GO Enrichment Analysis of Co-expressed Genes with
AT5G19940
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 2 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 4 | GO:0015979: photosynthesis | 1.73E-12 |
| 5 | GO:0009773: photosynthetic electron transport in photosystem I | 1.39E-09 |
| 6 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.11E-06 |
| 7 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.41E-05 |
| 8 | GO:0015995: chlorophyll biosynthetic process | 2.10E-05 |
| 9 | GO:0018298: protein-chromophore linkage | 2.59E-05 |
| 10 | GO:0006546: glycine catabolic process | 2.61E-05 |
| 11 | GO:0045727: positive regulation of translation | 2.61E-05 |
| 12 | GO:0006810: transport | 4.35E-05 |
| 13 | GO:0010114: response to red light | 6.73E-05 |
| 14 | GO:0010019: chloroplast-nucleus signaling pathway | 8.69E-05 |
| 15 | GO:0010196: nonphotochemical quenching | 1.15E-04 |
| 16 | GO:0009409: response to cold | 1.70E-04 |
| 17 | GO:0009657: plastid organization | 1.85E-04 |
| 18 | GO:0032544: plastid translation | 1.85E-04 |
| 19 | GO:0071370: cellular response to gibberellin stimulus | 1.86E-04 |
| 20 | GO:0000481: maturation of 5S rRNA | 1.86E-04 |
| 21 | GO:0071461: cellular response to redox state | 1.86E-04 |
| 22 | GO:0034337: RNA folding | 1.86E-04 |
| 23 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.86E-04 |
| 24 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.86E-04 |
| 25 | GO:0010206: photosystem II repair | 2.25E-04 |
| 26 | GO:0009735: response to cytokinin | 2.63E-04 |
| 27 | GO:0009817: defense response to fungus, incompatible interaction | 3.68E-04 |
| 28 | GO:0010218: response to far red light | 4.18E-04 |
| 29 | GO:0080005: photosystem stoichiometry adjustment | 4.19E-04 |
| 30 | GO:1900871: chloroplast mRNA modification | 4.19E-04 |
| 31 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 4.19E-04 |
| 32 | GO:0009637: response to blue light | 5.00E-04 |
| 33 | GO:0005985: sucrose metabolic process | 6.03E-04 |
| 34 | GO:0006000: fructose metabolic process | 6.84E-04 |
| 35 | GO:0006518: peptide metabolic process | 6.84E-04 |
| 36 | GO:0045493: xylan catabolic process | 6.84E-04 |
| 37 | GO:0080170: hydrogen peroxide transmembrane transport | 9.77E-04 |
| 38 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 9.77E-04 |
| 39 | GO:1901332: negative regulation of lateral root development | 9.77E-04 |
| 40 | GO:2001141: regulation of RNA biosynthetic process | 9.77E-04 |
| 41 | GO:0046836: glycolipid transport | 9.77E-04 |
| 42 | GO:0051513: regulation of monopolar cell growth | 9.77E-04 |
| 43 | GO:0009152: purine ribonucleotide biosynthetic process | 9.77E-04 |
| 44 | GO:0046653: tetrahydrofolate metabolic process | 9.77E-04 |
| 45 | GO:2000122: negative regulation of stomatal complex development | 1.29E-03 |
| 46 | GO:0010037: response to carbon dioxide | 1.29E-03 |
| 47 | GO:0015976: carbon utilization | 1.29E-03 |
| 48 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.29E-03 |
| 49 | GO:0009765: photosynthesis, light harvesting | 1.29E-03 |
| 50 | GO:0015994: chlorophyll metabolic process | 1.29E-03 |
| 51 | GO:0042631: cellular response to water deprivation | 1.34E-03 |
| 52 | GO:0006461: protein complex assembly | 1.65E-03 |
| 53 | GO:0000302: response to reactive oxygen species | 1.77E-03 |
| 54 | GO:0042549: photosystem II stabilization | 2.03E-03 |
| 55 | GO:0009769: photosynthesis, light harvesting in photosystem II | 2.87E-03 |
| 56 | GO:0009645: response to low light intensity stimulus | 2.87E-03 |
| 57 | GO:0009772: photosynthetic electron transport in photosystem II | 2.87E-03 |
| 58 | GO:1900056: negative regulation of leaf senescence | 2.87E-03 |
| 59 | GO:0008152: metabolic process | 2.89E-03 |
| 60 | GO:0009819: drought recovery | 3.32E-03 |
| 61 | GO:0032508: DNA duplex unwinding | 3.32E-03 |
| 62 | GO:0055114: oxidation-reduction process | 3.63E-03 |
| 63 | GO:0006002: fructose 6-phosphate metabolic process | 3.80E-03 |
| 64 | GO:0071482: cellular response to light stimulus | 3.80E-03 |
| 65 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 4.30E-03 |
| 66 | GO:0009051: pentose-phosphate shunt, oxidative branch | 4.30E-03 |
| 67 | GO:0034599: cellular response to oxidative stress | 4.37E-03 |
| 68 | GO:0010205: photoinhibition | 4.82E-03 |
| 69 | GO:0009638: phototropism | 4.82E-03 |
| 70 | GO:0042742: defense response to bacterium | 4.87E-03 |
| 71 | GO:0006949: syncytium formation | 5.36E-03 |
| 72 | GO:0009658: chloroplast organization | 5.38E-03 |
| 73 | GO:0019684: photosynthesis, light reaction | 5.92E-03 |
| 74 | GO:0009089: lysine biosynthetic process via diaminopimelate | 5.92E-03 |
| 75 | GO:0043085: positive regulation of catalytic activity | 5.92E-03 |
| 76 | GO:0006352: DNA-templated transcription, initiation | 5.92E-03 |
| 77 | GO:0000272: polysaccharide catabolic process | 5.92E-03 |
| 78 | GO:0018119: peptidyl-cysteine S-nitrosylation | 5.92E-03 |
| 79 | GO:0010015: root morphogenesis | 5.92E-03 |
| 80 | GO:0009664: plant-type cell wall organization | 6.76E-03 |
| 81 | GO:0006006: glucose metabolic process | 7.11E-03 |
| 82 | GO:0006094: gluconeogenesis | 7.11E-03 |
| 83 | GO:0005986: sucrose biosynthetic process | 7.11E-03 |
| 84 | GO:0006364: rRNA processing | 7.26E-03 |
| 85 | GO:0019253: reductive pentose-phosphate cycle | 7.73E-03 |
| 86 | GO:0010207: photosystem II assembly | 7.73E-03 |
| 87 | GO:0010030: positive regulation of seed germination | 8.37E-03 |
| 88 | GO:0006636: unsaturated fatty acid biosynthetic process | 9.03E-03 |
| 89 | GO:0006833: water transport | 9.03E-03 |
| 90 | GO:0007017: microtubule-based process | 1.04E-02 |
| 91 | GO:0048511: rhythmic process | 1.11E-02 |
| 92 | GO:0061077: chaperone-mediated protein folding | 1.11E-02 |
| 93 | GO:0009269: response to desiccation | 1.11E-02 |
| 94 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.26E-02 |
| 95 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.42E-02 |
| 96 | GO:0042744: hydrogen peroxide catabolic process | 1.48E-02 |
| 97 | GO:0080022: primary root development | 1.50E-02 |
| 98 | GO:0034220: ion transmembrane transport | 1.50E-02 |
| 99 | GO:0042752: regulation of circadian rhythm | 1.66E-02 |
| 100 | GO:0007623: circadian rhythm | 1.79E-02 |
| 101 | GO:0002229: defense response to oomycetes | 1.83E-02 |
| 102 | GO:0010193: response to ozone | 1.83E-02 |
| 103 | GO:0030163: protein catabolic process | 2.01E-02 |
| 104 | GO:1901657: glycosyl compound metabolic process | 2.01E-02 |
| 105 | GO:0009828: plant-type cell wall loosening | 2.10E-02 |
| 106 | GO:0042128: nitrate assimilation | 2.58E-02 |
| 107 | GO:0010411: xyloglucan metabolic process | 2.67E-02 |
| 108 | GO:0010311: lateral root formation | 2.98E-02 |
| 109 | GO:0009407: toxin catabolic process | 3.08E-02 |
| 110 | GO:0009631: cold acclimation | 3.19E-02 |
| 111 | GO:0010119: regulation of stomatal movement | 3.19E-02 |
| 112 | GO:0009853: photorespiration | 3.40E-02 |
| 113 | GO:0045454: cell redox homeostasis | 4.12E-02 |
| 114 | GO:0009644: response to high light intensity | 4.31E-02 |
| 115 | GO:0009636: response to toxic substance | 4.43E-02 |
| 116 | GO:0032259: methylation | 4.85E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 2 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 3 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 4 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 5 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 6 | GO:0031409: pigment binding | 6.88E-07 |
| 7 | GO:0016168: chlorophyll binding | 1.68E-05 |
| 8 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.61E-05 |
| 9 | GO:0004130: cytochrome-c peroxidase activity | 6.24E-05 |
| 10 | GO:0004017: adenylate kinase activity | 8.69E-05 |
| 11 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 1.86E-04 |
| 12 | GO:0045485: omega-6 fatty acid desaturase activity | 1.86E-04 |
| 13 | GO:0046906: tetrapyrrole binding | 1.86E-04 |
| 14 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 4.19E-04 |
| 15 | GO:0047746: chlorophyllase activity | 4.19E-04 |
| 16 | GO:0016868: intramolecular transferase activity, phosphotransferases | 4.19E-04 |
| 17 | GO:0010297: heteropolysaccharide binding | 4.19E-04 |
| 18 | GO:0004047: aminomethyltransferase activity | 4.19E-04 |
| 19 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 4.19E-04 |
| 20 | GO:0008266: poly(U) RNA binding | 5.38E-04 |
| 21 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 6.84E-04 |
| 22 | GO:0008864: formyltetrahydrofolate deformylase activity | 6.84E-04 |
| 23 | GO:0004324: ferredoxin-NADP+ reductase activity | 6.84E-04 |
| 24 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 6.84E-04 |
| 25 | GO:0005528: FK506 binding | 7.41E-04 |
| 26 | GO:0051537: 2 iron, 2 sulfur cluster binding | 7.60E-04 |
| 27 | GO:0016851: magnesium chelatase activity | 9.77E-04 |
| 28 | GO:0017089: glycolipid transporter activity | 9.77E-04 |
| 29 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 9.77E-04 |
| 30 | GO:0019201: nucleotide kinase activity | 9.77E-04 |
| 31 | GO:1990137: plant seed peroxidase activity | 1.29E-03 |
| 32 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.29E-03 |
| 33 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.29E-03 |
| 34 | GO:0001053: plastid sigma factor activity | 1.29E-03 |
| 35 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.29E-03 |
| 36 | GO:0051861: glycolipid binding | 1.29E-03 |
| 37 | GO:0016987: sigma factor activity | 1.29E-03 |
| 38 | GO:0050662: coenzyme binding | 1.54E-03 |
| 39 | GO:0003959: NADPH dehydrogenase activity | 1.65E-03 |
| 40 | GO:0048038: quinone binding | 1.77E-03 |
| 41 | GO:0016688: L-ascorbate peroxidase activity | 2.03E-03 |
| 42 | GO:0019843: rRNA binding | 2.06E-03 |
| 43 | GO:0004602: glutathione peroxidase activity | 2.43E-03 |
| 44 | GO:0051920: peroxiredoxin activity | 2.43E-03 |
| 45 | GO:0019899: enzyme binding | 2.87E-03 |
| 46 | GO:0004564: beta-fructofuranosidase activity | 3.32E-03 |
| 47 | GO:0016209: antioxidant activity | 3.32E-03 |
| 48 | GO:0004575: sucrose alpha-glucosidase activity | 4.82E-03 |
| 49 | GO:0016787: hydrolase activity | 5.92E-03 |
| 50 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 6.28E-03 |
| 51 | GO:0046872: metal ion binding | 6.55E-03 |
| 52 | GO:0004089: carbonate dehydratase activity | 7.11E-03 |
| 53 | GO:0031072: heat shock protein binding | 7.11E-03 |
| 54 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 9.08E-03 |
| 55 | GO:0004176: ATP-dependent peptidase activity | 1.11E-02 |
| 56 | GO:0030570: pectate lyase activity | 1.26E-02 |
| 57 | GO:0003756: protein disulfide isomerase activity | 1.34E-02 |
| 58 | GO:0003727: single-stranded RNA binding | 1.34E-02 |
| 59 | GO:0004518: nuclease activity | 1.92E-02 |
| 60 | GO:0016791: phosphatase activity | 2.10E-02 |
| 61 | GO:0008483: transaminase activity | 2.19E-02 |
| 62 | GO:0005200: structural constituent of cytoskeleton | 2.19E-02 |
| 63 | GO:0015250: water channel activity | 2.38E-02 |
| 64 | GO:0016491: oxidoreductase activity | 2.60E-02 |
| 65 | GO:0102483: scopolin beta-glucosidase activity | 2.67E-02 |
| 66 | GO:0004601: peroxidase activity | 2.78E-02 |
| 67 | GO:0008236: serine-type peptidase activity | 2.78E-02 |
| 68 | GO:0005096: GTPase activator activity | 2.98E-02 |
| 69 | GO:0004222: metalloendopeptidase activity | 3.08E-02 |
| 70 | GO:0003993: acid phosphatase activity | 3.51E-02 |
| 71 | GO:0008422: beta-glucosidase activity | 3.63E-02 |
| 72 | GO:0050661: NADP binding | 3.74E-02 |
| 73 | GO:0004364: glutathione transferase activity | 3.96E-02 |
| 74 | GO:0004185: serine-type carboxypeptidase activity | 4.08E-02 |
| 75 | GO:0004871: signal transducer activity | 4.31E-02 |
| 76 | GO:0043621: protein self-association | 4.31E-02 |
| 77 | GO:0005198: structural molecule activity | 4.43E-02 |
| 78 | GO:0004722: protein serine/threonine phosphatase activity | 4.51E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.09E-36 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 3.37E-36 |
| 5 | GO:0009534: chloroplast thylakoid | 2.46E-34 |
| 6 | GO:0009941: chloroplast envelope | 3.58E-23 |
| 7 | GO:0009570: chloroplast stroma | 5.63E-19 |
| 8 | GO:0009579: thylakoid | 1.21E-13 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 1.14E-10 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.05E-10 |
| 11 | GO:0010287: plastoglobule | 7.46E-08 |
| 12 | GO:0009523: photosystem II | 1.39E-07 |
| 13 | GO:0030095: chloroplast photosystem II | 4.03E-07 |
| 14 | GO:0009522: photosystem I | 5.03E-06 |
| 15 | GO:0010319: stromule | 1.18E-05 |
| 16 | GO:0042651: thylakoid membrane | 4.57E-05 |
| 17 | GO:0031977: thylakoid lumen | 5.78E-05 |
| 18 | GO:0009533: chloroplast stromal thylakoid | 1.15E-04 |
| 19 | GO:0009783: photosystem II antenna complex | 1.86E-04 |
| 20 | GO:0009706: chloroplast inner membrane | 2.15E-04 |
| 21 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 4.19E-04 |
| 22 | GO:0030076: light-harvesting complex | 6.03E-04 |
| 23 | GO:0010007: magnesium chelatase complex | 6.84E-04 |
| 24 | GO:0009654: photosystem II oxygen evolving complex | 8.15E-04 |
| 25 | GO:0005960: glycine cleavage complex | 9.77E-04 |
| 26 | GO:0009531: secondary cell wall | 9.77E-04 |
| 27 | GO:0005775: vacuolar lumen | 9.77E-04 |
| 28 | GO:0009517: PSII associated light-harvesting complex II | 1.29E-03 |
| 29 | GO:0031969: chloroplast membrane | 1.38E-03 |
| 30 | GO:0019898: extrinsic component of membrane | 1.65E-03 |
| 31 | GO:0048046: apoplast | 1.99E-03 |
| 32 | GO:0009538: photosystem I reaction center | 3.32E-03 |
| 33 | GO:0005811: lipid particle | 3.80E-03 |
| 34 | GO:0042644: chloroplast nucleoid | 4.30E-03 |
| 35 | GO:0045298: tubulin complex | 4.30E-03 |
| 36 | GO:0032040: small-subunit processome | 6.51E-03 |
| 37 | GO:0009508: plastid chromosome | 7.11E-03 |
| 38 | GO:0009295: nucleoid | 2.19E-02 |
| 39 | GO:0009505: plant-type cell wall | 2.42E-02 |
| 40 | GO:0000325: plant-type vacuole | 3.19E-02 |
| 41 | GO:0015934: large ribosomal subunit | 3.19E-02 |
| 42 | GO:0031902: late endosome membrane | 3.85E-02 |
| 43 | GO:0016020: membrane | 4.08E-02 |