Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G19900

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0048024: regulation of mRNA splicing, via spliceosome0.00E+00
2GO:0010477: response to sulfur dioxide0.00E+00
3GO:0006376: mRNA splice site selection1.87E-05
4GO:0045910: negative regulation of DNA recombination8.61E-05
5GO:2000034: regulation of seed maturation8.61E-05
6GO:0080119: ER body organization1.30E-04
7GO:1901000: regulation of response to salt stress1.30E-04
8GO:0015994: chlorophyll metabolic process1.78E-04
9GO:0010311: lateral root formation1.82E-04
10GO:0007029: endoplasmic reticulum organization2.30E-04
11GO:0032876: negative regulation of DNA endoreduplication2.30E-04
12GO:0048232: male gamete generation2.85E-04
13GO:0009861: jasmonic acid and ethylene-dependent systemic resistance3.42E-04
14GO:0098869: cellular oxidant detoxification4.02E-04
15GO:0007140: male meiotic nuclear division4.64E-04
16GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process6.61E-04
17GO:0009638: phototropism6.61E-04
18GO:0009641: shade avoidance7.30E-04
19GO:0006511: ubiquitin-dependent protein catabolic process7.72E-04
20GO:0008361: regulation of cell size8.75E-04
21GO:0006790: sulfur compound metabolic process8.75E-04
22GO:0016567: protein ubiquitination9.12E-04
23GO:0009785: blue light signaling pathway9.49E-04
24GO:0010030: positive regulation of seed germination1.10E-03
25GO:0007030: Golgi organization1.10E-03
26GO:0009901: anther dehiscence1.10E-03
27GO:0042023: DNA endoreduplication1.18E-03
28GO:0003333: amino acid transmembrane transport1.44E-03
29GO:0031348: negative regulation of defense response1.52E-03
30GO:0009625: response to insect1.61E-03
31GO:0048366: leaf development1.63E-03
32GO:0010091: trichome branching1.70E-03
33GO:0048443: stamen development1.70E-03
34GO:0010118: stomatal movement1.89E-03
35GO:0000226: microtubule cytoskeleton organization1.89E-03
36GO:0007059: chromosome segregation2.09E-03
37GO:0000302: response to reactive oxygen species2.29E-03
38GO:0016032: viral process2.40E-03
39GO:0009630: gravitropism2.40E-03
40GO:0048364: root development2.61E-03
41GO:0016579: protein deubiquitination2.82E-03
42GO:0042128: nitrate assimilation3.16E-03
43GO:0006888: ER to Golgi vesicle-mediated transport3.28E-03
44GO:0016049: cell growth3.40E-03
45GO:0009734: auxin-activated signaling pathway3.50E-03
46GO:0010218: response to far red light3.76E-03
47GO:0048527: lateral root development3.88E-03
48GO:0009908: flower development3.98E-03
49GO:0009867: jasmonic acid mediated signaling pathway4.13E-03
50GO:0034599: cellular response to oxidative stress4.26E-03
51GO:0008283: cell proliferation4.91E-03
52GO:0010114: response to red light4.91E-03
53GO:0031347: regulation of defense response5.60E-03
54GO:0010224: response to UV-B6.17E-03
55GO:0009909: regulation of flower development6.46E-03
56GO:0048367: shoot system development6.91E-03
57GO:0042744: hydrogen peroxide catabolic process9.85E-03
58GO:0040008: regulation of growth1.09E-02
59GO:0009723: response to ethylene1.70E-02
60GO:0007275: multicellular organism development1.76E-02
61GO:0010200: response to chitin1.83E-02
62GO:0045892: negative regulation of transcription, DNA-templated2.06E-02
63GO:0006886: intracellular protein transport2.08E-02
64GO:0009753: response to jasmonic acid2.48E-02
65GO:0009873: ethylene-activated signaling pathway2.83E-02
66GO:0009735: response to cytokinin3.33E-02
67GO:0009611: response to wounding3.61E-02
68GO:0045893: positive regulation of transcription, DNA-templated3.92E-02
69GO:0055085: transmembrane transport4.21E-02
70GO:0006414: translational elongation4.72E-02
71GO:0006952: defense response4.93E-02
RankGO TermAdjusted P value
1GO:0008482: sulfite oxidase activity0.00E+00
2GO:0030151: molybdenum ion binding2.30E-04
3GO:0004842: ubiquitin-protein transferase activity2.71E-04
4GO:0016688: L-ascorbate peroxidase activity2.85E-04
5GO:0004130: cytochrome-c peroxidase activity2.85E-04
6GO:0005515: protein binding3.70E-04
7GO:0015174: basic amino acid transmembrane transporter activity6.61E-04
8GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.44E-03
9GO:0004843: thiol-dependent ubiquitin-specific protease activity2.29E-03
10GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.72E-03
11GO:0003746: translation elongation factor activity4.13E-03
12GO:0004712: protein serine/threonine/tyrosine kinase activity4.38E-03
13GO:0008270: zinc ion binding6.29E-03
14GO:0015171: amino acid transmembrane transporter activity6.46E-03
15GO:0005516: calmodulin binding6.61E-03
16GO:0016874: ligase activity7.38E-03
17GO:0008026: ATP-dependent helicase activity8.01E-03
18GO:0003729: mRNA binding1.33E-02
19GO:0042626: ATPase activity, coupled to transmembrane movement of substances1.34E-02
20GO:0000166: nucleotide binding3.55E-02
21GO:0004674: protein serine/threonine kinase activity4.39E-02
22GO:0016301: kinase activity4.39E-02
RankGO TermAdjusted P value
1GO:0035061: interchromatin granule4.85E-05
2GO:0046861: glyoxysomal membrane8.61E-05
3GO:0019005: SCF ubiquitin ligase complex1.72E-04
4GO:0030127: COPII vesicle coat2.85E-04
5GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane4.02E-04
6GO:0009514: glyoxysome5.27E-04
7GO:0005777: peroxisome6.27E-04
8GO:0080008: Cul4-RING E3 ubiquitin ligase complex1.52E-03
9GO:0005778: peroxisomal membrane2.72E-03
10GO:0000151: ubiquitin ligase complex3.51E-03
11GO:0005819: spindle4.38E-03
12GO:0005634: nucleus5.60E-03
13GO:0005681: spliceosomal complex6.76E-03
14GO:0016607: nuclear speck6.91E-03
15GO:0005834: heterotrimeric G-protein complex7.07E-03
16GO:0009524: phragmoplast9.33E-03
17GO:0009705: plant-type vacuole membrane1.13E-02
18GO:0005774: vacuolar membrane3.10E-02
19GO:0005886: plasma membrane3.13E-02
20GO:0005773: vacuole4.73E-02
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Gene type



Gene DE type