Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G23060

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
2GO:0015979: photosynthesis1.62E-08
3GO:0010027: thylakoid membrane organization4.17E-07
4GO:0015671: oxygen transport8.86E-06
5GO:1902458: positive regulation of stomatal opening8.86E-06
6GO:1903426: regulation of reactive oxygen species biosynthetic process2.38E-05
7GO:0090391: granum assembly4.33E-05
8GO:0071492: cellular response to UV-A4.33E-05
9GO:0015995: chlorophyll biosynthetic process5.62E-05
10GO:0071486: cellular response to high light intensity9.27E-05
11GO:0009644: response to high light intensity1.20E-04
12GO:0045038: protein import into chloroplast thylakoid membrane1.21E-04
13GO:0031365: N-terminal protein amino acid modification1.21E-04
14GO:0009735: response to cytokinin1.36E-04
15GO:0010190: cytochrome b6f complex assembly1.52E-04
16GO:0009635: response to herbicide1.52E-04
17GO:0071470: cellular response to osmotic stress1.85E-04
18GO:0010196: nonphotochemical quenching2.19E-04
19GO:0009769: photosynthesis, light harvesting in photosystem II2.19E-04
20GO:2000070: regulation of response to water deprivation2.54E-04
21GO:0015996: chlorophyll catabolic process2.91E-04
22GO:0007186: G-protein coupled receptor signaling pathway2.91E-04
23GO:0009245: lipid A biosynthetic process3.29E-04
24GO:0019432: triglyceride biosynthetic process3.29E-04
25GO:0045037: protein import into chloroplast stroma4.90E-04
26GO:0009725: response to hormone5.33E-04
27GO:0010207: photosystem II assembly5.76E-04
28GO:0009658: chloroplast organization5.84E-04
29GO:0090351: seedling development6.20E-04
30GO:0009768: photosynthesis, light harvesting in photosystem I7.58E-04
31GO:0042335: cuticle development1.05E-03
32GO:0010182: sugar mediated signaling pathway1.10E-03
33GO:0009627: systemic acquired resistance1.73E-03
34GO:0018298: protein-chromophore linkage1.92E-03
35GO:0010119: regulation of stomatal movement2.12E-03
36GO:0034599: cellular response to oxidative stress2.32E-03
37GO:0006631: fatty acid metabolic process2.52E-03
38GO:0009744: response to sucrose2.67E-03
39GO:0006633: fatty acid biosynthetic process5.65E-03
40GO:0045490: pectin catabolic process6.03E-03
41GO:0009737: response to abscisic acid7.61E-03
42GO:0080167: response to karrikin9.48E-03
43GO:0008152: metabolic process1.34E-02
44GO:0009416: response to light stimulus1.88E-02
45GO:0009611: response to wounding1.90E-02
46GO:0045893: positive regulation of transcription, DNA-templated2.07E-02
47GO:0055085: transmembrane transport2.22E-02
48GO:0006979: response to oxidative stress3.12E-02
RankGO TermAdjusted P value
1GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
2GO:0090711: FMN hydrolase activity0.00E+00
3GO:0005344: oxygen transporter activity8.86E-06
4GO:0016630: protochlorophyllide reductase activity2.38E-05
5GO:0016168: chlorophyll binding4.95E-05
6GO:0003959: NADPH dehydrogenase activity1.21E-04
7GO:0031177: phosphopantetheine binding1.52E-04
8GO:0000035: acyl binding1.85E-04
9GO:0008235: metalloexopeptidase activity2.19E-04
10GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process2.54E-04
11GO:0004177: aminopeptidase activity4.48E-04
12GO:0031409: pigment binding6.66E-04
13GO:0043424: protein histidine kinase binding7.58E-04
14GO:0030570: pectate lyase activity9.02E-04
15GO:0022891: substrate-specific transmembrane transporter activity9.02E-04
16GO:0004872: receptor activity1.21E-03
17GO:0046872: metal ion binding2.20E-03
18GO:0043621: protein self-association2.81E-03
19GO:0005198: structural molecule activity2.88E-03
20GO:0016829: lyase activity5.10E-03
21GO:0005515: protein binding1.55E-02
22GO:0019825: oxygen binding2.41E-02
23GO:0016491: oxidoreductase activity3.78E-02
24GO:0020037: heme binding4.30E-02
RankGO TermAdjusted P value
1GO:0009535: chloroplast thylakoid membrane5.83E-14
2GO:0009534: chloroplast thylakoid8.57E-13
3GO:0009515: granal stacked thylakoid8.86E-06
4GO:0016021: integral component of membrane1.20E-05
5GO:0009523: photosystem II2.75E-05
6GO:0009528: plastid inner membrane4.33E-05
7GO:0009941: chloroplast envelope4.47E-05
8GO:0009527: plastid outer membrane9.27E-05
9GO:0009507: chloroplast9.49E-05
10GO:0009579: thylakoid1.98E-04
11GO:0009538: photosystem I reaction center2.54E-04
12GO:0010287: plastoglobule2.63E-04
13GO:0030076: light-harvesting complex6.20E-04
14GO:0042651: thylakoid membrane7.58E-04
15GO:0009532: plastid stroma8.05E-04
16GO:0009522: photosystem I1.16E-03
17GO:0010319: stromule1.49E-03
18GO:0009707: chloroplast outer membrane1.92E-03
19GO:0009706: chloroplast inner membrane4.15E-03
20GO:0031969: chloroplast membrane9.48E-03
21GO:0009570: chloroplast stroma2.36E-02
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Gene type



Gene DE type





AT5G54270