GO Enrichment Analysis of Co-expressed Genes with
AT5G40770
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019918: peptidyl-arginine methylation, to symmetrical-dimethyl arginine | 0.00E+00 |
| 2 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 3 | GO:0019307: mannose biosynthetic process | 0.00E+00 |
| 4 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 5 | GO:0071433: cell wall repair | 0.00E+00 |
| 6 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 7 | GO:0034050: host programmed cell death induced by symbiont | 0.00E+00 |
| 8 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 9 | GO:0045047: protein targeting to ER | 0.00E+00 |
| 10 | GO:0009304: tRNA transcription | 0.00E+00 |
| 11 | GO:0031564: transcription antitermination | 0.00E+00 |
| 12 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 13 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 14 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 15 | GO:0006412: translation | 8.67E-11 |
| 16 | GO:0042254: ribosome biogenesis | 6.74E-10 |
| 17 | GO:0006364: rRNA processing | 8.03E-09 |
| 18 | GO:0045041: protein import into mitochondrial intermembrane space | 3.44E-07 |
| 19 | GO:0046686: response to cadmium ion | 5.64E-06 |
| 20 | GO:0031167: rRNA methylation | 1.01E-05 |
| 21 | GO:0006458: 'de novo' protein folding | 2.20E-05 |
| 22 | GO:0042026: protein refolding | 2.20E-05 |
| 23 | GO:0001510: RNA methylation | 5.02E-05 |
| 24 | GO:0006189: 'de novo' IMP biosynthetic process | 6.25E-05 |
| 25 | GO:0006626: protein targeting to mitochondrion | 1.45E-04 |
| 26 | GO:0010220: positive regulation of vernalization response | 1.89E-04 |
| 27 | GO:0045905: positive regulation of translational termination | 1.89E-04 |
| 28 | GO:0045901: positive regulation of translational elongation | 1.89E-04 |
| 29 | GO:0006452: translational frameshifting | 1.89E-04 |
| 30 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.89E-04 |
| 31 | GO:0006334: nucleosome assembly | 2.86E-04 |
| 32 | GO:0061077: chaperone-mediated protein folding | 2.86E-04 |
| 33 | GO:0007005: mitochondrion organization | 3.14E-04 |
| 34 | GO:0006954: inflammatory response | 3.17E-04 |
| 35 | GO:1902626: assembly of large subunit precursor of preribosome | 3.17E-04 |
| 36 | GO:0045039: protein import into mitochondrial inner membrane | 3.17E-04 |
| 37 | GO:0006013: mannose metabolic process | 3.17E-04 |
| 38 | GO:0006556: S-adenosylmethionine biosynthetic process | 3.17E-04 |
| 39 | GO:0008033: tRNA processing | 4.36E-04 |
| 40 | GO:0009113: purine nucleobase biosynthetic process | 4.58E-04 |
| 41 | GO:0006986: response to unfolded protein | 4.58E-04 |
| 42 | GO:0009298: GDP-mannose biosynthetic process | 4.58E-04 |
| 43 | GO:0070301: cellular response to hydrogen peroxide | 4.58E-04 |
| 44 | GO:0051085: chaperone mediated protein folding requiring cofactor | 4.58E-04 |
| 45 | GO:0006241: CTP biosynthetic process | 4.58E-04 |
| 46 | GO:0006165: nucleoside diphosphate phosphorylation | 4.58E-04 |
| 47 | GO:0006228: UTP biosynthetic process | 4.58E-04 |
| 48 | GO:0006164: purine nucleotide biosynthetic process | 4.58E-04 |
| 49 | GO:0009855: determination of bilateral symmetry | 4.58E-04 |
| 50 | GO:0051131: chaperone-mediated protein complex assembly | 4.58E-04 |
| 51 | GO:0000460: maturation of 5.8S rRNA | 6.09E-04 |
| 52 | GO:0006183: GTP biosynthetic process | 6.09E-04 |
| 53 | GO:0042273: ribosomal large subunit biogenesis | 6.09E-04 |
| 54 | GO:0006413: translational initiation | 6.54E-04 |
| 55 | GO:0009793: embryo development ending in seed dormancy | 6.59E-04 |
| 56 | GO:0009735: response to cytokinin | 8.73E-04 |
| 57 | GO:0000470: maturation of LSU-rRNA | 9.42E-04 |
| 58 | GO:0016444: somatic cell DNA recombination | 1.12E-03 |
| 59 | GO:0009423: chorismate biosynthetic process | 1.12E-03 |
| 60 | GO:0080186: developmental vegetative growth | 1.31E-03 |
| 61 | GO:0009396: folic acid-containing compound biosynthetic process | 1.31E-03 |
| 62 | GO:0009651: response to salt stress | 1.36E-03 |
| 63 | GO:0000028: ribosomal small subunit assembly | 1.51E-03 |
| 64 | GO:0042255: ribosome assembly | 1.51E-03 |
| 65 | GO:0098656: anion transmembrane transport | 1.95E-03 |
| 66 | GO:0035999: tetrahydrofolate interconversion | 2.18E-03 |
| 67 | GO:0009073: aromatic amino acid family biosynthetic process | 2.66E-03 |
| 68 | GO:0012501: programmed cell death | 2.92E-03 |
| 69 | GO:0006820: anion transport | 2.92E-03 |
| 70 | GO:0010588: cotyledon vascular tissue pattern formation | 3.18E-03 |
| 71 | GO:0048467: gynoecium development | 3.45E-03 |
| 72 | GO:0006541: glutamine metabolic process | 3.45E-03 |
| 73 | GO:0019853: L-ascorbic acid biosynthetic process | 3.73E-03 |
| 74 | GO:0006487: protein N-linked glycosylation | 4.31E-03 |
| 75 | GO:0000027: ribosomal large subunit assembly | 4.31E-03 |
| 76 | GO:0006730: one-carbon metabolic process | 5.24E-03 |
| 77 | GO:0010501: RNA secondary structure unwinding | 6.57E-03 |
| 78 | GO:0000413: protein peptidyl-prolyl isomerization | 6.57E-03 |
| 79 | GO:0009617: response to bacterium | 6.59E-03 |
| 80 | GO:0010197: polar nucleus fusion | 6.92E-03 |
| 81 | GO:0009960: endosperm development | 6.92E-03 |
| 82 | GO:0010305: leaf vascular tissue pattern formation | 6.92E-03 |
| 83 | GO:0015986: ATP synthesis coupled proton transport | 7.28E-03 |
| 84 | GO:0006457: protein folding | 7.48E-03 |
| 85 | GO:0006635: fatty acid beta-oxidation | 8.01E-03 |
| 86 | GO:0010311: lateral root formation | 1.29E-02 |
| 87 | GO:0010043: response to zinc ion | 1.38E-02 |
| 88 | GO:0009631: cold acclimation | 1.38E-02 |
| 89 | GO:0000724: double-strand break repair via homologous recombination | 1.43E-02 |
| 90 | GO:0009853: photorespiration | 1.48E-02 |
| 91 | GO:0006099: tricarboxylic acid cycle | 1.52E-02 |
| 92 | GO:0009408: response to heat | 1.57E-02 |
| 93 | GO:0006839: mitochondrial transport | 1.62E-02 |
| 94 | GO:0048364: root development | 1.64E-02 |
| 95 | GO:0008283: cell proliferation | 1.77E-02 |
| 96 | GO:0009744: response to sucrose | 1.77E-02 |
| 97 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 2.02E-02 |
| 98 | GO:0009846: pollen germination | 2.08E-02 |
| 99 | GO:0009809: lignin biosynthetic process | 2.19E-02 |
| 100 | GO:0009909: regulation of flower development | 2.35E-02 |
| 101 | GO:0048367: shoot system development | 2.52E-02 |
| 102 | GO:0009553: embryo sac development | 2.75E-02 |
| 103 | GO:0009845: seed germination | 3.49E-02 |
| 104 | GO:0009790: embryo development | 3.68E-02 |
| 105 | GO:0006633: fatty acid biosynthetic process | 3.88E-02 |
| 106 | GO:0006414: translational elongation | 4.15E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 2 | GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity | 0.00E+00 |
| 3 | GO:0003922: GMP synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 4 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 5 | GO:0016018: cyclosporin A binding | 0.00E+00 |
| 6 | GO:0004615: phosphomannomutase activity | 0.00E+00 |
| 7 | GO:0004637: phosphoribosylamine-glycine ligase activity | 0.00E+00 |
| 8 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 9 | GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity | 0.00E+00 |
| 10 | GO:0003735: structural constituent of ribosome | 1.06E-13 |
| 11 | GO:0005507: copper ion binding | 8.38E-10 |
| 12 | GO:0030515: snoRNA binding | 1.91E-07 |
| 13 | GO:0003723: RNA binding | 1.00E-06 |
| 14 | GO:0008649: rRNA methyltransferase activity | 1.31E-06 |
| 15 | GO:0051082: unfolded protein binding | 2.49E-05 |
| 16 | GO:0003729: mRNA binding | 4.23E-05 |
| 17 | GO:0048037: cofactor binding | 7.90E-05 |
| 18 | GO:0042134: rRNA primary transcript binding | 7.90E-05 |
| 19 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 7.90E-05 |
| 20 | GO:0003746: translation elongation factor activity | 1.02E-04 |
| 21 | GO:0001054: RNA polymerase I activity | 1.08E-04 |
| 22 | GO:0044183: protein binding involved in protein folding | 1.08E-04 |
| 23 | GO:0001056: RNA polymerase III activity | 1.25E-04 |
| 24 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.89E-04 |
| 25 | GO:0043021: ribonucleoprotein complex binding | 1.89E-04 |
| 26 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.89E-04 |
| 27 | GO:0004478: methionine adenosyltransferase activity | 3.17E-04 |
| 28 | GO:0070180: large ribosomal subunit rRNA binding | 3.17E-04 |
| 29 | GO:0008469: histone-arginine N-methyltransferase activity | 3.17E-04 |
| 30 | GO:0004550: nucleoside diphosphate kinase activity | 4.58E-04 |
| 31 | GO:0008276: protein methyltransferase activity | 4.58E-04 |
| 32 | GO:0003743: translation initiation factor activity | 8.64E-04 |
| 33 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 9.42E-04 |
| 34 | GO:0016462: pyrophosphatase activity | 9.42E-04 |
| 35 | GO:0031369: translation initiation factor binding | 9.42E-04 |
| 36 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.06E-03 |
| 37 | GO:0008143: poly(A) binding | 1.31E-03 |
| 38 | GO:0042393: histone binding | 1.50E-03 |
| 39 | GO:0043022: ribosome binding | 1.51E-03 |
| 40 | GO:0015288: porin activity | 1.51E-03 |
| 41 | GO:0008308: voltage-gated anion channel activity | 1.72E-03 |
| 42 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.97E-03 |
| 43 | GO:0001055: RNA polymerase II activity | 2.18E-03 |
| 44 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.27E-03 |
| 45 | GO:0015114: phosphate ion transmembrane transporter activity | 3.18E-03 |
| 46 | GO:0008026: ATP-dependent helicase activity | 3.41E-03 |
| 47 | GO:0008266: poly(U) RNA binding | 3.45E-03 |
| 48 | GO:0005524: ATP binding | 3.75E-03 |
| 49 | GO:0005528: FK506 binding | 4.31E-03 |
| 50 | GO:0051087: chaperone binding | 4.61E-03 |
| 51 | GO:0000166: nucleotide binding | 5.39E-03 |
| 52 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 6.92E-03 |
| 53 | GO:0010181: FMN binding | 7.28E-03 |
| 54 | GO:0004004: ATP-dependent RNA helicase activity | 1.16E-02 |
| 55 | GO:0050897: cobalt ion binding | 1.38E-02 |
| 56 | GO:0003697: single-stranded DNA binding | 1.48E-02 |
| 57 | GO:0003924: GTPase activity | 1.57E-02 |
| 58 | GO:0051287: NAD binding | 2.02E-02 |
| 59 | GO:0003690: double-stranded DNA binding | 2.24E-02 |
| 60 | GO:0008565: protein transporter activity | 3.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 3 | GO:0005730: nucleolus | 2.46E-21 |
| 4 | GO:0005840: ribosome | 5.78E-09 |
| 5 | GO:0022625: cytosolic large ribosomal subunit | 5.27E-08 |
| 6 | GO:0005739: mitochondrion | 3.43E-07 |
| 7 | GO:0015030: Cajal body | 8.67E-07 |
| 8 | GO:0022626: cytosolic ribosome | 1.10E-06 |
| 9 | GO:0005774: vacuolar membrane | 1.49E-06 |
| 10 | GO:0032040: small-subunit processome | 1.98E-06 |
| 11 | GO:0005829: cytosol | 3.27E-06 |
| 12 | GO:0031428: box C/D snoRNP complex | 1.54E-05 |
| 13 | GO:0005747: mitochondrial respiratory chain complex I | 1.83E-05 |
| 14 | GO:0005759: mitochondrial matrix | 5.97E-05 |
| 15 | GO:0005736: DNA-directed RNA polymerase I complex | 6.25E-05 |
| 16 | GO:0005666: DNA-directed RNA polymerase III complex | 7.61E-05 |
| 17 | GO:0071541: eukaryotic translation initiation factor 3 complex, eIF3m | 7.90E-05 |
| 18 | GO:0015934: large ribosomal subunit | 8.88E-05 |
| 19 | GO:0022627: cytosolic small ribosomal subunit | 1.18E-04 |
| 20 | GO:0070545: PeBoW complex | 1.89E-04 |
| 21 | GO:0005758: mitochondrial intermembrane space | 2.34E-04 |
| 22 | GO:0009506: plasmodesma | 2.53E-04 |
| 23 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 6.09E-04 |
| 24 | GO:0005773: vacuole | 9.79E-04 |
| 25 | GO:0016363: nuclear matrix | 1.12E-03 |
| 26 | GO:0005762: mitochondrial large ribosomal subunit | 1.12E-03 |
| 27 | GO:0030687: preribosome, large subunit precursor | 1.31E-03 |
| 28 | GO:0046930: pore complex | 1.72E-03 |
| 29 | GO:0005742: mitochondrial outer membrane translocase complex | 1.72E-03 |
| 30 | GO:0005763: mitochondrial small ribosomal subunit | 1.95E-03 |
| 31 | GO:0005743: mitochondrial inner membrane | 2.38E-03 |
| 32 | GO:0000418: DNA-directed RNA polymerase IV complex | 2.41E-03 |
| 33 | GO:0005737: cytoplasm | 2.47E-03 |
| 34 | GO:0005852: eukaryotic translation initiation factor 3 complex | 2.66E-03 |
| 35 | GO:0005834: heterotrimeric G-protein complex | 2.85E-03 |
| 36 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.92E-03 |
| 37 | GO:0019013: viral nucleocapsid | 3.18E-03 |
| 38 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 3.73E-03 |
| 39 | GO:0009536: plastid | 3.94E-03 |
| 40 | GO:0005741: mitochondrial outer membrane | 4.92E-03 |
| 41 | GO:0009507: chloroplast | 7.43E-03 |
| 42 | GO:0016592: mediator complex | 8.39E-03 |
| 43 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 9.37E-03 |
| 44 | GO:0009570: chloroplast stroma | 1.62E-02 |
| 45 | GO:0005618: cell wall | 2.31E-02 |
| 46 | GO:0016020: membrane | 2.71E-02 |
| 47 | GO:0009941: chloroplast envelope | 2.97E-02 |
| 48 | GO:0005732: small nucleolar ribonucleoprotein complex | 2.99E-02 |
| 49 | GO:0005654: nucleoplasm | 3.23E-02 |