Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G41740

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0072660: maintenance of protein location in plasma membrane0.00E+00
2GO:0071327: cellular response to trehalose stimulus0.00E+00
3GO:0070212: protein poly-ADP-ribosylation0.00E+00
4GO:0045792: negative regulation of cell size0.00E+00
5GO:1900367: positive regulation of defense response to insect0.00E+00
6GO:0009992: cellular water homeostasis0.00E+00
7GO:0051553: flavone biosynthetic process0.00E+00
8GO:0006468: protein phosphorylation1.11E-09
9GO:0009617: response to bacterium7.12E-09
10GO:0080142: regulation of salicylic acid biosynthetic process6.78E-08
11GO:0009751: response to salicylic acid2.14E-07
12GO:0009626: plant-type hypersensitive response2.50E-07
13GO:0010942: positive regulation of cell death3.05E-07
14GO:0010618: aerenchyma formation1.08E-06
15GO:0031349: positive regulation of defense response1.08E-06
16GO:0051707: response to other organism1.56E-06
17GO:0042742: defense response to bacterium2.96E-06
18GO:0009816: defense response to bacterium, incompatible interaction8.62E-06
19GO:0000187: activation of MAPK activity9.39E-06
20GO:0009627: systemic acquired resistance9.67E-06
21GO:0070588: calcium ion transmembrane transport1.62E-05
22GO:0007166: cell surface receptor signaling pathway4.29E-05
23GO:0010310: regulation of hydrogen peroxide metabolic process6.00E-05
24GO:0006952: defense response6.90E-05
25GO:0046470: phosphatidylcholine metabolic process8.05E-05
26GO:2000031: regulation of salicylic acid mediated signaling pathway1.30E-04
27GO:0051245: negative regulation of cellular defense response1.48E-04
28GO:0009609: response to symbiotic bacterium1.48E-04
29GO:0006643: membrane lipid metabolic process1.48E-04
30GO:0055081: anion homeostasis1.48E-04
31GO:1901183: positive regulation of camalexin biosynthetic process1.48E-04
32GO:0060862: negative regulation of floral organ abscission1.48E-04
33GO:1900426: positive regulation of defense response to bacterium1.92E-04
34GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.92E-04
35GO:0043069: negative regulation of programmed cell death2.27E-04
36GO:0010150: leaf senescence3.10E-04
37GO:0080151: positive regulation of salicylic acid mediated signaling pathway3.38E-04
38GO:0080185: effector dependent induction by symbiont of host immune response3.38E-04
39GO:0006212: uracil catabolic process3.38E-04
40GO:0019483: beta-alanine biosynthetic process3.38E-04
41GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine3.38E-04
42GO:0002221: pattern recognition receptor signaling pathway3.38E-04
43GO:0072661: protein targeting to plasma membrane5.54E-04
44GO:0006517: protein deglycosylation5.54E-04
45GO:0048281: inflorescence morphogenesis5.54E-04
46GO:0010581: regulation of starch biosynthetic process5.54E-04
47GO:0006954: inflammatory response5.54E-04
48GO:1900140: regulation of seedling development5.54E-04
49GO:0050832: defense response to fungus5.54E-04
50GO:0016998: cell wall macromolecule catabolic process6.55E-04
51GO:0006979: response to oxidative stress7.02E-04
52GO:0009814: defense response, incompatible interaction7.15E-04
53GO:2000022: regulation of jasmonic acid mediated signaling pathway7.15E-04
54GO:0031348: negative regulation of defense response7.15E-04
55GO:0009625: response to insect7.78E-04
56GO:0009311: oligosaccharide metabolic process7.93E-04
57GO:0002239: response to oomycetes7.93E-04
58GO:0043207: response to external biotic stimulus7.93E-04
59GO:0010148: transpiration7.93E-04
60GO:0006516: glycoprotein catabolic process7.93E-04
61GO:0006612: protein targeting to membrane7.93E-04
62GO:0015696: ammonium transport7.93E-04
63GO:0006515: misfolded or incompletely synthesized protein catabolic process7.93E-04
64GO:0009620: response to fungus9.24E-04
65GO:0060548: negative regulation of cell death1.05E-03
66GO:0072488: ammonium transmembrane transport1.05E-03
67GO:0010363: regulation of plant-type hypersensitive response1.05E-03
68GO:0071219: cellular response to molecule of bacterial origin1.05E-03
69GO:2000038: regulation of stomatal complex development1.05E-03
70GO:0010188: response to microbial phytotoxin1.05E-03
71GO:0061025: membrane fusion1.13E-03
72GO:0002229: defense response to oomycetes1.29E-03
73GO:0010193: response to ozone1.29E-03
74GO:0000302: response to reactive oxygen species1.29E-03
75GO:0010225: response to UV-C1.33E-03
76GO:0000304: response to singlet oxygen1.33E-03
77GO:0005513: detection of calcium ion1.33E-03
78GO:0031365: N-terminal protein amino acid modification1.33E-03
79GO:0030163: protein catabolic process1.46E-03
80GO:0060918: auxin transport1.63E-03
81GO:0001666: response to hypoxia1.85E-03
82GO:2000037: regulation of stomatal complex patterning1.96E-03
83GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.96E-03
84GO:0000911: cytokinesis by cell plate formation1.96E-03
85GO:0009612: response to mechanical stimulus1.96E-03
86GO:0010044: response to aluminum ion2.30E-03
87GO:0010161: red light signaling pathway2.30E-03
88GO:0009610: response to symbiotic fungus2.30E-03
89GO:0043090: amino acid import2.30E-03
90GO:0071446: cellular response to salicylic acid stimulus2.30E-03
91GO:0050829: defense response to Gram-negative bacterium2.30E-03
92GO:0070370: cellular heat acclimation2.30E-03
93GO:0009813: flavonoid biosynthetic process2.52E-03
94GO:0009787: regulation of abscisic acid-activated signaling pathway2.66E-03
95GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline2.66E-03
96GO:0030162: regulation of proteolysis2.66E-03
97GO:0010119: regulation of stomatal movement2.77E-03
98GO:0006002: fructose 6-phosphate metabolic process3.04E-03
99GO:0010497: plasmodesmata-mediated intercellular transport3.04E-03
100GO:0043562: cellular response to nitrogen levels3.04E-03
101GO:0010112: regulation of systemic acquired resistance3.44E-03
102GO:0006887: exocytosis3.60E-03
103GO:2000280: regulation of root development3.86E-03
104GO:0010215: cellulose microfibril organization4.29E-03
105GO:0006995: cellular response to nitrogen starvation4.29E-03
106GO:0009870: defense response signaling pathway, resistance gene-dependent4.29E-03
107GO:0006032: chitin catabolic process4.29E-03
108GO:0009409: response to cold4.67E-03
109GO:0000165: MAPK cascade4.72E-03
110GO:0010200: response to chitin4.88E-03
111GO:0002213: defense response to insect5.20E-03
112GO:0010105: negative regulation of ethylene-activated signaling pathway5.20E-03
113GO:0006829: zinc II ion transport5.68E-03
114GO:0006807: nitrogen compound metabolic process5.68E-03
115GO:0010229: inflorescence development5.68E-03
116GO:0034605: cellular response to heat6.17E-03
117GO:0009969: xyloglucan biosynthetic process6.67E-03
118GO:0016042: lipid catabolic process7.40E-03
119GO:0009651: response to salt stress7.47E-03
120GO:0006629: lipid metabolic process7.67E-03
121GO:0009863: salicylic acid mediated signaling pathway7.74E-03
122GO:0048278: vesicle docking8.85E-03
123GO:0030433: ubiquitin-dependent ERAD pathway9.43E-03
124GO:0010227: floral organ abscission1.00E-02
125GO:0009737: response to abscisic acid1.03E-02
126GO:0019722: calcium-mediated signaling1.06E-02
127GO:0009789: positive regulation of abscisic acid-activated signaling pathway1.13E-02
128GO:0042631: cellular response to water deprivation1.19E-02
129GO:0010051: xylem and phloem pattern formation1.19E-02
130GO:0010197: polar nucleus fusion1.25E-02
131GO:0009646: response to absence of light1.32E-02
132GO:0006623: protein targeting to vacuole1.39E-02
133GO:0010183: pollen tube guidance1.39E-02
134GO:0006904: vesicle docking involved in exocytosis1.74E-02
135GO:0051607: defense response to virus1.81E-02
136GO:0009615: response to virus1.89E-02
137GO:0006508: proteolysis1.93E-02
138GO:0006906: vesicle fusion2.04E-02
139GO:0006950: response to stress2.12E-02
140GO:0016049: cell growth2.20E-02
141GO:0009817: defense response to fungus, incompatible interaction2.28E-02
142GO:0008219: cell death2.28E-02
143GO:0009723: response to ethylene2.32E-02
144GO:0009832: plant-type cell wall biogenesis2.36E-02
145GO:0009407: toxin catabolic process2.45E-02
146GO:0007568: aging2.53E-02
147GO:0009631: cold acclimation2.53E-02
148GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.58E-02
149GO:0006865: amino acid transport2.61E-02
150GO:0016192: vesicle-mediated transport2.62E-02
151GO:0009867: jasmonic acid mediated signaling pathway2.70E-02
152GO:0006099: tricarboxylic acid cycle2.79E-02
153GO:0009636: response to toxic substance3.51E-02
154GO:0009965: leaf morphogenesis3.51E-02
155GO:0031347: regulation of defense response3.71E-02
156GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process3.71E-02
157GO:0009414: response to water deprivation3.73E-02
158GO:0006812: cation transport3.80E-02
159GO:0006486: protein glycosylation4.00E-02
160GO:0010224: response to UV-B4.10E-02
161GO:0006096: glycolytic process4.50E-02
RankGO TermAdjusted P value
1GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
2GO:0033759: flavone synthase activity0.00E+00
3GO:0015370: solute:sodium symporter activity0.00E+00
4GO:0003837: beta-ureidopropionase activity0.00E+00
5GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
6GO:0005212: structural constituent of eye lens0.00E+00
7GO:0016301: kinase activity9.95E-09
8GO:0004674: protein serine/threonine kinase activity2.46E-08
9GO:0005524: ATP binding6.95E-07
10GO:0005516: calmodulin binding8.91E-06
11GO:0005388: calcium-transporting ATPase activity1.08E-05
12GO:0004714: transmembrane receptor protein tyrosine kinase activity1.04E-04
13GO:0004708: MAP kinase kinase activity1.04E-04
14GO:0005509: calcium ion binding1.23E-04
15GO:0004630: phospholipase D activity1.30E-04
16GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.30E-04
17GO:1901149: salicylic acid binding1.48E-04
18GO:0015085: calcium ion transmembrane transporter activity1.48E-04
19GO:0080042: ADP-glucose pyrophosphohydrolase activity1.48E-04
20GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity1.48E-04
21GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity1.48E-04
22GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity1.48E-04
23GO:0031127: alpha-(1,2)-fucosyltransferase activity1.48E-04
24GO:0004806: triglyceride lipase activity2.08E-04
25GO:0030247: polysaccharide binding2.08E-04
26GO:0080041: ADP-ribose pyrophosphohydrolase activity3.38E-04
27GO:0017110: nucleoside-diphosphatase activity3.38E-04
28GO:0004190: aspartic-type endopeptidase activity4.40E-04
29GO:0031625: ubiquitin protein ligase binding7.58E-04
30GO:0043495: protein anchor1.05E-03
31GO:0009044: xylan 1,4-beta-xylosidase activity1.05E-03
32GO:0015204: urea transmembrane transporter activity1.05E-03
33GO:0045431: flavonol synthase activity1.33E-03
34GO:0005546: phosphatidylinositol-4,5-bisphosphate binding1.33E-03
35GO:0047631: ADP-ribose diphosphatase activity1.33E-03
36GO:0008519: ammonium transmembrane transporter activity1.63E-03
37GO:0030976: thiamine pyrophosphate binding1.63E-03
38GO:0000210: NAD+ diphosphatase activity1.63E-03
39GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity1.65E-03
40GO:0005515: protein binding1.67E-03
41GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.87E-03
42GO:0004012: phospholipid-translocating ATPase activity1.96E-03
43GO:0004656: procollagen-proline 4-dioxygenase activity1.96E-03
44GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity2.30E-03
45GO:0008235: metalloexopeptidase activity2.30E-03
46GO:0003872: 6-phosphofructokinase activity2.30E-03
47GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.03E-03
48GO:0008417: fucosyltransferase activity3.44E-03
49GO:0005484: SNAP receptor activity3.90E-03
50GO:0004568: chitinase activity4.29E-03
51GO:0004713: protein tyrosine kinase activity4.29E-03
52GO:0015293: symporter activity4.38E-03
53GO:0046872: metal ion binding4.68E-03
54GO:0004177: aminopeptidase activity4.73E-03
55GO:0016298: lipase activity5.43E-03
56GO:0031072: heat shock protein binding5.68E-03
57GO:0005262: calcium channel activity5.68E-03
58GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism5.68E-03
59GO:0008061: chitin binding6.67E-03
60GO:0003712: transcription cofactor activity6.67E-03
61GO:0031418: L-ascorbic acid binding7.74E-03
62GO:0008324: cation transmembrane transporter activity8.29E-03
63GO:0033612: receptor serine/threonine kinase binding8.85E-03
64GO:0008810: cellulase activity1.00E-02
65GO:0046873: metal ion transmembrane transporter activity1.25E-02
66GO:0004672: protein kinase activity1.88E-02
67GO:0009931: calcium-dependent protein serine/threonine kinase activity2.04E-02
68GO:0004683: calmodulin-dependent protein kinase activity2.12E-02
69GO:0004721: phosphoprotein phosphatase activity2.12E-02
70GO:0004222: metalloendopeptidase activity2.45E-02
71GO:0030145: manganese ion binding2.53E-02
72GO:0050897: cobalt ion binding2.53E-02
73GO:0000149: SNARE binding2.87E-02
74GO:0004871: signal transducer activity3.12E-02
75GO:0004364: glutathione transferase activity3.14E-02
76GO:0051287: NAD binding3.71E-02
77GO:0015171: amino acid transmembrane transporter activity4.30E-02
78GO:0045330: aspartyl esterase activity4.30E-02
79GO:0045735: nutrient reservoir activity4.50E-02
80GO:0030599: pectinesterase activity4.92E-02
81GO:0022857: transmembrane transporter activity4.92E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane6.30E-14
2GO:0016021: integral component of membrane3.12E-07
3GO:0045252: oxoglutarate dehydrogenase complex1.48E-04
4GO:0009506: plasmodesma1.48E-04
5GO:0005887: integral component of plasma membrane4.99E-04
6GO:0030658: transport vesicle membrane7.93E-04
7GO:0070062: extracellular exosome7.93E-04
8GO:0009504: cell plate1.21E-03
9GO:0005945: 6-phosphofructokinase complex1.33E-03
10GO:0046658: anchored component of plasma membrane2.92E-03
11GO:0030665: clathrin-coated vesicle membrane3.86E-03
12GO:0017119: Golgi transport complex4.29E-03
13GO:0005578: proteinaceous extracellular matrix5.68E-03
14GO:0031012: extracellular matrix5.68E-03
15GO:0031225: anchored component of membrane7.12E-03
16GO:0000145: exocyst1.52E-02
17GO:0071944: cell periphery1.59E-02
18GO:0032580: Golgi cisterna membrane1.67E-02
19GO:0019005: SCF ubiquitin ligase complex2.28E-02
20GO:0000151: ubiquitin ligase complex2.28E-02
21GO:0005774: vacuolar membrane2.36E-02
22GO:0005737: cytoplasm2.51E-02
23GO:0005802: trans-Golgi network2.87E-02
24GO:0005618: cell wall2.96E-02
25GO:0016020: membrane3.00E-02
26GO:0031201: SNARE complex3.05E-02
27GO:0031902: late endosome membrane3.05E-02
28GO:0090406: pollen tube3.23E-02
29GO:0005794: Golgi apparatus3.64E-02
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Gene type



Gene DE type