Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G44020

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006399: tRNA metabolic process0.00E+00
2GO:0042593: glucose homeostasis0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
5GO:0033494: ferulate metabolic process0.00E+00
6GO:1901698: response to nitrogen compound0.00E+00
7GO:2000121: regulation of removal of superoxide radicals0.00E+00
8GO:0015979: photosynthesis1.55E-12
9GO:0006412: translation5.08E-11
10GO:0015995: chlorophyll biosynthetic process1.75E-09
11GO:0042254: ribosome biogenesis1.01E-08
12GO:0009735: response to cytokinin2.80E-07
13GO:0032544: plastid translation6.42E-07
14GO:0009772: photosynthetic electron transport in photosystem II1.62E-05
15GO:0006782: protoporphyrinogen IX biosynthetic process7.84E-05
16GO:0009826: unidimensional cell growth8.23E-05
17GO:0015976: carbon utilization1.25E-04
18GO:0010207: photosystem II assembly1.76E-04
19GO:0006833: water transport2.42E-04
20GO:0010411: xyloglucan metabolic process2.53E-04
21GO:0042372: phylloquinone biosynthetic process3.65E-04
22GO:0009831: plant-type cell wall modification involved in multidimensional cell growth4.61E-04
23GO:0010442: guard cell morphogenesis4.70E-04
24GO:0071370: cellular response to gibberellin stimulus4.70E-04
25GO:0046520: sphingoid biosynthetic process4.70E-04
26GO:1904964: positive regulation of phytol biosynthetic process4.70E-04
27GO:0042371: vitamin K biosynthetic process4.70E-04
28GO:0071588: hydrogen peroxide mediated signaling pathway4.70E-04
29GO:0010729: positive regulation of hydrogen peroxide biosynthetic process4.70E-04
30GO:1904966: positive regulation of vitamin E biosynthetic process4.70E-04
31GO:0034220: ion transmembrane transport6.30E-04
32GO:0000413: protein peptidyl-prolyl isomerization6.30E-04
33GO:0009932: cell tip growth7.14E-04
34GO:0006783: heme biosynthetic process8.55E-04
35GO:0010206: photosystem II repair8.55E-04
36GO:0045490: pectin catabolic process9.08E-04
37GO:0031648: protein destabilization1.01E-03
38GO:0006521: regulation of cellular amino acid metabolic process1.01E-03
39GO:0052541: plant-type cell wall cellulose metabolic process1.01E-03
40GO:0006779: porphyrin-containing compound biosynthetic process1.01E-03
41GO:1902326: positive regulation of chlorophyll biosynthetic process1.01E-03
42GO:0055114: oxidation-reduction process1.08E-03
43GO:0009828: plant-type cell wall loosening1.15E-03
44GO:0006949: syncytium formation1.17E-03
45GO:0009773: photosynthetic electron transport in photosystem I1.35E-03
46GO:0010027: thylakoid membrane organization1.44E-03
47GO:0015706: nitrate transport1.55E-03
48GO:0015840: urea transport1.65E-03
49GO:0071705: nitrogen compound transport1.65E-03
50GO:0045493: xylan catabolic process1.65E-03
51GO:0015714: phosphoenolpyruvate transport1.65E-03
52GO:0006006: glucose metabolic process1.76E-03
53GO:0009725: response to hormone1.76E-03
54GO:0009658: chloroplast organization1.96E-03
55GO:0010143: cutin biosynthetic process1.98E-03
56GO:0010030: positive regulation of seed germination2.22E-03
57GO:0010167: response to nitrate2.22E-03
58GO:0006810: transport2.25E-03
59GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis2.39E-03
60GO:2001141: regulation of RNA biosynthetic process2.39E-03
61GO:1902476: chloride transmembrane transport2.39E-03
62GO:0051513: regulation of monopolar cell growth2.39E-03
63GO:0071484: cellular response to light intensity2.39E-03
64GO:0080170: hydrogen peroxide transmembrane transport2.39E-03
65GO:0010731: protein glutathionylation2.39E-03
66GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.39E-03
67GO:0006636: unsaturated fatty acid biosynthetic process2.48E-03
68GO:0019344: cysteine biosynthetic process2.75E-03
69GO:0000027: ribosomal large subunit assembly2.75E-03
70GO:0015713: phosphoglycerate transport3.22E-03
71GO:0010037: response to carbon dioxide3.22E-03
72GO:0071249: cellular response to nitrate3.22E-03
73GO:2000122: negative regulation of stomatal complex development3.22E-03
74GO:0030104: water homeostasis3.22E-03
75GO:0009733: response to auxin3.22E-03
76GO:0010114: response to red light3.78E-03
77GO:0040008: regulation of growth3.78E-03
78GO:0042546: cell wall biogenesis3.98E-03
79GO:0010236: plastoquinone biosynthetic process4.13E-03
80GO:0009247: glycolipid biosynthetic process4.13E-03
81GO:0034052: positive regulation of plant-type hypersensitive response4.13E-03
82GO:0032543: mitochondrial translation4.13E-03
83GO:0009664: plant-type cell wall organization5.06E-03
84GO:0042335: cuticle development5.09E-03
85GO:0007035: vacuolar acidification5.11E-03
86GO:0032973: amino acid export5.11E-03
87GO:0042549: photosystem II stabilization5.11E-03
88GO:1902456: regulation of stomatal opening5.11E-03
89GO:1901259: chloroplast rRNA processing6.17E-03
90GO:0009854: oxidative photosynthetic carbon pathway6.17E-03
91GO:0010019: chloroplast-nucleus signaling pathway6.17E-03
92GO:0010555: response to mannitol6.17E-03
93GO:0009955: adaxial/abaxial pattern specification6.17E-03
94GO:0009612: response to mechanical stimulus6.17E-03
95GO:0006694: steroid biosynthetic process6.17E-03
96GO:0016132: brassinosteroid biosynthetic process6.79E-03
97GO:0000302: response to reactive oxygen species6.79E-03
98GO:0071555: cell wall organization6.99E-03
99GO:0010583: response to cyclopentenone7.26E-03
100GO:0050829: defense response to Gram-negative bacterium7.30E-03
101GO:0009610: response to symbiotic fungus7.30E-03
102GO:0043090: amino acid import7.30E-03
103GO:0030497: fatty acid elongation7.30E-03
104GO:0006821: chloride transport7.30E-03
105GO:0009645: response to low light intensity stimulus7.30E-03
106GO:0010444: guard mother cell differentiation7.30E-03
107GO:0009740: gibberellic acid mediated signaling pathway8.05E-03
108GO:0042545: cell wall modification8.37E-03
109GO:0019375: galactolipid biosynthetic process8.49E-03
110GO:0042255: ribosome assembly8.49E-03
111GO:0046620: regulation of organ growth8.49E-03
112GO:0007155: cell adhesion8.49E-03
113GO:0048564: photosystem I assembly8.49E-03
114GO:0030091: protein repair8.49E-03
115GO:0009642: response to light intensity8.49E-03
116GO:0043068: positive regulation of programmed cell death8.49E-03
117GO:0006605: protein targeting8.49E-03
118GO:0009808: lignin metabolic process9.75E-03
119GO:0071482: cellular response to light stimulus9.75E-03
120GO:0009657: plastid organization9.75E-03
121GO:0009627: systemic acquired resistance1.10E-02
122GO:0000373: Group II intron splicing1.11E-02
123GO:0009051: pentose-phosphate shunt, oxidative branch1.11E-02
124GO:0051865: protein autoubiquitination1.11E-02
125GO:0080144: amino acid homeostasis1.11E-02
126GO:0010205: photoinhibition1.25E-02
127GO:0018298: protein-chromophore linkage1.29E-02
128GO:0009409: response to cold1.33E-02
129GO:0042744: hydrogen peroxide catabolic process1.37E-02
130GO:0009299: mRNA transcription1.39E-02
131GO:0009870: defense response signaling pathway, resistance gene-dependent1.39E-02
132GO:0006535: cysteine biosynthetic process from serine1.39E-02
133GO:0045454: cell redox homeostasis1.44E-02
134GO:0006352: DNA-templated transcription, initiation1.54E-02
135GO:0009750: response to fructose1.54E-02
136GO:0018119: peptidyl-cysteine S-nitrosylation1.54E-02
137GO:0048765: root hair cell differentiation1.54E-02
138GO:0010015: root morphogenesis1.54E-02
139GO:0000038: very long-chain fatty acid metabolic process1.54E-02
140GO:0009698: phenylpropanoid metabolic process1.54E-02
141GO:0009637: response to blue light1.64E-02
142GO:0016024: CDP-diacylglycerol biosynthetic process1.70E-02
143GO:0034599: cellular response to oxidative stress1.71E-02
144GO:0050826: response to freezing1.86E-02
145GO:0042742: defense response to bacterium1.92E-02
146GO:0019253: reductive pentose-phosphate cycle2.03E-02
147GO:0010053: root epidermal cell differentiation2.20E-02
148GO:0005985: sucrose metabolic process2.20E-02
149GO:0006071: glycerol metabolic process2.38E-02
150GO:0019762: glucosinolate catabolic process2.38E-02
151GO:0010025: wax biosynthetic process2.38E-02
152GO:0006457: protein folding2.39E-02
153GO:0045333: cellular respiration2.56E-02
154GO:0005992: trehalose biosynthetic process2.56E-02
155GO:0006487: protein N-linked glycosylation2.56E-02
156GO:0009768: photosynthesis, light harvesting in photosystem I2.74E-02
157GO:0010026: trichome differentiation2.74E-02
158GO:0015992: proton transport2.94E-02
159GO:0048511: rhythmic process2.94E-02
160GO:0061077: chaperone-mediated protein folding2.94E-02
161GO:0031408: oxylipin biosynthetic process2.94E-02
162GO:0035428: hexose transmembrane transport3.13E-02
163GO:0019748: secondary metabolic process3.13E-02
164GO:0009814: defense response, incompatible interaction3.13E-02
165GO:2000022: regulation of jasmonic acid mediated signaling pathway3.13E-02
166GO:0006417: regulation of translation3.16E-02
167GO:0009734: auxin-activated signaling pathway3.27E-02
168GO:0019722: calcium-mediated signaling3.54E-02
169GO:0009306: protein secretion3.54E-02
170GO:0006284: base-excision repair3.54E-02
171GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.74E-02
172GO:0080167: response to karrikin3.95E-02
173GO:0080022: primary root development3.96E-02
174GO:0010087: phloem or xylem histogenesis3.96E-02
175GO:0042631: cellular response to water deprivation3.96E-02
176GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.12E-02
177GO:0010305: leaf vascular tissue pattern formation4.17E-02
178GO:0046323: glucose import4.17E-02
179GO:0009742: brassinosteroid mediated signaling pathway4.30E-02
180GO:0015986: ATP synthesis coupled proton transport4.39E-02
181GO:0042752: regulation of circadian rhythm4.39E-02
182GO:0009749: response to glucose4.62E-02
183GO:0002229: defense response to oomycetes4.85E-02
RankGO TermAdjusted P value
1GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
2GO:0050614: delta24-sterol reductase activity0.00E+00
3GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
4GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
5GO:0047513: 1,2-alpha-L-fucosidase activity0.00E+00
6GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
7GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
8GO:0008887: glycerate kinase activity0.00E+00
9GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
10GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
11GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
12GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
13GO:0019843: rRNA binding1.26E-17
14GO:0003735: structural constituent of ribosome1.20E-14
15GO:0003755: peptidyl-prolyl cis-trans isomerase activity4.15E-08
16GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity9.75E-06
17GO:0005528: FK506 binding1.62E-05
18GO:0016851: magnesium chelatase activity7.17E-05
19GO:0015250: water channel activity1.91E-04
20GO:0004130: cytochrome-c peroxidase activity2.73E-04
21GO:0051920: peroxiredoxin activity3.65E-04
22GO:0009671: nitrate:proton symporter activity4.70E-04
23GO:0004853: uroporphyrinogen decarboxylase activity4.70E-04
24GO:0000248: C-5 sterol desaturase activity4.70E-04
25GO:0000170: sphingosine hydroxylase activity4.70E-04
26GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity4.70E-04
27GO:0015121: phosphoenolpyruvate:phosphate antiporter activity4.70E-04
28GO:0004655: porphobilinogen synthase activity4.70E-04
29GO:0015200: methylammonium transmembrane transporter activity4.70E-04
30GO:0016209: antioxidant activity5.86E-04
31GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.14E-04
32GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds8.77E-04
33GO:0016762: xyloglucan:xyloglucosyl transferase activity9.05E-04
34GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity1.01E-03
35GO:0008967: phosphoglycolate phosphatase activity1.01E-03
36GO:0042389: omega-3 fatty acid desaturase activity1.01E-03
37GO:0043425: bHLH transcription factor binding1.01E-03
38GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity1.01E-03
39GO:0042284: sphingolipid delta-4 desaturase activity1.01E-03
40GO:0045174: glutathione dehydrogenase (ascorbate) activity1.65E-03
41GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.65E-03
42GO:0010277: chlorophyllide a oxygenase [overall] activity1.65E-03
43GO:0070330: aromatase activity1.65E-03
44GO:0050734: hydroxycinnamoyltransferase activity1.65E-03
45GO:0004148: dihydrolipoyl dehydrogenase activity1.65E-03
46GO:0004089: carbonate dehydratase activity1.76E-03
47GO:0031072: heat shock protein binding1.76E-03
48GO:0016798: hydrolase activity, acting on glycosyl bonds1.77E-03
49GO:0035250: UDP-galactosyltransferase activity2.39E-03
50GO:0003830: beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity2.39E-03
51GO:0043495: protein anchor3.22E-03
52GO:0046556: alpha-L-arabinofuranosidase activity3.22E-03
53GO:0015204: urea transmembrane transporter activity3.22E-03
54GO:0015120: phosphoglycerate transmembrane transporter activity3.22E-03
55GO:0004659: prenyltransferase activity3.22E-03
56GO:0001053: plastid sigma factor activity3.22E-03
57GO:0004345: glucose-6-phosphate dehydrogenase activity3.22E-03
58GO:0016987: sigma factor activity3.22E-03
59GO:0009044: xylan 1,4-beta-xylosidase activity3.22E-03
60GO:0005253: anion channel activity3.22E-03
61GO:0030570: pectate lyase activity3.99E-03
62GO:0016651: oxidoreductase activity, acting on NAD(P)H4.13E-03
63GO:0008725: DNA-3-methyladenine glycosylase activity4.13E-03
64GO:0009922: fatty acid elongase activity4.13E-03
65GO:0003959: NADPH dehydrogenase activity4.13E-03
66GO:0018685: alkane 1-monooxygenase activity4.13E-03
67GO:0016773: phosphotransferase activity, alcohol group as acceptor4.13E-03
68GO:0003727: single-stranded RNA binding4.34E-03
69GO:0003756: protein disulfide isomerase activity4.34E-03
70GO:0016688: L-ascorbate peroxidase activity5.11E-03
71GO:0004366: glycerol-3-phosphate O-acyltransferase activity5.11E-03
72GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity5.11E-03
73GO:0008519: ammonium transmembrane transporter activity5.11E-03
74GO:0005247: voltage-gated chloride channel activity5.11E-03
75GO:0016208: AMP binding5.11E-03
76GO:0004124: cysteine synthase activity6.17E-03
77GO:0033743: peptide-methionine (R)-S-oxide reductase activity6.17E-03
78GO:0045330: aspartyl esterase activity6.31E-03
79GO:0048038: quinone binding6.79E-03
80GO:0019899: enzyme binding7.30E-03
81GO:0004601: peroxidase activity7.90E-03
82GO:0030599: pectinesterase activity8.05E-03
83GO:0016788: hydrolase activity, acting on ester bonds8.13E-03
84GO:0004564: beta-fructofuranosidase activity8.49E-03
85GO:0051082: unfolded protein binding8.69E-03
86GO:0016722: oxidoreductase activity, oxidizing metal ions8.76E-03
87GO:0016597: amino acid binding9.30E-03
88GO:0016168: chlorophyll binding1.04E-02
89GO:0008889: glycerophosphodiester phosphodiesterase activity1.11E-02
90GO:0102483: scopolin beta-glucosidase activity1.16E-02
91GO:0015112: nitrate transmembrane transporter activity1.25E-02
92GO:0004575: sucrose alpha-glucosidase activity1.25E-02
93GO:0052689: carboxylic ester hydrolase activity1.27E-02
94GO:0004805: trehalose-phosphatase activity1.39E-02
95GO:0046961: proton-transporting ATPase activity, rotational mechanism1.54E-02
96GO:0005509: calcium ion binding1.65E-02
97GO:0003993: acid phosphatase activity1.71E-02
98GO:0008422: beta-glucosidase activity1.79E-02
99GO:0050661: NADP binding1.87E-02
100GO:0004364: glutathione transferase activity2.03E-02
101GO:0004185: serine-type carboxypeptidase activity2.12E-02
102GO:0008146: sulfotransferase activity2.20E-02
103GO:0051537: 2 iron, 2 sulfur cluster binding2.29E-02
104GO:0043621: protein self-association2.29E-02
105GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.38E-02
106GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.38E-02
107GO:0031409: pigment binding2.38E-02
108GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.38E-02
109GO:0051287: NAD binding2.57E-02
110GO:0003690: double-stranded DNA binding2.96E-02
111GO:0016491: oxidoreductase activity3.22E-02
112GO:0022891: substrate-specific transmembrane transporter activity3.33E-02
113GO:0008514: organic anion transmembrane transporter activity3.54E-02
114GO:0004650: polygalacturonase activity3.71E-02
115GO:0046933: proton-transporting ATP synthase activity, rotational mechanism4.17E-02
116GO:0016746: transferase activity, transferring acyl groups4.18E-02
117GO:0010181: FMN binding4.39E-02
118GO:0005355: glucose transmembrane transporter activity4.39E-02
RankGO TermAdjusted P value
1GO:0044391: ribosomal subunit0.00E+00
2GO:0009575: chromoplast stroma0.00E+00
3GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
4GO:0009507: chloroplast6.00E-45
5GO:0009535: chloroplast thylakoid membrane1.25E-32
6GO:0009941: chloroplast envelope6.46E-32
7GO:0009570: chloroplast stroma6.09E-30
8GO:0009543: chloroplast thylakoid lumen1.47E-25
9GO:0009534: chloroplast thylakoid3.75E-23
10GO:0009579: thylakoid6.14E-22
11GO:0031977: thylakoid lumen8.82E-18
12GO:0005840: ribosome1.69E-13
13GO:0009505: plant-type cell wall8.54E-12
14GO:0048046: apoplast1.20E-08
15GO:0009654: photosystem II oxygen evolving complex1.47E-08
16GO:0019898: extrinsic component of membrane1.81E-07
17GO:0030095: chloroplast photosystem II1.87E-07
18GO:0005618: cell wall6.47E-07
19GO:0031225: anchored component of membrane6.63E-07
20GO:0016020: membrane1.52E-06
21GO:0031969: chloroplast membrane2.68E-05
22GO:0010007: magnesium chelatase complex3.33E-05
23GO:0046658: anchored component of plasma membrane5.91E-05
24GO:0000311: plastid large ribosomal subunit1.21E-04
25GO:0005576: extracellular region2.61E-04
26GO:0009706: chloroplast inner membrane3.38E-04
27GO:0015935: small ribosomal subunit3.64E-04
28GO:0043674: columella4.70E-04
29GO:0042807: central vacuole4.70E-04
30GO:0042170: plastid membrane1.01E-03
31GO:0009295: nucleoid1.24E-03
32GO:0005774: vacuolar membrane1.51E-03
33GO:0009509: chromoplast1.65E-03
34GO:0000312: plastid small ribosomal subunit1.98E-03
35GO:0005775: vacuolar lumen2.39E-03
36GO:0042646: plastid nucleoid2.39E-03
37GO:0042651: thylakoid membrane3.04E-03
38GO:0009705: plant-type vacuole membrane4.06E-03
39GO:0000220: vacuolar proton-transporting V-type ATPase, V0 domain4.13E-03
40GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1)5.11E-03
41GO:0034707: chloride channel complex5.11E-03
42GO:0009522: photosystem I5.91E-03
43GO:0016363: nuclear matrix6.17E-03
44GO:0009523: photosystem II6.34E-03
45GO:0009533: chloroplast stromal thylakoid7.30E-03
46GO:0010319: stromule8.76E-03
47GO:0000326: protein storage vacuole9.75E-03
48GO:0010287: plastoglobule1.08E-02
49GO:0005763: mitochondrial small ribosomal subunit1.11E-02
50GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)1.11E-02
51GO:0008180: COP9 signalosome1.11E-02
52GO:0022625: cytosolic large ribosomal subunit1.18E-02
53GO:0005773: vacuole1.22E-02
54GO:0015934: large ribosomal subunit1.49E-02
55GO:0009508: plastid chromosome1.86E-02
56GO:0030076: light-harvesting complex2.20E-02
57GO:0009506: plasmodesma2.24E-02
58GO:0005887: integral component of plasma membrane3.10E-02
59GO:0022626: cytosolic ribosome4.28E-02
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Gene type



Gene DE type