co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G19090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033614: chloroplast proton-transporting ATP synthase complex assembly	0.00E+00
2	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
3	GO:0099131: ATP hydrolysis coupled ion transmembrane transport	0.00E+00
4	GO:0002184: cytoplasmic translational termination	0.00E+00
5	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
6	GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation	0.00E+00
7	GO:0007638: mechanosensory behavior	0.00E+00
8	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
9	GO:2000605: positive regulation of secondary growth	0.00E+00
10	GO:0043266: regulation of potassium ion transport	1.88E-04
11	GO:0010480: microsporocyte differentiation	1.88E-04
12	GO:0031338: regulation of vesicle fusion	1.88E-04
13	GO:2000021: regulation of ion homeostasis	1.88E-04
14	GO:0010729: positive regulation of hydrogen peroxide biosynthetic process	1.88E-04
15	GO:0010541: acropetal auxin transport	4.24E-04
16	GO:0010424: DNA methylation on cytosine within a CG sequence	4.24E-04
17	GO:0010069: zygote asymmetric cytokinesis in embryo sac	4.24E-04
18	GO:0006633: fatty acid biosynthetic process	4.58E-04
19	GO:0010160: formation of animal organ boundary	6.92E-04
20	GO:0006518: peptide metabolic process	6.92E-04
21	GO:0090630: activation of GTPase activity	6.92E-04
22	GO:2001295: malonyl-CoA biosynthetic process	6.92E-04
23	GO:0009226: nucleotide-sugar biosynthetic process	9.86E-04
24	GO:0006424: glutamyl-tRNA aminoacylation	9.86E-04
25	GO:0055070: copper ion homeostasis	9.86E-04
26	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	9.86E-04
27	GO:0007231: osmosensory signaling pathway	9.86E-04
28	GO:0051639: actin filament network formation	9.86E-04
29	GO:0043481: anthocyanin accumulation in tissues in response to UV light	9.86E-04
30	GO:0051016: barbed-end actin filament capping	9.86E-04
31	GO:0033500: carbohydrate homeostasis	1.31E-03
32	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.31E-03
33	GO:0051764: actin crosslink formation	1.31E-03
34	GO:0000304: response to singlet oxygen	1.66E-03
35	GO:0032543: mitochondrial translation	1.66E-03
36	GO:0035434: copper ion transmembrane transport	1.66E-03
37	GO:0016123: xanthophyll biosynthetic process	1.66E-03
38	GO:0006655: phosphatidylglycerol biosynthetic process	2.05E-03
39	GO:0060918: auxin transport	2.05E-03
40	GO:0006796: phosphate-containing compound metabolic process	2.05E-03
41	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	2.05E-03
42	GO:0006751: glutathione catabolic process	2.05E-03
43	GO:0042549: photosystem II stabilization	2.05E-03
44	GO:0010027: thylakoid membrane organization	2.58E-03
45	GO:0051693: actin filament capping	2.90E-03
46	GO:0048437: floral organ development	2.90E-03
47	GO:0015995: chlorophyll biosynthetic process	3.04E-03
48	GO:0045490: pectin catabolic process	3.16E-03
49	GO:0008610: lipid biosynthetic process	3.36E-03
50	GO:0009817: defense response to fungus, incompatible interaction	3.36E-03
51	GO:0032544: plastid translation	3.84E-03
52	GO:0071482: cellular response to light stimulus	3.84E-03
53	GO:0009657: plastid organization	3.84E-03
54	GO:0010206: photosystem II repair	4.35E-03
55	GO:0000902: cell morphogenesis	4.35E-03
56	GO:0030001: metal ion transport	4.84E-03
57	GO:0006349: regulation of gene expression by genetic imprinting	4.87E-03
58	GO:0006779: porphyrin-containing compound biosynthetic process	4.87E-03
59	GO:1900865: chloroplast RNA modification	4.87E-03
60	GO:0006782: protoporphyrinogen IX biosynthetic process	5.42E-03
61	GO:0006415: translational termination	5.99E-03
62	GO:1903507: negative regulation of nucleic acid-templated transcription	5.99E-03
63	GO:0018119: peptidyl-cysteine S-nitrosylation	5.99E-03
64	GO:0048229: gametophyte development	5.99E-03
65	GO:0010216: maintenance of DNA methylation	5.99E-03
66	GO:0009684: indoleacetic acid biosynthetic process	5.99E-03
67	GO:0046856: phosphatidylinositol dephosphorylation	5.99E-03
68	GO:0006816: calcium ion transport	5.99E-03
69	GO:0008361: regulation of cell size	6.58E-03
70	GO:0006820: anion transport	6.58E-03
71	GO:0016024: CDP-diacylglycerol biosynthetic process	6.58E-03
72	GO:0030036: actin cytoskeleton organization	7.19E-03
73	GO:0010075: regulation of meristem growth	7.19E-03
74	GO:0009767: photosynthetic electron transport chain	7.19E-03
75	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	7.54E-03
76	GO:0007015: actin filament organization	7.82E-03
77	GO:0010540: basipetal auxin transport	7.82E-03
78	GO:0009934: regulation of meristem structural organization	7.82E-03
79	GO:0010030: positive regulation of seed germination	8.47E-03
80	GO:0070588: calcium ion transmembrane transport	8.47E-03
81	GO:0051017: actin filament bundle assembly	9.83E-03
82	GO:0007010: cytoskeleton organization	9.83E-03
83	GO:0042545: cell wall modification	1.02E-02
84	GO:0005975: carbohydrate metabolic process	1.04E-02
85	GO:0007017: microtubule-based process	1.05E-02
86	GO:0009742: brassinosteroid mediated signaling pathway	1.12E-02
87	GO:0031408: oxylipin biosynthetic process	1.13E-02
88	GO:0016042: lipid catabolic process	1.14E-02
89	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.20E-02
90	GO:0009294: DNA mediated transformation	1.28E-02
91	GO:0008152: metabolic process	1.34E-02
92	GO:0009306: protein secretion	1.35E-02
93	GO:0048443: stamen development	1.35E-02
94	GO:0006284: base-excision repair	1.35E-02
95	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.43E-02
96	GO:0048653: anther development	1.51E-02
97	GO:0042631: cellular response to water deprivation	1.51E-02
98	GO:0009958: positive gravitropism	1.60E-02
99	GO:0048868: pollen tube development	1.60E-02
100	GO:0080156: mitochondrial mRNA modification	1.85E-02
101	GO:0071554: cell wall organization or biogenesis	1.85E-02
102	GO:0002229: defense response to oomycetes	1.85E-02
103	GO:1901657: glycosyl compound metabolic process	2.03E-02
104	GO:0009639: response to red or far red light	2.13E-02
105	GO:0016125: sterol metabolic process	2.13E-02
106	GO:0016126: sterol biosynthetic process	2.41E-02
107	GO:0009658: chloroplast organization	2.83E-02
108	GO:0006811: ion transport	3.12E-02
109	GO:0010218: response to far red light	3.12E-02
110	GO:0048527: lateral root development	3.23E-02
111	GO:0009910: negative regulation of flower development	3.23E-02
112	GO:0009723: response to ethylene	3.27E-02
113	GO:0009637: response to blue light	3.45E-02
114	GO:0046777: protein autophosphorylation	3.74E-02
115	GO:0006839: mitochondrial transport	3.78E-02
116	GO:0009640: photomorphogenesis	4.13E-02
117	GO:0009926: auxin polar transport	4.13E-02
118	GO:0031347: regulation of defense response	4.73E-02
119	GO:0042538: hyperosmotic salinity response	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
2	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
3	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
4	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
5	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
6	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
7	GO:0004496: mevalonate kinase activity	0.00E+00
8	GO:0008200: ion channel inhibitor activity	6.36E-05
9	GO:0004856: xylulokinase activity	1.88E-04
10	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	1.88E-04
11	GO:0003867: 4-aminobutyrate transaminase activity	1.88E-04
12	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	4.24E-04
13	GO:0004802: transketolase activity	4.24E-04
14	GO:0003839: gamma-glutamylcyclotransferase activity	4.24E-04
15	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	4.24E-04
16	GO:0004565: beta-galactosidase activity	4.86E-04
17	GO:0004075: biotin carboxylase activity	6.92E-04
18	GO:0030267: glyoxylate reductase (NADP) activity	6.92E-04
19	GO:0016531: copper chaperone activity	6.92E-04
20	GO:0019829: cation-transporting ATPase activity	6.92E-04
21	GO:0016149: translation release factor activity, codon specific	9.86E-04
22	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	9.86E-04
23	GO:0043023: ribosomal large subunit binding	9.86E-04
24	GO:0004445: inositol-polyphosphate 5-phosphatase activity	9.86E-04
25	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.31E-03
26	GO:0008526: phosphatidylinositol transporter activity	1.31E-03
27	GO:0016836: hydro-lyase activity	1.31E-03
28	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.31E-03
29	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.31E-03
30	GO:0017137: Rab GTPase binding	1.66E-03
31	GO:0004040: amidase activity	1.66E-03
32	GO:0003989: acetyl-CoA carboxylase activity	1.66E-03
33	GO:0008725: DNA-3-methyladenine glycosylase activity	1.66E-03
34	GO:0008381: mechanically-gated ion channel activity	1.66E-03
35	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.66E-03
36	GO:0051015: actin filament binding	2.04E-03
37	GO:0042578: phosphoric ester hydrolase activity	2.05E-03
38	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	2.05E-03
39	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.05E-03
40	GO:0003886: DNA (cytosine-5-)-methyltransferase activity	2.46E-03
41	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.46E-03
42	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.46E-03
43	GO:0051920: peroxiredoxin activity	2.46E-03
44	GO:0015631: tubulin binding	2.46E-03
45	GO:0004620: phospholipase activity	2.90E-03
46	GO:0004427: inorganic diphosphatase activity	2.90E-03
47	GO:0004033: aldo-keto reductase (NADP) activity	3.36E-03
48	GO:0043022: ribosome binding	3.36E-03
49	GO:0016209: antioxidant activity	3.36E-03
50	GO:0005375: copper ion transmembrane transporter activity	3.84E-03
51	GO:0003747: translation release factor activity	4.35E-03
52	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	4.35E-03
53	GO:0016788: hydrolase activity, acting on ester bonds	5.63E-03
54	GO:0008378: galactosyltransferase activity	6.58E-03
55	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	6.58E-03
56	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.19E-03
57	GO:0005262: calcium channel activity	7.19E-03
58	GO:0010329: auxin efflux transmembrane transporter activity	7.19E-03
59	GO:0045330: aspartyl esterase activity	8.18E-03
60	GO:0052689: carboxylic ester hydrolase activity	8.21E-03
61	GO:0003714: transcription corepressor activity	9.83E-03
62	GO:0005528: FK506 binding	9.83E-03
63	GO:0030599: pectinesterase activity	9.91E-03
64	GO:0008324: cation transmembrane transporter activity	1.05E-02
65	GO:0033612: receptor serine/threonine kinase binding	1.13E-02
66	GO:0030570: pectate lyase activity	1.28E-02
67	GO:0048038: quinone binding	1.85E-02
68	GO:0005200: structural constituent of cytoskeleton	2.22E-02
69	GO:0016597: amino acid binding	2.31E-02
70	GO:0016413: O-acetyltransferase activity	2.31E-02
71	GO:0016491: oxidoreductase activity	2.67E-02
72	GO:0004721: phosphoprotein phosphatase activity	2.71E-02
73	GO:0102483: scopolin beta-glucosidase activity	2.71E-02
74	GO:0008168: methyltransferase activity	2.72E-02
75	GO:0008236: serine-type peptidase activity	2.81E-02
76	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.91E-02
77	GO:0005096: GTPase activator activity	3.02E-02
78	GO:0004222: metalloendopeptidase activity	3.12E-02
79	GO:0030145: manganese ion binding	3.23E-02
80	GO:0008422: beta-glucosidase activity	3.67E-02
81	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.60E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0009507: chloroplast	9.10E-14
3	GO:0009941: chloroplast envelope	2.50E-08
4	GO:0009570: chloroplast stroma	3.52E-08
5	GO:0009534: chloroplast thylakoid	1.39E-05
6	GO:0009579: thylakoid	9.43E-05
7	GO:0009536: plastid	1.35E-04
8	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	1.88E-04
9	GO:0005884: actin filament	3.73E-04
10	GO:0008290: F-actin capping protein complex	4.24E-04
11	GO:0009505: plant-type cell wall	5.94E-04
12	GO:0009535: chloroplast thylakoid membrane	6.52E-04
13	GO:0032432: actin filament bundle	9.86E-04
14	GO:0009543: chloroplast thylakoid lumen	2.10E-03
15	GO:0045298: tubulin complex	4.35E-03
16	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	4.35E-03
17	GO:0031977: thylakoid lumen	5.05E-03
18	GO:0009508: plastid chromosome	7.19E-03
19	GO:0031969: chloroplast membrane	7.22E-03
20	GO:0005618: cell wall	7.29E-03
21	GO:0043234: protein complex	9.14E-03
22	GO:0009295: nucleoid	2.22E-02
23	GO:0009707: chloroplast outer membrane	2.91E-02
24	GO:0005874: microtubule	3.38E-02
25	GO:0005886: plasma membrane	3.95E-02
26	GO:0048046: apoplast	4.52E-02
27	GO:0016021: integral component of membrane	4.66E-02