co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G38650

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010360: negative regulation of anion channel activity	0.00E+00
2	GO:0006182: cGMP biosynthetic process	0.00E+00
3	GO:0030970: retrograde protein transport, ER to cytosol	0.00E+00
4	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
5	GO:0009617: response to bacterium	1.55E-05
6	GO:0010120: camalexin biosynthetic process	7.69E-05
7	GO:0051865: protein autoubiquitination	9.49E-05
8	GO:0009270: response to humidity	1.04E-04
9	GO:0034975: protein folding in endoplasmic reticulum	1.04E-04
10	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.04E-04
11	GO:1902361: mitochondrial pyruvate transmembrane transport	1.04E-04
12	GO:0046244: salicylic acid catabolic process	1.04E-04
13	GO:0012501: programmed cell death	1.86E-04
14	GO:0006850: mitochondrial pyruvate transport	2.44E-04
15	GO:0015865: purine nucleotide transport	2.44E-04
16	GO:1902000: homogentisate catabolic process	2.44E-04
17	GO:0019725: cellular homeostasis	2.44E-04
18	GO:0044419: interspecies interaction between organisms	2.44E-04
19	GO:0010167: response to nitrate	2.74E-04
20	GO:0045793: positive regulation of cell size	4.05E-04
21	GO:0010186: positive regulation of cellular defense response	4.05E-04
22	GO:0009072: aromatic amino acid family metabolic process	4.05E-04
23	GO:0055074: calcium ion homeostasis	4.05E-04
24	GO:0009626: plant-type hypersensitive response	4.90E-04
25	GO:0002239: response to oomycetes	5.82E-04
26	GO:0046902: regulation of mitochondrial membrane permeability	5.82E-04
27	GO:0002679: respiratory burst involved in defense response	5.82E-04
28	GO:0006952: defense response	7.69E-04
29	GO:0060548: negative regulation of cell death	7.73E-04
30	GO:0046283: anthocyanin-containing compound metabolic process	9.77E-04
31	GO:0010225: response to UV-C	9.77E-04
32	GO:0034052: positive regulation of plant-type hypersensitive response	9.77E-04
33	GO:0010150: leaf senescence	1.13E-03
34	GO:0042742: defense response to bacterium	1.18E-03
35	GO:0002238: response to molecule of fungal origin	1.19E-03
36	GO:0006561: proline biosynthetic process	1.19E-03
37	GO:0010256: endomembrane system organization	1.19E-03
38	GO:0043248: proteasome assembly	1.19E-03
39	GO:0006888: ER to Golgi vesicle-mediated transport	1.36E-03
40	GO:0048280: vesicle fusion with Golgi apparatus	1.43E-03
41	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.43E-03
42	GO:0009094: L-phenylalanine biosynthetic process	1.43E-03
43	GO:0009817: defense response to fungus, incompatible interaction	1.51E-03
44	GO:1900056: negative regulation of leaf senescence	1.67E-03
45	GO:0006468: protein phosphorylation	1.69E-03
46	GO:0015031: protein transport	1.79E-03
47	GO:0043068: positive regulation of programmed cell death	1.93E-03
48	GO:2000070: regulation of response to water deprivation	1.93E-03
49	GO:0010204: defense response signaling pathway, resistance gene-independent	2.21E-03
50	GO:0009808: lignin metabolic process	2.21E-03
51	GO:0042542: response to hydrogen peroxide	2.34E-03
52	GO:0010112: regulation of systemic acquired resistance	2.49E-03
53	GO:0006457: protein folding	2.58E-03
54	GO:0030042: actin filament depolymerization	2.79E-03
55	GO:0006896: Golgi to vacuole transport	3.10E-03
56	GO:0009682: induced systemic resistance	3.42E-03
57	GO:0015706: nitrate transport	3.75E-03
58	GO:0002213: defense response to insect	3.75E-03
59	GO:0032259: methylation	3.95E-03
60	GO:0009718: anthocyanin-containing compound biosynthetic process	4.09E-03
61	GO:0009751: response to salicylic acid	4.10E-03
62	GO:0009408: response to heat	4.18E-03
63	GO:0009620: response to fungus	4.24E-03
64	GO:0009266: response to temperature stimulus	4.44E-03
65	GO:0002237: response to molecule of bacterial origin	4.44E-03
66	GO:0010053: root epidermal cell differentiation	4.80E-03
67	GO:0042343: indole glucosinolate metabolic process	4.80E-03
68	GO:0034976: response to endoplasmic reticulum stress	5.18E-03
69	GO:0006406: mRNA export from nucleus	5.56E-03
70	GO:0005992: trehalose biosynthetic process	5.56E-03
71	GO:0030150: protein import into mitochondrial matrix	5.56E-03
72	GO:0006874: cellular calcium ion homeostasis	5.95E-03
73	GO:0098542: defense response to other organism	6.35E-03
74	GO:0030433: ubiquitin-dependent ERAD pathway	6.76E-03
75	GO:0019748: secondary metabolic process	6.76E-03
76	GO:0010584: pollen exine formation	7.61E-03
77	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	8.05E-03
78	GO:0042147: retrograde transport, endosome to Golgi	8.05E-03
79	GO:0010118: stomatal movement	8.49E-03
80	GO:0048868: pollen tube development	8.95E-03
81	GO:0006623: protein targeting to vacuole	9.90E-03
82	GO:0000302: response to reactive oxygen species	1.04E-02
83	GO:0006891: intra-Golgi vesicle-mediated transport	1.04E-02
84	GO:0002229: defense response to oomycetes	1.04E-02
85	GO:0009630: gravitropism	1.09E-02
86	GO:0007264: small GTPase mediated signal transduction	1.09E-02
87	GO:0030163: protein catabolic process	1.14E-02
88	GO:0006464: cellular protein modification process	1.19E-02
89	GO:0009567: double fertilization forming a zygote and endosperm	1.19E-02
90	GO:0009860: pollen tube growth	1.34E-02
91	GO:0009615: response to virus	1.35E-02
92	GO:0042128: nitrate assimilation	1.45E-02
93	GO:0010200: response to chitin	1.59E-02
94	GO:0008219: cell death	1.62E-02
95	GO:0009407: toxin catabolic process	1.74E-02
96	GO:0006499: N-terminal protein myristoylation	1.74E-02
97	GO:0007568: aging	1.80E-02
98	GO:0055114: oxidation-reduction process	1.81E-02
99	GO:0045454: cell redox homeostasis	1.85E-02
100	GO:0000724: double-strand break repair via homologous recombination	1.86E-02
101	GO:0006886: intracellular protein transport	1.90E-02
102	GO:0006839: mitochondrial transport	2.11E-02
103	GO:0006979: response to oxidative stress	2.13E-02
104	GO:0008152: metabolic process	2.51E-02
105	GO:0006855: drug transmembrane transport	2.57E-02
106	GO:0031347: regulation of defense response	2.64E-02
107	GO:0009846: pollen germination	2.70E-02
108	GO:0042538: hyperosmotic salinity response	2.70E-02
109	GO:0006486: protein glycosylation	2.84E-02
110	GO:0009909: regulation of flower development	3.06E-02
111	GO:0009553: embryo sac development	3.58E-02
112	GO:0009624: response to nematode	3.66E-02
113	GO:0046686: response to cadmium ion	3.67E-02
114	GO:0009611: response to wounding	4.12E-02

Rank	GO Term	Adjusted P value
1	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
2	GO:0051670: inulinase activity	0.00E+00
3	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
4	GO:0031219: levanase activity	1.04E-04
5	GO:0051669: fructan beta-fructosidase activity	1.04E-04
6	GO:0008517: folic acid transporter activity	2.44E-04
7	GO:0004383: guanylate cyclase activity	4.05E-04
8	GO:0000030: mannosyltransferase activity	4.05E-04
9	GO:0005093: Rab GDP-dissociation inhibitor activity	4.05E-04
10	GO:0050833: pyruvate transmembrane transporter activity	4.05E-04
11	GO:0003756: protein disulfide isomerase activity	5.34E-04
12	GO:0015035: protein disulfide oxidoreductase activity	5.93E-04
13	GO:0047769: arogenate dehydratase activity	7.73E-04
14	GO:0004664: prephenate dehydratase activity	7.73E-04
15	GO:0005471: ATP:ADP antiporter activity	9.77E-04
16	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.43E-03
17	GO:0008320: protein transmembrane transporter activity	1.67E-03
18	GO:0008168: methyltransferase activity	1.85E-03
19	GO:0004674: protein serine/threonine kinase activity	1.90E-03
20	GO:0005544: calcium-dependent phospholipid binding	1.93E-03
21	GO:0045309: protein phosphorylated amino acid binding	2.79E-03
22	GO:0015112: nitrate transmembrane transporter activity	2.79E-03
23	GO:0004713: protein tyrosine kinase activity	3.10E-03
24	GO:0005543: phospholipid binding	3.42E-03
25	GO:0019904: protein domain specific binding	3.42E-03
26	GO:0008559: xenobiotic-transporting ATPase activity	3.42E-03
27	GO:0008794: arsenate reductase (glutaredoxin) activity	3.42E-03
28	GO:0016301: kinase activity	4.05E-03
29	GO:0004022: alcohol dehydrogenase (NAD) activity	4.09E-03
30	GO:0015266: protein channel activity	4.09E-03
31	GO:0009055: electron carrier activity	4.56E-03
32	GO:0004970: ionotropic glutamate receptor activity	4.80E-03
33	GO:0005217: intracellular ligand-gated ion channel activity	4.80E-03
34	GO:0043424: protein histidine kinase binding	5.95E-03
35	GO:0008194: UDP-glycosyltransferase activity	8.95E-03
36	GO:0016853: isomerase activity	9.42E-03
37	GO:0004872: receptor activity	9.90E-03
38	GO:0004197: cysteine-type endopeptidase activity	1.09E-02
39	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.14E-02
40	GO:0008237: metallopeptidase activity	1.24E-02
41	GO:0005524: ATP binding	1.29E-02
42	GO:0016597: amino acid binding	1.29E-02
43	GO:0051213: dioxygenase activity	1.35E-02
44	GO:0004683: calmodulin-dependent protein kinase activity	1.51E-02
45	GO:0030247: polysaccharide binding	1.51E-02
46	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	1.62E-02
47	GO:0005096: GTPase activator activity	1.68E-02
48	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.80E-02
49	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.92E-02
50	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.99E-02
51	GO:0000149: SNARE binding	2.04E-02
52	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.04E-02
53	GO:0004364: glutathione transferase activity	2.24E-02
54	GO:0005484: SNAP receptor activity	2.30E-02
55	GO:0016757: transferase activity, transferring glycosyl groups	3.19E-02
56	GO:0004672: protein kinase activity	3.41E-02
57	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.43E-02
58	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.43E-02
59	GO:0003779: actin binding	3.58E-02
60	GO:0051082: unfolded protein binding	3.66E-02
61	GO:0016758: transferase activity, transferring hexosyl groups	4.21E-02
62	GO:0004252: serine-type endopeptidase activity	4.62E-02
63	GO:0016740: transferase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0031305: integral component of mitochondrial inner membrane	6.06E-05
2	GO:0005788: endoplasmic reticulum lumen	9.04E-05
3	GO:0008541: proteasome regulatory particle, lid subcomplex	1.61E-04
4	GO:0030134: ER to Golgi transport vesicle	2.44E-04
5	GO:0005783: endoplasmic reticulum	4.18E-04
6	GO:0005886: plasma membrane	6.44E-04
7	GO:0030140: trans-Golgi network transport vesicle	1.19E-03
8	GO:0005801: cis-Golgi network	1.43E-03
9	GO:0000325: plant-type vacuole	1.73E-03
10	GO:0012507: ER to Golgi transport vesicle membrane	1.93E-03
11	GO:0005789: endoplasmic reticulum membrane	2.47E-03
12	GO:0000502: proteasome complex	3.27E-03
13	GO:0015629: actin cytoskeleton	7.18E-03
14	GO:0005744: mitochondrial inner membrane presequence translocase complex	7.61E-03
15	GO:0005770: late endosome	8.95E-03
16	GO:0016592: mediator complex	1.09E-02
17	GO:0031902: late endosome membrane	2.17E-02
18	GO:0031201: SNARE complex	2.17E-02
19	GO:0031966: mitochondrial membrane	2.70E-02
20	GO:0016021: integral component of membrane	2.74E-02
21	GO:0005635: nuclear envelope	2.99E-02
22	GO:0005774: vacuolar membrane	3.28E-02
23	GO:0009506: plasmodesma	4.00E-02