GO Enrichment Analysis of Co-expressed Genes with
AT5G20150
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 2 | GO:0071242: cellular response to ammonium ion | 0.00E+00 |
| 3 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 4 | GO:2000121: regulation of removal of superoxide radicals | 0.00E+00 |
| 5 | GO:0042493: response to drug | 0.00E+00 |
| 6 | GO:0010207: photosystem II assembly | 7.69E-08 |
| 7 | GO:0015979: photosynthesis | 6.01E-06 |
| 8 | GO:1902458: positive regulation of stomatal opening | 1.10E-04 |
| 9 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.10E-04 |
| 10 | GO:1904964: positive regulation of phytol biosynthetic process | 1.10E-04 |
| 11 | GO:0042371: vitamin K biosynthetic process | 1.10E-04 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 1.18E-04 |
| 13 | GO:0009773: photosynthetic electron transport in photosystem I | 1.73E-04 |
| 14 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.57E-04 |
| 15 | GO:0043039: tRNA aminoacylation | 2.57E-04 |
| 16 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.57E-04 |
| 17 | GO:0042254: ribosome biogenesis | 3.35E-04 |
| 18 | GO:0009650: UV protection | 6.10E-04 |
| 19 | GO:0015976: carbon utilization | 8.10E-04 |
| 20 | GO:0009765: photosynthesis, light harvesting | 8.10E-04 |
| 21 | GO:2000122: negative regulation of stomatal complex development | 8.10E-04 |
| 22 | GO:0010037: response to carbon dioxide | 8.10E-04 |
| 23 | GO:0031365: N-terminal protein amino acid modification | 1.02E-03 |
| 24 | GO:0016123: xanthophyll biosynthetic process | 1.02E-03 |
| 25 | GO:0034052: positive regulation of plant-type hypersensitive response | 1.02E-03 |
| 26 | GO:0016120: carotene biosynthetic process | 1.02E-03 |
| 27 | GO:0010236: plastoquinone biosynthetic process | 1.02E-03 |
| 28 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.02E-03 |
| 29 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.25E-03 |
| 30 | GO:0010027: thylakoid membrane organization | 1.25E-03 |
| 31 | GO:0042128: nitrate assimilation | 1.39E-03 |
| 32 | GO:0071470: cellular response to osmotic stress | 1.49E-03 |
| 33 | GO:0042372: phylloquinone biosynthetic process | 1.49E-03 |
| 34 | GO:0009772: photosynthetic electron transport in photosystem II | 1.75E-03 |
| 35 | GO:0010444: guard mother cell differentiation | 1.75E-03 |
| 36 | GO:0006400: tRNA modification | 1.75E-03 |
| 37 | GO:0043068: positive regulation of programmed cell death | 2.03E-03 |
| 38 | GO:2000070: regulation of response to water deprivation | 2.03E-03 |
| 39 | GO:0017004: cytochrome complex assembly | 2.32E-03 |
| 40 | GO:0015996: chlorophyll catabolic process | 2.32E-03 |
| 41 | GO:0007186: G-protein coupled receptor signaling pathway | 2.32E-03 |
| 42 | GO:0032544: plastid translation | 2.32E-03 |
| 43 | GO:0010206: photosystem II repair | 2.62E-03 |
| 44 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 3.25E-03 |
| 45 | GO:0006415: translational termination | 3.59E-03 |
| 46 | GO:0019684: photosynthesis, light reaction | 3.59E-03 |
| 47 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.93E-03 |
| 48 | GO:0045037: protein import into chloroplast stroma | 3.93E-03 |
| 49 | GO:0009725: response to hormone | 4.30E-03 |
| 50 | GO:0009767: photosynthetic electron transport chain | 4.30E-03 |
| 51 | GO:0010628: positive regulation of gene expression | 4.30E-03 |
| 52 | GO:0010167: response to nitrate | 5.04E-03 |
| 53 | GO:0000027: ribosomal large subunit assembly | 5.84E-03 |
| 54 | GO:0006418: tRNA aminoacylation for protein translation | 6.25E-03 |
| 55 | GO:0061077: chaperone-mediated protein folding | 6.67E-03 |
| 56 | GO:0009814: defense response, incompatible interaction | 7.11E-03 |
| 57 | GO:0006012: galactose metabolic process | 7.55E-03 |
| 58 | GO:0009411: response to UV | 7.55E-03 |
| 59 | GO:0042127: regulation of cell proliferation | 8.00E-03 |
| 60 | GO:0016117: carotenoid biosynthetic process | 8.46E-03 |
| 61 | GO:0000413: protein peptidyl-prolyl isomerization | 8.93E-03 |
| 62 | GO:0010182: sugar mediated signaling pathway | 9.41E-03 |
| 63 | GO:0005975: carbohydrate metabolic process | 1.07E-02 |
| 64 | GO:0010583: response to cyclopentenone | 1.14E-02 |
| 65 | GO:1901657: glycosyl compound metabolic process | 1.20E-02 |
| 66 | GO:0010411: xyloglucan metabolic process | 1.59E-02 |
| 67 | GO:0018298: protein-chromophore linkage | 1.71E-02 |
| 68 | GO:0010119: regulation of stomatal movement | 1.89E-02 |
| 69 | GO:0034599: cellular response to oxidative stress | 2.09E-02 |
| 70 | GO:0006839: mitochondrial transport | 2.22E-02 |
| 71 | GO:0030001: metal ion transport | 2.22E-02 |
| 72 | GO:0006412: translation | 2.35E-02 |
| 73 | GO:0009744: response to sucrose | 2.42E-02 |
| 74 | GO:0042546: cell wall biogenesis | 2.49E-02 |
| 75 | GO:0008643: carbohydrate transport | 2.56E-02 |
| 76 | GO:0006508: proteolysis | 3.06E-02 |
| 77 | GO:0006857: oligopeptide transport | 3.14E-02 |
| 78 | GO:0048316: seed development | 3.45E-02 |
| 79 | GO:0009626: plant-type hypersensitive response | 3.53E-02 |
| 80 | GO:0009735: response to cytokinin | 3.96E-02 |
| 81 | GO:0051726: regulation of cell cycle | 4.01E-02 |
| 82 | GO:0042744: hydrogen peroxide catabolic process | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052751: GDP-mannose hydrolase activity | 0.00E+00 |
| 2 | GO:0047889: ferredoxin-nitrate reductase activity | 0.00E+00 |
| 3 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 4 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 5 | GO:0048307: ferredoxin-nitrite reductase activity | 0.00E+00 |
| 6 | GO:0050421: nitrite reductase (NO-forming) activity | 0.00E+00 |
| 7 | GO:0016851: magnesium chelatase activity | 5.58E-06 |
| 8 | GO:0005528: FK506 binding | 1.19E-05 |
| 9 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.22E-05 |
| 10 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.10E-04 |
| 11 | GO:0004831: tyrosine-tRNA ligase activity | 1.10E-04 |
| 12 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 4.25E-04 |
| 13 | GO:0016149: translation release factor activity, codon specific | 6.10E-04 |
| 14 | GO:0004659: prenyltransferase activity | 8.10E-04 |
| 15 | GO:0052793: pectin acetylesterase activity | 8.10E-04 |
| 16 | GO:0043495: protein anchor | 8.10E-04 |
| 17 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 8.10E-04 |
| 18 | GO:0019843: rRNA binding | 8.28E-04 |
| 19 | GO:0051920: peroxiredoxin activity | 1.49E-03 |
| 20 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 1.49E-03 |
| 21 | GO:0008235: metalloexopeptidase activity | 1.75E-03 |
| 22 | GO:0019899: enzyme binding | 1.75E-03 |
| 23 | GO:0016209: antioxidant activity | 2.03E-03 |
| 24 | GO:0004034: aldose 1-epimerase activity | 2.03E-03 |
| 25 | GO:0004601: peroxidase activity | 2.13E-03 |
| 26 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.32E-03 |
| 27 | GO:0003747: translation release factor activity | 2.62E-03 |
| 28 | GO:0004177: aminopeptidase activity | 3.59E-03 |
| 29 | GO:0004089: carbonate dehydratase activity | 4.30E-03 |
| 30 | GO:0003735: structural constituent of ribosome | 4.46E-03 |
| 31 | GO:0005509: calcium ion binding | 5.03E-03 |
| 32 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 6.40E-03 |
| 33 | GO:0022891: substrate-specific transmembrane transporter activity | 7.55E-03 |
| 34 | GO:0008514: organic anion transmembrane transporter activity | 8.00E-03 |
| 35 | GO:0004812: aminoacyl-tRNA ligase activity | 8.46E-03 |
| 36 | GO:0008080: N-acetyltransferase activity | 9.41E-03 |
| 37 | GO:0016853: isomerase activity | 9.91E-03 |
| 38 | GO:0004872: receptor activity | 1.04E-02 |
| 39 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.09E-02 |
| 40 | GO:0008237: metallopeptidase activity | 1.30E-02 |
| 41 | GO:0016168: chlorophyll binding | 1.47E-02 |
| 42 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.59E-02 |
| 43 | GO:0102483: scopolin beta-glucosidase activity | 1.59E-02 |
| 44 | GO:0008236: serine-type peptidase activity | 1.65E-02 |
| 45 | GO:0004222: metalloendopeptidase activity | 1.83E-02 |
| 46 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.83E-02 |
| 47 | GO:0008422: beta-glucosidase activity | 2.15E-02 |
| 48 | GO:0051537: 2 iron, 2 sulfur cluster binding | 2.56E-02 |
| 49 | GO:0015293: symporter activity | 2.63E-02 |
| 50 | GO:0003690: double-stranded DNA binding | 3.07E-02 |
| 51 | GO:0016491: oxidoreductase activity | 3.26E-02 |
| 52 | GO:0004650: polygalacturonase activity | 3.61E-02 |
| 53 | GO:0016746: transferase activity, transferring acyl groups | 3.93E-02 |
| 54 | GO:0004252: serine-type endopeptidase activity | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.42E-30 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 5.44E-25 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 7.05E-21 |
| 4 | GO:0031977: thylakoid lumen | 4.64E-16 |
| 5 | GO:0009579: thylakoid | 4.96E-16 |
| 6 | GO:0009570: chloroplast stroma | 9.67E-09 |
| 7 | GO:0009654: photosystem II oxygen evolving complex | 2.16E-07 |
| 8 | GO:0009941: chloroplast envelope | 8.18E-07 |
| 9 | GO:0009534: chloroplast thylakoid | 8.72E-07 |
| 10 | GO:0019898: extrinsic component of membrane | 1.20E-06 |
| 11 | GO:0010007: magnesium chelatase complex | 2.36E-06 |
| 12 | GO:0031969: chloroplast membrane | 5.49E-05 |
| 13 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.10E-04 |
| 14 | GO:0030095: chloroplast photosystem II | 2.61E-04 |
| 15 | GO:0042651: thylakoid membrane | 4.03E-04 |
| 16 | GO:0009528: plastid inner membrane | 4.25E-04 |
| 17 | GO:0009706: chloroplast inner membrane | 6.25E-04 |
| 18 | GO:0009527: plastid outer membrane | 8.10E-04 |
| 19 | GO:0009533: chloroplast stromal thylakoid | 1.75E-03 |
| 20 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.62E-03 |
| 21 | GO:0016021: integral component of membrane | 4.14E-03 |
| 22 | GO:0005840: ribosome | 6.11E-03 |
| 23 | GO:0015935: small ribosomal subunit | 6.67E-03 |
| 24 | GO:0009532: plastid stroma | 6.67E-03 |
| 25 | GO:0009523: photosystem II | 1.04E-02 |
| 26 | GO:0048046: apoplast | 1.27E-02 |
| 27 | GO:0010319: stromule | 1.30E-02 |
| 28 | GO:0009707: chloroplast outer membrane | 1.71E-02 |
| 29 | GO:0010287: plastoglobule | 4.34E-02 |