GO Enrichment Analysis of Co-expressed Genes with
AT5G27390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080056: petal vascular tissue pattern formation | 0.00E+00 |
| 2 | GO:0045047: protein targeting to ER | 0.00E+00 |
| 3 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 4 | GO:0031564: transcription antitermination | 0.00E+00 |
| 5 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 6 | GO:0080057: sepal vascular tissue pattern formation | 0.00E+00 |
| 7 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 8 | GO:0080180: 2-methylguanosine metabolic process | 0.00E+00 |
| 9 | GO:0000478: endonucleolytic cleavage involved in rRNA processing | 0.00E+00 |
| 10 | GO:0019307: mannose biosynthetic process | 0.00E+00 |
| 11 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 12 | GO:0006042: glucosamine biosynthetic process | 0.00E+00 |
| 13 | GO:1901137: carbohydrate derivative biosynthetic process | 0.00E+00 |
| 14 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 15 | GO:0031167: rRNA methylation | 5.18E-06 |
| 16 | GO:0001510: RNA methylation | 2.72E-05 |
| 17 | GO:0051775: response to redox state | 5.34E-05 |
| 18 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 5.34E-05 |
| 19 | GO:0042254: ribosome biogenesis | 6.29E-05 |
| 20 | GO:0006364: rRNA processing | 1.07E-04 |
| 21 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.30E-04 |
| 22 | GO:0015865: purine nucleotide transport | 1.30E-04 |
| 23 | GO:0045041: protein import into mitochondrial intermembrane space | 1.30E-04 |
| 24 | GO:0007005: mitochondrion organization | 1.84E-04 |
| 25 | GO:0006013: mannose metabolic process | 2.22E-04 |
| 26 | GO:0045039: protein import into mitochondrial inner membrane | 2.22E-04 |
| 27 | GO:0008033: tRNA processing | 2.60E-04 |
| 28 | GO:0046902: regulation of mitochondrial membrane permeability | 3.25E-04 |
| 29 | GO:0051131: chaperone-mediated protein complex assembly | 3.25E-04 |
| 30 | GO:0009298: GDP-mannose biosynthetic process | 3.25E-04 |
| 31 | GO:0000460: maturation of 5.8S rRNA | 4.35E-04 |
| 32 | GO:0046686: response to cadmium ion | 5.26E-04 |
| 33 | GO:0018279: protein N-linked glycosylation via asparagine | 5.52E-04 |
| 34 | GO:0045116: protein neddylation | 5.52E-04 |
| 35 | GO:0000470: maturation of LSU-rRNA | 6.76E-04 |
| 36 | GO:0042026: protein refolding | 8.05E-04 |
| 37 | GO:0006458: 'de novo' protein folding | 8.05E-04 |
| 38 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 9.40E-04 |
| 39 | GO:0006400: tRNA modification | 9.40E-04 |
| 40 | GO:0000028: ribosomal small subunit assembly | 1.08E-03 |
| 41 | GO:0006102: isocitrate metabolic process | 1.08E-03 |
| 42 | GO:0006189: 'de novo' IMP biosynthetic process | 1.38E-03 |
| 43 | GO:0098656: anion transmembrane transport | 1.38E-03 |
| 44 | GO:0009651: response to salt stress | 2.01E-03 |
| 45 | GO:0006820: anion transport | 2.06E-03 |
| 46 | GO:0010588: cotyledon vascular tissue pattern formation | 2.25E-03 |
| 47 | GO:0006626: protein targeting to mitochondrion | 2.25E-03 |
| 48 | GO:0006094: gluconeogenesis | 2.25E-03 |
| 49 | GO:0046688: response to copper ion | 2.63E-03 |
| 50 | GO:0019853: L-ascorbic acid biosynthetic process | 2.63E-03 |
| 51 | GO:0006487: protein N-linked glycosylation | 3.03E-03 |
| 52 | GO:0006825: copper ion transport | 3.24E-03 |
| 53 | GO:0061077: chaperone-mediated protein folding | 3.46E-03 |
| 54 | GO:0007131: reciprocal meiotic recombination | 3.68E-03 |
| 55 | GO:0009617: response to bacterium | 3.93E-03 |
| 56 | GO:0006412: translation | 4.34E-03 |
| 57 | GO:0010154: fruit development | 4.84E-03 |
| 58 | GO:0010305: leaf vascular tissue pattern formation | 4.84E-03 |
| 59 | GO:0015986: ATP synthesis coupled proton transport | 5.09E-03 |
| 60 | GO:0006635: fatty acid beta-oxidation | 5.60E-03 |
| 61 | GO:0010252: auxin homeostasis | 6.39E-03 |
| 62 | GO:0016049: cell growth | 8.38E-03 |
| 63 | GO:0032259: methylation | 8.91E-03 |
| 64 | GO:0009408: response to heat | 9.31E-03 |
| 65 | GO:0009631: cold acclimation | 9.61E-03 |
| 66 | GO:0048527: lateral root development | 9.61E-03 |
| 67 | GO:0006099: tricarboxylic acid cycle | 1.06E-02 |
| 68 | GO:0042542: response to hydrogen peroxide | 1.19E-02 |
| 69 | GO:0009744: response to sucrose | 1.23E-02 |
| 70 | GO:0009965: leaf morphogenesis | 1.33E-02 |
| 71 | GO:0009664: plant-type cell wall organization | 1.44E-02 |
| 72 | GO:0009735: response to cytokinin | 1.51E-02 |
| 73 | GO:0006096: glycolytic process | 1.70E-02 |
| 74 | GO:0048316: seed development | 1.74E-02 |
| 75 | GO:0048367: shoot system development | 1.74E-02 |
| 76 | GO:0009845: seed germination | 2.41E-02 |
| 77 | GO:0009451: RNA modification | 2.91E-02 |
| 78 | GO:0009414: response to water deprivation | 3.28E-02 |
| 79 | GO:0009826: unidimensional cell growth | 3.81E-02 |
| 80 | GO:0006970: response to osmotic stress | 4.12E-02 |
| 81 | GO:0009723: response to ethylene | 4.34E-02 |
| 82 | GO:0048366: leaf development | 4.39E-02 |
| 83 | GO:0006810: transport | 4.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 2 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 3 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 4 | GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity | 0.00E+00 |
| 5 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 6 | GO:0004615: phosphomannomutase activity | 0.00E+00 |
| 7 | GO:0008649: rRNA methyltransferase activity | 6.57E-07 |
| 8 | GO:0005507: copper ion binding | 1.08E-05 |
| 9 | GO:0030515: snoRNA binding | 1.59E-05 |
| 10 | GO:0003746: translation elongation factor activity | 4.66E-05 |
| 11 | GO:0097367: carbohydrate derivative binding | 5.34E-05 |
| 12 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 5.34E-05 |
| 13 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 5.34E-05 |
| 14 | GO:0019781: NEDD8 activating enzyme activity | 1.30E-04 |
| 15 | GO:0043021: ribonucleoprotein complex binding | 1.30E-04 |
| 16 | GO:0016531: copper chaperone activity | 2.22E-04 |
| 17 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.25E-04 |
| 18 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 3.25E-04 |
| 19 | GO:0008641: small protein activating enzyme activity | 5.52E-04 |
| 20 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 5.52E-04 |
| 21 | GO:0005471: ATP:ADP antiporter activity | 5.52E-04 |
| 22 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 6.76E-04 |
| 23 | GO:0003723: RNA binding | 7.04E-04 |
| 24 | GO:0003735: structural constituent of ribosome | 8.09E-04 |
| 25 | GO:0008121: ubiquinol-cytochrome-c reductase activity | 9.40E-04 |
| 26 | GO:0015288: porin activity | 1.08E-03 |
| 27 | GO:0008308: voltage-gated anion channel activity | 1.23E-03 |
| 28 | GO:0008135: translation factor activity, RNA binding | 1.23E-03 |
| 29 | GO:0051287: NAD binding | 1.24E-03 |
| 30 | GO:0044183: protein binding involved in protein folding | 1.88E-03 |
| 31 | GO:0051082: unfolded protein binding | 1.93E-03 |
| 32 | GO:0008266: poly(U) RNA binding | 2.43E-03 |
| 33 | GO:0000166: nucleotide binding | 2.78E-03 |
| 34 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 4.84E-03 |
| 35 | GO:0008168: methyltransferase activity | 4.90E-03 |
| 36 | GO:0008483: transaminase activity | 6.66E-03 |
| 37 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.68E-03 |
| 38 | GO:0003924: GTPase activity | 9.31E-03 |
| 39 | GO:0050897: cobalt ion binding | 9.61E-03 |
| 40 | GO:0003697: single-stranded DNA binding | 1.02E-02 |
| 41 | GO:0050661: NADP binding | 1.12E-02 |
| 42 | GO:0003729: mRNA binding | 1.13E-02 |
| 43 | GO:0003690: double-stranded DNA binding | 1.55E-02 |
| 44 | GO:0016746: transferase activity, transferring acyl groups | 1.98E-02 |
| 45 | GO:0015035: protein disulfide oxidoreductase activity | 1.98E-02 |
| 46 | GO:0008565: protein transporter activity | 2.59E-02 |
| 47 | GO:0005525: GTP binding | 2.73E-02 |
| 48 | GO:0000287: magnesium ion binding | 3.86E-02 |
| 49 | GO:0003676: nucleic acid binding | 4.03E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 2 | GO:0005739: mitochondrion | 1.17E-12 |
| 3 | GO:0005730: nucleolus | 1.01E-11 |
| 4 | GO:0005774: vacuolar membrane | 1.23E-07 |
| 5 | GO:0005747: mitochondrial respiratory chain complex I | 6.19E-06 |
| 6 | GO:0031428: box C/D snoRNP complex | 8.00E-06 |
| 7 | GO:0015030: Cajal body | 4.18E-05 |
| 8 | GO:0005740: mitochondrial envelope | 5.04E-05 |
| 9 | GO:0005773: vacuole | 5.60E-05 |
| 10 | GO:0032040: small-subunit processome | 7.04E-05 |
| 11 | GO:0070545: PeBoW complex | 1.30E-04 |
| 12 | GO:0005758: mitochondrial intermembrane space | 1.35E-04 |
| 13 | GO:0005759: mitochondrial matrix | 3.27E-04 |
| 14 | GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1) | 4.35E-04 |
| 15 | GO:0008250: oligosaccharyltransferase complex | 5.52E-04 |
| 16 | GO:0030687: preribosome, large subunit precursor | 9.40E-04 |
| 17 | GO:0046930: pore complex | 1.23E-03 |
| 18 | GO:0005763: mitochondrial small ribosomal subunit | 1.38E-03 |
| 19 | GO:0005840: ribosome | 1.40E-03 |
| 20 | GO:0005834: heterotrimeric G-protein complex | 1.71E-03 |
| 21 | GO:0005750: mitochondrial respiratory chain complex III | 2.43E-03 |
| 22 | GO:0005753: mitochondrial proton-transporting ATP synthase complex | 2.63E-03 |
| 23 | GO:0022626: cytosolic ribosome | 2.63E-03 |
| 24 | GO:0005741: mitochondrial outer membrane | 3.46E-03 |
| 25 | GO:0016592: mediator complex | 5.86E-03 |
| 26 | GO:0022625: cytosolic large ribosomal subunit | 6.63E-03 |
| 27 | GO:0005743: mitochondrial inner membrane | 8.66E-03 |
| 28 | GO:0005618: cell wall | 1.05E-02 |
| 29 | GO:0009941: chloroplast envelope | 1.36E-02 |
| 30 | GO:0000502: proteasome complex | 1.51E-02 |
| 31 | GO:0016020: membrane | 1.79E-02 |
| 32 | GO:0005654: nucleoplasm | 2.24E-02 |
| 33 | GO:0022627: cytosolic small ribosomal subunit | 3.50E-02 |
| 34 | GO:0009536: plastid | 4.11E-02 |
| 35 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 4.18E-02 |
| 36 | GO:0009505: plant-type cell wall | 4.20E-02 |