GO Enrichment Analysis of Co-expressed Genes with
AT5G27350
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0071242: cellular response to ammonium ion | 0.00E+00 |
| 3 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 4 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 5 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 6 | GO:0006114: glycerol biosynthetic process | 0.00E+00 |
| 7 | GO:0071554: cell wall organization or biogenesis | 4.35E-05 |
| 8 | GO:0010411: xyloglucan metabolic process | 9.88E-05 |
| 9 | GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway | 1.00E-04 |
| 10 | GO:0043266: regulation of potassium ion transport | 1.00E-04 |
| 11 | GO:0031338: regulation of vesicle fusion | 1.00E-04 |
| 12 | GO:2000021: regulation of ion homeostasis | 1.00E-04 |
| 13 | GO:0010289: homogalacturonan biosynthetic process | 2.36E-04 |
| 14 | GO:0010270: photosystem II oxygen evolving complex assembly | 2.36E-04 |
| 15 | GO:0045717: negative regulation of fatty acid biosynthetic process | 2.36E-04 |
| 16 | GO:0042546: cell wall biogenesis | 2.42E-04 |
| 17 | GO:0090630: activation of GTPase activity | 3.92E-04 |
| 18 | GO:0016998: cell wall macromolecule catabolic process | 3.94E-04 |
| 19 | GO:0010371: regulation of gibberellin biosynthetic process | 5.64E-04 |
| 20 | GO:0009152: purine ribonucleotide biosynthetic process | 5.64E-04 |
| 21 | GO:0046653: tetrahydrofolate metabolic process | 5.64E-04 |
| 22 | GO:0044211: CTP salvage | 5.64E-04 |
| 23 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 5.64E-04 |
| 24 | GO:0044206: UMP salvage | 7.50E-04 |
| 25 | GO:0016120: carotene biosynthetic process | 9.47E-04 |
| 26 | GO:0043097: pyrimidine nucleoside salvage | 9.47E-04 |
| 27 | GO:0045487: gibberellin catabolic process | 9.47E-04 |
| 28 | GO:0000304: response to singlet oxygen | 9.47E-04 |
| 29 | GO:0016554: cytidine to uridine editing | 1.16E-03 |
| 30 | GO:0006828: manganese ion transport | 1.16E-03 |
| 31 | GO:0006206: pyrimidine nucleobase metabolic process | 1.16E-03 |
| 32 | GO:0010190: cytochrome b6f complex assembly | 1.16E-03 |
| 33 | GO:0042128: nitrate assimilation | 1.24E-03 |
| 34 | GO:0015995: chlorophyll biosynthetic process | 1.30E-03 |
| 35 | GO:2000033: regulation of seed dormancy process | 1.38E-03 |
| 36 | GO:0048564: photosystem I assembly | 1.87E-03 |
| 37 | GO:0071482: cellular response to light stimulus | 2.14E-03 |
| 38 | GO:0009657: plastid organization | 2.14E-03 |
| 39 | GO:0006526: arginine biosynthetic process | 2.14E-03 |
| 40 | GO:0032544: plastid translation | 2.14E-03 |
| 41 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.70E-03 |
| 42 | GO:1900865: chloroplast RNA modification | 2.70E-03 |
| 43 | GO:0010162: seed dormancy process | 3.00E-03 |
| 44 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.00E-03 |
| 45 | GO:0046856: phosphatidylinositol dephosphorylation | 3.31E-03 |
| 46 | GO:0006816: calcium ion transport | 3.31E-03 |
| 47 | GO:0006415: translational termination | 3.31E-03 |
| 48 | GO:0006857: oligopeptide transport | 3.33E-03 |
| 49 | GO:0006820: anion transport | 3.63E-03 |
| 50 | GO:0010207: photosystem II assembly | 4.30E-03 |
| 51 | GO:0071732: cellular response to nitric oxide | 4.64E-03 |
| 52 | GO:0071555: cell wall organization | 4.73E-03 |
| 53 | GO:0016575: histone deacetylation | 5.75E-03 |
| 54 | GO:0009058: biosynthetic process | 5.82E-03 |
| 55 | GO:0031408: oxylipin biosynthetic process | 6.14E-03 |
| 56 | GO:0071369: cellular response to ethylene stimulus | 6.94E-03 |
| 57 | GO:0016117: carotenoid biosynthetic process | 7.78E-03 |
| 58 | GO:0010182: sugar mediated signaling pathway | 8.65E-03 |
| 59 | GO:0006520: cellular amino acid metabolic process | 8.65E-03 |
| 60 | GO:1901657: glycosyl compound metabolic process | 1.10E-02 |
| 61 | GO:0071281: cellular response to iron ion | 1.10E-02 |
| 62 | GO:0010027: thylakoid membrane organization | 1.30E-02 |
| 63 | GO:0009627: systemic acquired resistance | 1.40E-02 |
| 64 | GO:0016311: dephosphorylation | 1.51E-02 |
| 65 | GO:0009817: defense response to fungus, incompatible interaction | 1.57E-02 |
| 66 | GO:0009407: toxin catabolic process | 1.68E-02 |
| 67 | GO:0009853: photorespiration | 1.86E-02 |
| 68 | GO:0016051: carbohydrate biosynthetic process | 1.86E-02 |
| 69 | GO:0009753: response to jasmonic acid | 2.33E-02 |
| 70 | GO:0009636: response to toxic substance | 2.41E-02 |
| 71 | GO:0042538: hyperosmotic salinity response | 2.61E-02 |
| 72 | GO:0006486: protein glycosylation | 2.75E-02 |
| 73 | GO:0046686: response to cadmium ion | 3.45E-02 |
| 74 | GO:0006396: RNA processing | 3.61E-02 |
| 75 | GO:0009416: response to light stimulus | 3.84E-02 |
| 76 | GO:0009790: embryo development | 4.62E-02 |
| 77 | GO:0006633: fatty acid biosynthetic process | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 2 | GO:0052751: GDP-mannose hydrolase activity | 0.00E+00 |
| 3 | GO:0043136: glycerol-3-phosphatase activity | 0.00E+00 |
| 4 | GO:0000121: glycerol-1-phosphatase activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 7 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 8 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 9 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 4.35E-05 |
| 10 | GO:0016413: O-acetyltransferase activity | 7.07E-05 |
| 11 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 9.88E-05 |
| 12 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.00E-04 |
| 13 | GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity | 1.00E-04 |
| 14 | GO:0008252: nucleotidase activity | 1.00E-04 |
| 15 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 1.00E-04 |
| 16 | GO:0015095: magnesium ion transmembrane transporter activity | 2.03E-04 |
| 17 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 2.36E-04 |
| 18 | GO:0008864: formyltetrahydrofolate deformylase activity | 3.92E-04 |
| 19 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 3.92E-04 |
| 20 | GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity | 3.92E-04 |
| 21 | GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity | 3.92E-04 |
| 22 | GO:0004751: ribose-5-phosphate isomerase activity | 3.92E-04 |
| 23 | GO:0030267: glyoxylate reductase (NADP) activity | 3.92E-04 |
| 24 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 3.92E-04 |
| 25 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 5.64E-04 |
| 26 | GO:0048487: beta-tubulin binding | 5.64E-04 |
| 27 | GO:0016149: translation release factor activity, codon specific | 5.64E-04 |
| 28 | GO:0043023: ribosomal large subunit binding | 5.64E-04 |
| 29 | GO:0004845: uracil phosphoribosyltransferase activity | 7.50E-04 |
| 30 | GO:0016836: hydro-lyase activity | 7.50E-04 |
| 31 | GO:0052793: pectin acetylesterase activity | 7.50E-04 |
| 32 | GO:0008381: mechanically-gated ion channel activity | 9.47E-04 |
| 33 | GO:0017137: Rab GTPase binding | 9.47E-04 |
| 34 | GO:0008200: ion channel inhibitor activity | 1.16E-03 |
| 35 | GO:0080030: methyl indole-3-acetate esterase activity | 1.16E-03 |
| 36 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.16E-03 |
| 37 | GO:0004849: uridine kinase activity | 1.38E-03 |
| 38 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 1.38E-03 |
| 39 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.38E-03 |
| 40 | GO:0043295: glutathione binding | 1.62E-03 |
| 41 | GO:0004033: aldo-keto reductase (NADP) activity | 1.87E-03 |
| 42 | GO:0016788: hydrolase activity, acting on ester bonds | 1.87E-03 |
| 43 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 2.14E-03 |
| 44 | GO:0003747: translation release factor activity | 2.41E-03 |
| 45 | GO:0015293: symporter activity | 2.61E-03 |
| 46 | GO:0005384: manganese ion transmembrane transporter activity | 2.70E-03 |
| 47 | GO:0047617: acyl-CoA hydrolase activity | 2.70E-03 |
| 48 | GO:0008378: galactosyltransferase activity | 3.63E-03 |
| 49 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 3.63E-03 |
| 50 | GO:0016787: hydrolase activity | 4.10E-03 |
| 51 | GO:0004407: histone deacetylase activity | 5.37E-03 |
| 52 | GO:0005528: FK506 binding | 5.37E-03 |
| 53 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 5.67E-03 |
| 54 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 6.54E-03 |
| 55 | GO:0016491: oxidoreductase activity | 7.18E-03 |
| 56 | GO:0019901: protein kinase binding | 9.56E-03 |
| 57 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.16E-02 |
| 58 | GO:0102483: scopolin beta-glucosidase activity | 1.46E-02 |
| 59 | GO:0004721: phosphoprotein phosphatase activity | 1.46E-02 |
| 60 | GO:0004497: monooxygenase activity | 1.47E-02 |
| 61 | GO:0052689: carboxylic ester hydrolase activity | 1.62E-02 |
| 62 | GO:0005096: GTPase activator activity | 1.62E-02 |
| 63 | GO:0005509: calcium ion binding | 1.79E-02 |
| 64 | GO:0004871: signal transducer activity | 1.84E-02 |
| 65 | GO:0003993: acid phosphatase activity | 1.91E-02 |
| 66 | GO:0008422: beta-glucosidase activity | 1.97E-02 |
| 67 | GO:0004364: glutathione transferase activity | 2.16E-02 |
| 68 | GO:0043621: protein self-association | 2.35E-02 |
| 69 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.48E-02 |
| 70 | GO:0051287: NAD binding | 2.55E-02 |
| 71 | GO:0016758: transferase activity, transferring hexosyl groups | 4.06E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.26E-07 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 7.11E-05 |
| 3 | GO:0009570: chloroplast stroma | 3.05E-04 |
| 4 | GO:0031969: chloroplast membrane | 3.77E-04 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 1.17E-03 |
| 6 | GO:0031977: thylakoid lumen | 2.14E-03 |
| 7 | GO:0030095: chloroplast photosystem II | 4.30E-03 |
| 8 | GO:0043234: protein complex | 5.00E-03 |
| 9 | GO:0009654: photosystem II oxygen evolving complex | 5.75E-03 |
| 10 | GO:0019898: extrinsic component of membrane | 9.56E-03 |
| 11 | GO:0009579: thylakoid | 1.02E-02 |
| 12 | GO:0000151: ubiquitin ligase complex | 1.57E-02 |
| 13 | GO:0009941: chloroplast envelope | 1.60E-02 |
| 14 | GO:0048046: apoplast | 3.28E-02 |
| 15 | GO:0012505: endomembrane system | 3.46E-02 |
| 16 | GO:0005618: cell wall | 3.71E-02 |
| 17 | GO:0010287: plastoglobule | 3.99E-02 |
| 18 | GO:0009534: chloroplast thylakoid | 4.62E-02 |