Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G44180

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1900490: positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity0.00E+00
2GO:0048358: mucilage pectin biosynthetic process7.41E-06
3GO:0010393: galacturonan metabolic process7.41E-06
4GO:0045931: positive regulation of mitotic cell cycle7.41E-06
5GO:0034728: nucleosome organization7.41E-06
6GO:0097298: regulation of nucleus size7.41E-06
7GO:1900036: positive regulation of cellular response to heat7.41E-06
8GO:0016584: nucleosome positioning2.00E-05
9GO:0071217: cellular response to external biotic stimulus2.00E-05
10GO:0046898: response to cycloheximide2.00E-05
11GO:0043044: ATP-dependent chromatin remodeling3.67E-05
12GO:0010272: response to silver ion3.67E-05
13GO:0016049: cell growth4.64E-05
14GO:0080001: mucilage extrusion from seed coat5.65E-05
15GO:1902183: regulation of shoot apical meristem development1.04E-04
16GO:0048359: mucilage metabolic process involved in seed coat development1.04E-04
17GO:0006364: rRNA processing1.20E-04
18GO:0047484: regulation of response to osmotic stress1.30E-04
19GO:1901001: negative regulation of response to salt stress1.59E-04
20GO:1902074: response to salt1.88E-04
21GO:0006401: RNA catabolic process1.88E-04
22GO:0045995: regulation of embryonic development1.88E-04
23GO:0000398: mRNA splicing, via spliceosome2.04E-04
24GO:0006997: nucleus organization2.52E-04
25GO:0009827: plant-type cell wall modification2.52E-04
26GO:0000184: nuclear-transcribed mRNA catabolic process, nonsense-mediated decay2.85E-04
27GO:2000024: regulation of leaf development2.85E-04
28GO:0010345: suberin biosynthetic process2.85E-04
29GO:0010192: mucilage biosynthetic process3.54E-04
30GO:0010143: cutin biosynthetic process5.02E-04
31GO:0010053: root epidermal cell differentiation5.40E-04
32GO:0010025: wax biosynthetic process5.80E-04
33GO:0009944: polarity specification of adaxial/abaxial axis6.20E-04
34GO:0010073: meristem maintenance6.61E-04
35GO:0008299: isoprenoid biosynthetic process6.61E-04
36GO:0030433: ubiquitin-dependent ERAD pathway7.45E-04
37GO:0009294: DNA mediated transformation7.88E-04
38GO:0009561: megagametogenesis8.32E-04
39GO:0010501: RNA secondary structure unwinding9.19E-04
40GO:0042335: cuticle development9.19E-04
41GO:0048510: regulation of timing of transition from vegetative to reproductive phase1.10E-03
42GO:0002229: defense response to oomycetes1.10E-03
43GO:0009908: flower development1.32E-03
44GO:0001666: response to hypoxia1.40E-03
45GO:0006974: cellular response to DNA damage stimulus1.50E-03
46GO:0008219: cell death1.67E-03
47GO:0009414: response to water deprivation2.83E-03
48GO:0009909: regulation of flower development3.03E-03
49GO:0009620: response to fungus3.37E-03
50GO:0016569: covalent chromatin modification3.44E-03
51GO:0009553: embryo sac development3.51E-03
52GO:0009624: response to nematode3.59E-03
53GO:0009742: brassinosteroid mediated signaling pathway3.73E-03
54GO:0009790: embryo development4.64E-03
55GO:0010228: vegetative to reproductive phase transition of meristem5.37E-03
56GO:0007166: cell surface receptor signaling pathway5.71E-03
57GO:0008380: RNA splicing5.88E-03
58GO:0009617: response to bacterium5.88E-03
59GO:0045892: negative regulation of transcription, DNA-templated9.37E-03
60GO:0009751: response to salicylic acid1.06E-02
61GO:0048364: root development1.11E-02
62GO:0009753: response to jasmonic acid1.13E-02
63GO:0009611: response to wounding1.64E-02
64GO:0045893: positive regulation of transcription, DNA-templated1.78E-02
65GO:0006414: translational elongation2.14E-02
66GO:0006468: protein phosphorylation2.24E-02
67GO:0006355: regulation of transcription, DNA-templated2.35E-02
68GO:0042742: defense response to bacterium2.67E-02
69GO:0006979: response to oxidative stress2.68E-02
70GO:0030154: cell differentiation2.83E-02
71GO:0009733: response to auxin2.90E-02
72GO:0009737: response to abscisic acid4.57E-02
73GO:0006351: transcription, DNA-templated4.71E-02
RankGO TermAdjusted P value
1GO:0045131: pre-mRNA branch point binding0.00E+00
2GO:0030619: U1 snRNA binding2.00E-05
3GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway7.90E-05
4GO:0031491: nucleosome binding1.59E-04
5GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides1.59E-04
6GO:0004714: transmembrane receptor protein tyrosine kinase activity2.20E-04
7GO:0000175: 3'-5'-exoribonuclease activity4.64E-04
8GO:0046982: protein heterodimerization activity4.65E-04
9GO:0005515: protein binding7.00E-04
10GO:0008094: DNA-dependent ATPase activity7.02E-04
11GO:0033612: receptor serine/threonine kinase binding7.02E-04
12GO:0004540: ribonuclease activity7.02E-04
13GO:0004527: exonuclease activity9.64E-04
14GO:0003713: transcription coactivator activity9.64E-04
15GO:0016887: ATPase activity1.28E-03
16GO:0004004: ATP-dependent RNA helicase activity1.56E-03
17GO:0003746: translation elongation factor activity1.95E-03
18GO:0004712: protein serine/threonine/tyrosine kinase activity2.07E-03
19GO:0004386: helicase activity3.81E-03
20GO:0003677: DNA binding3.88E-03
21GO:0003723: RNA binding3.92E-03
22GO:0004672: protein kinase activity4.24E-03
23GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.96E-03
24GO:0005524: ATP binding6.23E-03
25GO:0016301: kinase activity1.04E-02
26GO:0004519: endonuclease activity1.14E-02
27GO:0008270: zinc ion binding1.75E-02
28GO:0004842: ubiquitin-protein transferase activity3.36E-02
29GO:0003729: mRNA binding3.54E-02
RankGO TermAdjusted P value
1GO:0005652: nuclear lamina3.67E-05
2GO:0000178: exosome (RNase complex)1.04E-04
3GO:0000243: commitment complex1.30E-04
4GO:0010369: chromocenter1.59E-04
5GO:0071004: U2-type prespliceosome2.20E-04
6GO:0034399: nuclear periphery2.20E-04
7GO:0005685: U1 snRNP2.85E-04
8GO:0071011: precatalytic spliceosome3.19E-04
9GO:0030176: integral component of endoplasmic reticulum membrane5.40E-04
10GO:0043234: protein complex5.80E-04
11GO:0031965: nuclear membrane1.06E-03
12GO:0005634: nucleus1.25E-03
13GO:0016607: nuclear speck3.23E-03
14GO:0010008: endosome membrane3.23E-03
15GO:0005654: nucleoplasm4.10E-03
16GO:0005768: endosome2.47E-02
17GO:0005886: plasma membrane4.97E-02
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Gene type



Gene DE type