GO Enrichment Analysis of Co-expressed Genes with
AT5G40580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 2 | GO:2000541: positive regulation of protein geranylgeranylation | 0.00E+00 |
| 3 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 3.32E-07 |
| 4 | GO:0034976: response to endoplasmic reticulum stress | 1.25E-05 |
| 5 | GO:0045454: cell redox homeostasis | 1.09E-04 |
| 6 | GO:0010112: regulation of systemic acquired resistance | 1.20E-04 |
| 7 | GO:0046244: salicylic acid catabolic process | 1.22E-04 |
| 8 | GO:0009270: response to humidity | 1.22E-04 |
| 9 | GO:1990641: response to iron ion starvation | 1.22E-04 |
| 10 | GO:0099132: ATP hydrolysis coupled cation transmembrane transport | 1.22E-04 |
| 11 | GO:0009700: indole phytoalexin biosynthetic process | 1.22E-04 |
| 12 | GO:0006457: protein folding | 1.49E-04 |
| 13 | GO:0046686: response to cadmium ion | 2.32E-04 |
| 14 | GO:0009617: response to bacterium | 2.67E-04 |
| 15 | GO:0006101: citrate metabolic process | 2.82E-04 |
| 16 | GO:0015865: purine nucleotide transport | 2.82E-04 |
| 17 | GO:0019725: cellular homeostasis | 2.82E-04 |
| 18 | GO:0042742: defense response to bacterium | 3.97E-04 |
| 19 | GO:0045793: positive regulation of cell size | 4.65E-04 |
| 20 | GO:0010186: positive regulation of cellular defense response | 4.65E-04 |
| 21 | GO:0002679: respiratory burst involved in defense response | 6.66E-04 |
| 22 | GO:0010116: positive regulation of abscisic acid biosynthetic process | 6.66E-04 |
| 23 | GO:0002239: response to oomycetes | 6.66E-04 |
| 24 | GO:0046902: regulation of mitochondrial membrane permeability | 6.66E-04 |
| 25 | GO:0080037: negative regulation of cytokinin-activated signaling pathway | 8.84E-04 |
| 26 | GO:0060548: negative regulation of cell death | 8.84E-04 |
| 27 | GO:0046345: abscisic acid catabolic process | 8.84E-04 |
| 28 | GO:0045088: regulation of innate immune response | 8.84E-04 |
| 29 | GO:0000304: response to singlet oxygen | 1.12E-03 |
| 30 | GO:0009697: salicylic acid biosynthetic process | 1.12E-03 |
| 31 | GO:2000762: regulation of phenylpropanoid metabolic process | 1.12E-03 |
| 32 | GO:0006097: glyoxylate cycle | 1.12E-03 |
| 33 | GO:0018344: protein geranylgeranylation | 1.12E-03 |
| 34 | GO:0030163: protein catabolic process | 1.13E-03 |
| 35 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.37E-03 |
| 36 | GO:0010405: arabinogalactan protein metabolic process | 1.37E-03 |
| 37 | GO:0010256: endomembrane system organization | 1.37E-03 |
| 38 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.37E-03 |
| 39 | GO:0010150: leaf senescence | 1.46E-03 |
| 40 | GO:1902074: response to salt | 1.92E-03 |
| 41 | GO:1900056: negative regulation of leaf senescence | 1.92E-03 |
| 42 | GO:0009407: toxin catabolic process | 2.03E-03 |
| 43 | GO:0030091: protein repair | 2.22E-03 |
| 44 | GO:0006102: isocitrate metabolic process | 2.22E-03 |
| 45 | GO:0009819: drought recovery | 2.22E-03 |
| 46 | GO:0030162: regulation of proteolysis | 2.22E-03 |
| 47 | GO:0010120: camalexin biosynthetic process | 2.54E-03 |
| 48 | GO:0009808: lignin metabolic process | 2.54E-03 |
| 49 | GO:0009699: phenylpropanoid biosynthetic process | 2.54E-03 |
| 50 | GO:0006468: protein phosphorylation | 2.82E-03 |
| 51 | GO:0051865: protein autoubiquitination | 2.87E-03 |
| 52 | GO:0046685: response to arsenic-containing substance | 2.87E-03 |
| 53 | GO:0043067: regulation of programmed cell death | 3.21E-03 |
| 54 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 3.21E-03 |
| 55 | GO:0009636: response to toxic substance | 3.36E-03 |
| 56 | GO:0010200: response to chitin | 3.47E-03 |
| 57 | GO:0006855: drug transmembrane transport | 3.48E-03 |
| 58 | GO:0007064: mitotic sister chromatid cohesion | 3.57E-03 |
| 59 | GO:0009688: abscisic acid biosynthetic process | 3.57E-03 |
| 60 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.82E-03 |
| 61 | GO:0006486: protein glycosylation | 4.02E-03 |
| 62 | GO:0015706: nitrate transport | 4.32E-03 |
| 63 | GO:0006790: sulfur compound metabolic process | 4.32E-03 |
| 64 | GO:0002213: defense response to insect | 4.32E-03 |
| 65 | GO:0009626: plant-type hypersensitive response | 5.05E-03 |
| 66 | GO:0009266: response to temperature stimulus | 5.12E-03 |
| 67 | GO:0002237: response to molecule of bacterial origin | 5.12E-03 |
| 68 | GO:0009751: response to salicylic acid | 5.34E-03 |
| 69 | GO:0070588: calcium ion transmembrane transport | 5.54E-03 |
| 70 | GO:0046854: phosphatidylinositol phosphorylation | 5.54E-03 |
| 71 | GO:0010167: response to nitrate | 5.54E-03 |
| 72 | GO:0009624: response to nematode | 5.71E-03 |
| 73 | GO:0055114: oxidation-reduction process | 6.00E-03 |
| 74 | GO:2000377: regulation of reactive oxygen species metabolic process | 6.42E-03 |
| 75 | GO:0009863: salicylic acid mediated signaling pathway | 6.42E-03 |
| 76 | GO:0006979: response to oxidative stress | 7.09E-03 |
| 77 | GO:0030433: ubiquitin-dependent ERAD pathway | 7.81E-03 |
| 78 | GO:0031348: negative regulation of defense response | 7.81E-03 |
| 79 | GO:0071456: cellular response to hypoxia | 7.81E-03 |
| 80 | GO:0019748: secondary metabolic process | 7.81E-03 |
| 81 | GO:0009411: response to UV | 8.30E-03 |
| 82 | GO:0009625: response to insect | 8.30E-03 |
| 83 | GO:0010584: pollen exine formation | 8.80E-03 |
| 84 | GO:0010118: stomatal movement | 9.83E-03 |
| 85 | GO:0015031: protein transport | 1.01E-02 |
| 86 | GO:0048868: pollen tube development | 1.04E-02 |
| 87 | GO:0009851: auxin biosynthetic process | 1.15E-02 |
| 88 | GO:0006952: defense response | 1.17E-02 |
| 89 | GO:0000302: response to reactive oxygen species | 1.20E-02 |
| 90 | GO:0080156: mitochondrial mRNA modification | 1.20E-02 |
| 91 | GO:0002229: defense response to oomycetes | 1.20E-02 |
| 92 | GO:0010193: response to ozone | 1.20E-02 |
| 93 | GO:0007264: small GTPase mediated signal transduction | 1.26E-02 |
| 94 | GO:0009567: double fertilization forming a zygote and endosperm | 1.38E-02 |
| 95 | GO:0010252: auxin homeostasis | 1.38E-02 |
| 96 | GO:0009615: response to virus | 1.56E-02 |
| 97 | GO:0009816: defense response to bacterium, incompatible interaction | 1.62E-02 |
| 98 | GO:0006970: response to osmotic stress | 1.65E-02 |
| 99 | GO:0042128: nitrate assimilation | 1.69E-02 |
| 100 | GO:0016311: dephosphorylation | 1.82E-02 |
| 101 | GO:0008219: cell death | 1.88E-02 |
| 102 | GO:0009817: defense response to fungus, incompatible interaction | 1.88E-02 |
| 103 | GO:0048527: lateral root development | 2.09E-02 |
| 104 | GO:0010043: response to zinc ion | 2.09E-02 |
| 105 | GO:0007568: aging | 2.09E-02 |
| 106 | GO:0009737: response to abscisic acid | 2.19E-02 |
| 107 | GO:0045087: innate immune response | 2.23E-02 |
| 108 | GO:0006099: tricarboxylic acid cycle | 2.30E-02 |
| 109 | GO:0006886: intracellular protein transport | 2.35E-02 |
| 110 | GO:0006839: mitochondrial transport | 2.44E-02 |
| 111 | GO:0042542: response to hydrogen peroxide | 2.59E-02 |
| 112 | GO:0009414: response to water deprivation | 2.67E-02 |
| 113 | GO:0032259: methylation | 2.69E-02 |
| 114 | GO:0009408: response to heat | 2.81E-02 |
| 115 | GO:0031347: regulation of defense response | 3.06E-02 |
| 116 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.06E-02 |
| 117 | GO:0008152: metabolic process | 3.09E-02 |
| 118 | GO:0009846: pollen germination | 3.14E-02 |
| 119 | GO:0009909: regulation of flower development | 3.55E-02 |
| 120 | GO:0006417: regulation of translation | 3.55E-02 |
| 121 | GO:0006096: glycolytic process | 3.72E-02 |
| 122 | GO:0048316: seed development | 3.80E-02 |
| 123 | GO:0009620: response to fungus | 3.98E-02 |
| 124 | GO:0009553: embryo sac development | 4.15E-02 |
| 125 | GO:0018105: peptidyl-serine phosphorylation | 4.33E-02 |
| 126 | GO:0009738: abscisic acid-activated signaling pathway | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016312: inositol bisphosphate phosphatase activity | 0.00E+00 |
| 2 | GO:0032442: phenylcoumaran benzylic ether reductase activity | 0.00E+00 |
| 3 | GO:0050269: coniferyl-aldehyde dehydrogenase activity | 0.00E+00 |
| 4 | GO:0010298: dihydrocamalexic acid decarboxylase activity | 0.00E+00 |
| 5 | GO:0005092: GDP-dissociation inhibitor activity | 0.00E+00 |
| 6 | GO:0003756: protein disulfide isomerase activity | 3.21E-05 |
| 7 | GO:0008517: folic acid transporter activity | 2.82E-04 |
| 8 | GO:0003994: aconitate hydratase activity | 2.82E-04 |
| 9 | GO:0004364: glutathione transferase activity | 3.07E-04 |
| 10 | GO:0016301: kinase activity | 3.85E-04 |
| 11 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 4.65E-04 |
| 12 | GO:0000030: mannosyltransferase activity | 4.65E-04 |
| 13 | GO:0005093: Rab GDP-dissociation inhibitor activity | 4.65E-04 |
| 14 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.65E-04 |
| 15 | GO:0004298: threonine-type endopeptidase activity | 5.06E-04 |
| 16 | GO:0005524: ATP binding | 6.46E-04 |
| 17 | GO:0010178: IAA-amino acid conjugate hydrolase activity | 6.66E-04 |
| 18 | GO:0004031: aldehyde oxidase activity | 8.84E-04 |
| 19 | GO:0050302: indole-3-acetaldehyde oxidase activity | 8.84E-04 |
| 20 | GO:0010279: indole-3-acetic acid amido synthetase activity | 8.84E-04 |
| 21 | GO:0004674: protein serine/threonine kinase activity | 9.63E-04 |
| 22 | GO:0005471: ATP:ADP antiporter activity | 1.12E-03 |
| 23 | GO:0010294: abscisic acid glucosyltransferase activity | 1.12E-03 |
| 24 | GO:0017137: Rab GTPase binding | 1.12E-03 |
| 25 | GO:0008237: metallopeptidase activity | 1.27E-03 |
| 26 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.37E-03 |
| 27 | GO:0036402: proteasome-activating ATPase activity | 1.37E-03 |
| 28 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.37E-03 |
| 29 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 1.64E-03 |
| 30 | GO:0051920: peroxiredoxin activity | 1.64E-03 |
| 31 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 1.64E-03 |
| 32 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 1.64E-03 |
| 33 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.76E-03 |
| 34 | GO:0008320: protein transmembrane transporter activity | 1.92E-03 |
| 35 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.13E-03 |
| 36 | GO:0016209: antioxidant activity | 2.22E-03 |
| 37 | GO:0005544: calcium-dependent phospholipid binding | 2.22E-03 |
| 38 | GO:0050660: flavin adenine dinucleotide binding | 3.04E-03 |
| 39 | GO:0045309: protein phosphorylated amino acid binding | 3.21E-03 |
| 40 | GO:0030955: potassium ion binding | 3.21E-03 |
| 41 | GO:0015112: nitrate transmembrane transporter activity | 3.21E-03 |
| 42 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 3.21E-03 |
| 43 | GO:0004743: pyruvate kinase activity | 3.21E-03 |
| 44 | GO:0008233: peptidase activity | 3.25E-03 |
| 45 | GO:0019904: protein domain specific binding | 3.94E-03 |
| 46 | GO:0008559: xenobiotic-transporting ATPase activity | 3.94E-03 |
| 47 | GO:0004129: cytochrome-c oxidase activity | 3.94E-03 |
| 48 | GO:0008378: galactosyltransferase activity | 4.32E-03 |
| 49 | GO:0004022: alcohol dehydrogenase (NAD) activity | 4.71E-03 |
| 50 | GO:0005388: calcium-transporting ATPase activity | 4.71E-03 |
| 51 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 5.21E-03 |
| 52 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 5.21E-03 |
| 53 | GO:0017025: TBP-class protein binding | 5.54E-03 |
| 54 | GO:0005509: calcium ion binding | 6.20E-03 |
| 55 | GO:0016758: transferase activity, transferring hexosyl groups | 6.95E-03 |
| 56 | GO:0008080: N-acetyltransferase activity | 1.04E-02 |
| 57 | GO:0016853: isomerase activity | 1.09E-02 |
| 58 | GO:0008194: UDP-glycosyltransferase activity | 1.10E-02 |
| 59 | GO:0008168: methyltransferase activity | 1.47E-02 |
| 60 | GO:0051213: dioxygenase activity | 1.56E-02 |
| 61 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.69E-02 |
| 62 | GO:0004683: calmodulin-dependent protein kinase activity | 1.75E-02 |
| 63 | GO:0030247: polysaccharide binding | 1.75E-02 |
| 64 | GO:0005507: copper ion binding | 1.77E-02 |
| 65 | GO:0004497: monooxygenase activity | 1.90E-02 |
| 66 | GO:0005096: GTPase activator activity | 1.95E-02 |
| 67 | GO:0015238: drug transmembrane transporter activity | 1.95E-02 |
| 68 | GO:0050897: cobalt ion binding | 2.09E-02 |
| 69 | GO:0003697: single-stranded DNA binding | 2.23E-02 |
| 70 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 2.23E-02 |
| 71 | GO:0000987: core promoter proximal region sequence-specific DNA binding | 2.30E-02 |
| 72 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.44E-02 |
| 73 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 2.46E-02 |
| 74 | GO:0005506: iron ion binding | 2.69E-02 |
| 75 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.82E-02 |
| 76 | GO:0043621: protein self-association | 2.82E-02 |
| 77 | GO:0009055: electron carrier activity | 3.01E-02 |
| 78 | GO:0031625: ubiquitin protein ligase binding | 3.55E-02 |
| 79 | GO:0016491: oxidoreductase activity | 3.86E-02 |
| 80 | GO:0051082: unfolded protein binding | 4.24E-02 |
| 81 | GO:0015035: protein disulfide oxidoreductase activity | 4.33E-02 |
| 82 | GO:0016887: ATPase activity | 4.33E-02 |
| 83 | GO:0003729: mRNA binding | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 2 | GO:0005788: endoplasmic reticulum lumen | 1.11E-07 |
| 3 | GO:0005783: endoplasmic reticulum | 1.94E-06 |
| 4 | GO:0005829: cytosol | 3.49E-06 |
| 5 | GO:0005886: plasma membrane | 5.87E-06 |
| 6 | GO:0000502: proteasome complex | 3.86E-05 |
| 7 | GO:0019773: proteasome core complex, alpha-subunit complex | 9.69E-05 |
| 8 | GO:0030134: ER to Golgi transport vesicle | 2.82E-04 |
| 9 | GO:0005839: proteasome core complex | 5.06E-04 |
| 10 | GO:0005968: Rab-protein geranylgeranyltransferase complex | 6.66E-04 |
| 11 | GO:0016592: mediator complex | 1.06E-03 |
| 12 | GO:0005746: mitochondrial respiratory chain | 1.12E-03 |
| 13 | GO:0031597: cytosolic proteasome complex | 1.64E-03 |
| 14 | GO:0005801: cis-Golgi network | 1.64E-03 |
| 15 | GO:0031595: nuclear proteasome complex | 1.92E-03 |
| 16 | GO:0000326: protein storage vacuole | 2.54E-03 |
| 17 | GO:0016021: integral component of membrane | 2.77E-03 |
| 18 | GO:0016020: membrane | 2.88E-03 |
| 19 | GO:0008540: proteasome regulatory particle, base subcomplex | 3.21E-03 |
| 20 | GO:0005740: mitochondrial envelope | 3.57E-03 |
| 21 | GO:0008541: proteasome regulatory particle, lid subcomplex | 3.94E-03 |
| 22 | GO:0043231: intracellular membrane-bounded organelle | 6.16E-03 |
| 23 | GO:0005741: mitochondrial outer membrane | 7.34E-03 |
| 24 | GO:0005759: mitochondrial matrix | 8.97E-03 |
| 25 | GO:0019005: SCF ubiquitin ligase complex | 1.88E-02 |
| 26 | GO:0005794: Golgi apparatus | 1.98E-02 |
| 27 | GO:0005737: cytoplasm | 2.09E-02 |
| 28 | GO:0000325: plant-type vacuole | 2.09E-02 |
| 29 | GO:0005819: spindle | 2.37E-02 |
| 30 | GO:0005773: vacuole | 3.05E-02 |
| 31 | GO:0005635: nuclear envelope | 3.46E-02 |
| 32 | GO:0009505: plant-type cell wall | 3.63E-02 |
| 33 | GO:0005747: mitochondrial respiratory chain complex I | 3.80E-02 |
| 34 | GO:0005774: vacuolar membrane | 4.44E-02 |