor activity	5.48E-05
9	GO:0008568: microtubule-severing ATPase activity	5.48E-05
10	GO:0005524: ATP binding	7.70E-05
11	GO:0010291: carotene beta-ring hydroxylase activity	1.34E-04
12	GO:0004312: fatty acid synthase activity	1.34E-04
13	GO:0000064: L-ornithine transmembrane transporter activity	1.34E-04
14	GO:0016805: dipeptidase activity	2.28E-04
15	GO:0010429: methyl-CpNpN binding	2.28E-04
16	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	2.28E-04
17	GO:0004180: carboxypeptidase activity	2.28E-04
18	GO:0010428: methyl-CpNpG binding	2.28E-04
19	GO:0004148: dihydrolipoyl dehydrogenase activity	2.28E-04
20	GO:0008453: alanine-glyoxylate transaminase activity	4.45E-04
21	GO:0004506: squalene monooxygenase activity	4.45E-04
22	GO:0070628: proteasome binding	4.45E-04
23	GO:2001070: starch binding	6.92E-04
24	GO:0000293: ferric-chelate reductase activity	6.92E-04
25	GO:0031593: polyubiquitin binding	6.92E-04
26	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	6.92E-04
27	GO:0004849: uridine kinase activity	8.25E-04
28	GO:0071949: FAD binding	1.41E-03
29	GO:0000989: transcription factor activity, transcription factor binding	1.41E-03
30	GO:0016844: strictosidine synthase activity	1.58E-03
31	GO:0008327: methyl-CpG binding	1.93E-03
32	GO:0044183: protein binding involved in protein folding	1.93E-03
33	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.93E-03
34	GO:0019904: protein domain specific binding	1.93E-03
35	GO:0016491: oxidoreductase activity	2.09E-03
36	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	2.11E-03
37	GO:0008081: phosphoric diester hydrolase activity	2.30E-03
38	GO:0005262: calcium channel activity	2.30E-03
39	GO:0008266: poly(U) RNA binding	2.49E-03
40	GO:0004970: ionotropic glutamate receptor activity	2.70E-03
41	GO:0004190: aspartic-type endopeptidase activity	2.70E-03
42	GO:0005217: intracellular ligand-gated ion channel activity	2.70E-03
43	GO:0003954: NADH dehydrogenase activity	3.11E-03
44	GO:0043130: ubiquitin binding	3.11E-03
45	GO:0004176: ATP-dependent peptidase activity	3.54E-03
46	GO:0033612: receptor serine/threonine kinase binding	3.54E-03
47	GO:0008017: microtubule binding	3.58E-03
48	GO:0004674: protein serine/threonine kinase activity	4.20E-03
49	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.34E-03
50	GO:0016787: hydrolase activity	4.37E-03
51	GO:0018024: histone-lysine N-methyltransferase activity	4.47E-03
52	GO:0050660: flavin adenine dinucleotide binding	6.10E-03
53	GO:0003684: damaged DNA binding	6.55E-03
54	GO:0008483: transaminase activity	6.83E-03
55	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	6.83E-03
56	GO:0008237: metallopeptidase activity	6.83E-03
57	GO:0004222: metalloendopeptidase activity	9.54E-03
58	GO:0005515: protein binding	9.82E-03
59	GO:0050897: cobalt ion binding	9.86E-03
60	GO:0003746: translation elongation factor activity	1.05E-02
61	GO:0003993: acid phosphatase activity	1.09E-02
62	GO:0042393: histone binding	1.15E-02
63	GO:0016301: kinase activity	1.22E-02
64	GO:0043621: protein self-association	1.33E-02
65	GO:0051287: NAD binding	1.44E-02
66	GO:0003777: microtubule motor activity	1.67E-02
67	GO:0046872: metal ion binding	2.12E-02
68	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.38E-02
69	GO:0030170: pyridoxal phosphate binding	2.52E-02
70	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.80E-02
71	GO:0042802: identical protein binding	3.49E-02
72	GO:0008168: methyltransferase activity	3.91E-02
73	GO:0004601: peroxidase activity	4.01E-02
74	GO:0016788: hydrolase activity, acting on ester bonds	4.07E-02
75	GO:0008233: peptidase activity	4.62E-02
76	GO:0004497: monooxygenase activity	4.68E-02

Rank	GO Term	Adjusted P value
1	GO:0031304: intrinsic component of mitochondrial inner membrane	1.34E-04
2	GO:0030660: Golgi-associated vesicle membrane	4.45E-04
3	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	4.45E-04
4	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.11E-03
5	GO:0008180: COP9 signalosome	1.41E-03
6	GO:0009507: chloroplast	1.70E-03
7	GO:0016324: apical plasma membrane	1.75E-03
8	GO:0009570: chloroplast stroma	1.93E-03
9	GO:0005765: lysosomal membrane	1.93E-03
10	GO:0005777: peroxisome	3.47E-03
11	GO:0005886: plasma membrane	3.67E-03
12	GO:0000775: chromosome, centromeric region	3.77E-03
13	GO:0005874: microtubule	6.32E-03
14	GO:0031969: chloroplast membrane	6.54E-03
15	GO:0010319: stromule	6.83E-03
16	GO:0030529: intracellular ribonucleoprotein complex	7.40E-03
17	GO:0019005: SCF ubiquitin ligase complex	8.91E-03
18	GO:0048046: apoplast	9.75E-03
19	GO:0000325: plant-type vacuole	9.86E-03
20	GO:0009941: chloroplast envelope	1.44E-02
21	GO:0000502: proteasome complex	1.55E-02
22	GO:0010008: endosome membrane	1.79E-02
23	GO:0005747: mitochondrial respiratory chain complex I	1.79E-02
24	GO:0009579: thylakoid	2.06E-02
25	GO:0010287: plastoglobule	2.25E-02
26	GO:0005759: mitochondrial matrix	2.75E-02
27	GO:0009536: plastid	4.26E-02
28	GO:0016020: membrane	4.54E-02
29	GO:0016021: integral component of membrane	4.81E-02