GO Enrichment Analysis of Co-expressed Genes with
AT5G18570
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 2 | GO:0042407: cristae formation | 0.00E+00 |
| 3 | GO:0006223: uracil salvage | 0.00E+00 |
| 4 | GO:0060416: response to growth hormone | 0.00E+00 |
| 5 | GO:1901259: chloroplast rRNA processing | 7.88E-08 |
| 6 | GO:0032544: plastid translation | 3.00E-07 |
| 7 | GO:0010027: thylakoid membrane organization | 7.58E-07 |
| 8 | GO:0015995: chlorophyll biosynthetic process | 1.10E-06 |
| 9 | GO:0006412: translation | 3.34E-06 |
| 10 | GO:0009658: chloroplast organization | 6.92E-06 |
| 11 | GO:0006353: DNA-templated transcription, termination | 3.06E-05 |
| 12 | GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process | 6.74E-05 |
| 13 | GO:1902458: positive regulation of stomatal opening | 6.74E-05 |
| 14 | GO:0034337: RNA folding | 6.74E-05 |
| 15 | GO:0006434: seryl-tRNA aminoacylation | 6.74E-05 |
| 16 | GO:0006438: valyl-tRNA aminoacylation | 6.74E-05 |
| 17 | GO:0045037: protein import into chloroplast stroma | 9.94E-05 |
| 18 | GO:0018026: peptidyl-lysine monomethylation | 1.62E-04 |
| 19 | GO:0080148: negative regulation of response to water deprivation | 1.62E-04 |
| 20 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.62E-04 |
| 21 | GO:0043039: tRNA aminoacylation | 1.62E-04 |
| 22 | GO:0006423: cysteinyl-tRNA aminoacylation | 1.62E-04 |
| 23 | GO:0007005: mitochondrion organization | 2.53E-04 |
| 24 | GO:0010581: regulation of starch biosynthetic process | 2.75E-04 |
| 25 | GO:0006954: inflammatory response | 2.75E-04 |
| 26 | GO:0009306: protein secretion | 3.02E-04 |
| 27 | GO:0051085: chaperone mediated protein folding requiring cofactor | 3.98E-04 |
| 28 | GO:0010239: chloroplast mRNA processing | 3.98E-04 |
| 29 | GO:0006241: CTP biosynthetic process | 3.98E-04 |
| 30 | GO:0006165: nucleoside diphosphate phosphorylation | 3.98E-04 |
| 31 | GO:0006228: UTP biosynthetic process | 3.98E-04 |
| 32 | GO:0016556: mRNA modification | 3.98E-04 |
| 33 | GO:0032502: developmental process | 5.01E-04 |
| 34 | GO:0006021: inositol biosynthetic process | 5.32E-04 |
| 35 | GO:0006183: GTP biosynthetic process | 5.32E-04 |
| 36 | GO:0044206: UMP salvage | 5.32E-04 |
| 37 | GO:0006749: glutathione metabolic process | 5.32E-04 |
| 38 | GO:0006564: L-serine biosynthetic process | 6.73E-04 |
| 39 | GO:0045038: protein import into chloroplast thylakoid membrane | 6.73E-04 |
| 40 | GO:0009247: glycolipid biosynthetic process | 6.73E-04 |
| 41 | GO:0043097: pyrimidine nucleoside salvage | 6.73E-04 |
| 42 | GO:0006206: pyrimidine nucleobase metabolic process | 8.23E-04 |
| 43 | GO:0046855: inositol phosphate dephosphorylation | 8.23E-04 |
| 44 | GO:0042793: transcription from plastid promoter | 8.23E-04 |
| 45 | GO:0042254: ribosome biogenesis | 9.62E-04 |
| 46 | GO:0009955: adaxial/abaxial pattern specification | 9.79E-04 |
| 47 | GO:0042026: protein refolding | 9.79E-04 |
| 48 | GO:0042372: phylloquinone biosynthetic process | 9.79E-04 |
| 49 | GO:0006955: immune response | 1.14E-03 |
| 50 | GO:0006605: protein targeting | 1.32E-03 |
| 51 | GO:0019375: galactolipid biosynthetic process | 1.32E-03 |
| 52 | GO:0009704: de-etiolation | 1.32E-03 |
| 53 | GO:2000070: regulation of response to water deprivation | 1.32E-03 |
| 54 | GO:0042255: ribosome assembly | 1.32E-03 |
| 55 | GO:0015979: photosynthesis | 1.44E-03 |
| 56 | GO:0022900: electron transport chain | 1.50E-03 |
| 57 | GO:0009657: plastid organization | 1.50E-03 |
| 58 | GO:0019430: removal of superoxide radicals | 1.50E-03 |
| 59 | GO:0006783: heme biosynthetic process | 1.69E-03 |
| 60 | GO:0043067: regulation of programmed cell death | 1.89E-03 |
| 61 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.89E-03 |
| 62 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.10E-03 |
| 63 | GO:0006415: translational termination | 2.31E-03 |
| 64 | GO:0009089: lysine biosynthetic process via diaminopimelate | 2.31E-03 |
| 65 | GO:0009073: aromatic amino acid family biosynthetic process | 2.31E-03 |
| 66 | GO:0043085: positive regulation of catalytic activity | 2.31E-03 |
| 67 | GO:0006790: sulfur compound metabolic process | 2.53E-03 |
| 68 | GO:0046854: phosphatidylinositol phosphorylation | 3.23E-03 |
| 69 | GO:0019853: L-ascorbic acid biosynthetic process | 3.23E-03 |
| 70 | GO:0009409: response to cold | 3.31E-03 |
| 71 | GO:0009116: nucleoside metabolic process | 3.73E-03 |
| 72 | GO:0009790: embryo development | 3.79E-03 |
| 73 | GO:0006418: tRNA aminoacylation for protein translation | 3.99E-03 |
| 74 | GO:0016998: cell wall macromolecule catabolic process | 4.26E-03 |
| 75 | GO:0019915: lipid storage | 4.26E-03 |
| 76 | GO:0040008: regulation of growth | 4.28E-03 |
| 77 | GO:0009411: response to UV | 4.81E-03 |
| 78 | GO:0008033: tRNA processing | 5.68E-03 |
| 79 | GO:0006457: protein folding | 5.71E-03 |
| 80 | GO:0010197: polar nucleus fusion | 5.98E-03 |
| 81 | GO:0009741: response to brassinosteroid | 5.98E-03 |
| 82 | GO:0080167: response to karrikin | 8.57E-03 |
| 83 | GO:0009627: systemic acquired resistance | 9.65E-03 |
| 84 | GO:0045454: cell redox homeostasis | 1.03E-02 |
| 85 | GO:0008219: cell death | 1.08E-02 |
| 86 | GO:0048481: plant ovule development | 1.08E-02 |
| 87 | GO:0009407: toxin catabolic process | 1.15E-02 |
| 88 | GO:0048527: lateral root development | 1.19E-02 |
| 89 | GO:0006839: mitochondrial transport | 1.39E-02 |
| 90 | GO:0042542: response to hydrogen peroxide | 1.48E-02 |
| 91 | GO:0051707: response to other organism | 1.52E-02 |
| 92 | GO:0009636: response to toxic substance | 1.65E-02 |
| 93 | GO:0006812: cation transport | 1.79E-02 |
| 94 | GO:0009585: red, far-red light phototransduction | 1.88E-02 |
| 95 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.93E-02 |
| 96 | GO:0009735: response to cytokinin | 2.06E-02 |
| 97 | GO:0009793: embryo development ending in seed dormancy | 2.90E-02 |
| 98 | GO:0042744: hydrogen peroxide catabolic process | 3.11E-02 |
| 99 | GO:0016036: cellular response to phosphate starvation | 3.39E-02 |
| 100 | GO:0008380: RNA splicing | 4.04E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 2 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 3 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 4 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 5 | GO:0019843: rRNA binding | 2.48E-15 |
| 6 | GO:0016851: magnesium chelatase activity | 2.38E-06 |
| 7 | GO:0003735: structural constituent of ribosome | 6.16E-06 |
| 8 | GO:0004832: valine-tRNA ligase activity | 6.74E-05 |
| 9 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 6.74E-05 |
| 10 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 6.74E-05 |
| 11 | GO:0042834: peptidoglycan binding | 6.74E-05 |
| 12 | GO:0004828: serine-tRNA ligase activity | 6.74E-05 |
| 13 | GO:0004853: uroporphyrinogen decarboxylase activity | 6.74E-05 |
| 14 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.62E-04 |
| 15 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.62E-04 |
| 16 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.62E-04 |
| 17 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 1.62E-04 |
| 18 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.62E-04 |
| 19 | GO:0004817: cysteine-tRNA ligase activity | 1.62E-04 |
| 20 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.62E-04 |
| 21 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.62E-04 |
| 22 | GO:0070402: NADPH binding | 2.75E-04 |
| 23 | GO:0016149: translation release factor activity, codon specific | 3.98E-04 |
| 24 | GO:0004550: nucleoside diphosphate kinase activity | 3.98E-04 |
| 25 | GO:0008097: 5S rRNA binding | 3.98E-04 |
| 26 | GO:0035250: UDP-galactosyltransferase activity | 3.98E-04 |
| 27 | GO:0016279: protein-lysine N-methyltransferase activity | 5.32E-04 |
| 28 | GO:0004845: uracil phosphoribosyltransferase activity | 5.32E-04 |
| 29 | GO:0004040: amidase activity | 6.73E-04 |
| 30 | GO:0016208: AMP binding | 8.23E-04 |
| 31 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 9.79E-04 |
| 32 | GO:0004849: uridine kinase activity | 9.79E-04 |
| 33 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.49E-03 |
| 34 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.60E-03 |
| 35 | GO:0003747: translation release factor activity | 1.69E-03 |
| 36 | GO:0008047: enzyme activator activity | 2.10E-03 |
| 37 | GO:0009055: electron carrier activity | 2.18E-03 |
| 38 | GO:0044183: protein binding involved in protein folding | 2.31E-03 |
| 39 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.99E-03 |
| 40 | GO:0008266: poly(U) RNA binding | 2.99E-03 |
| 41 | GO:0003729: mRNA binding | 3.82E-03 |
| 42 | GO:0008565: protein transporter activity | 3.89E-03 |
| 43 | GO:0003723: RNA binding | 4.70E-03 |
| 44 | GO:0003727: single-stranded RNA binding | 5.09E-03 |
| 45 | GO:0004812: aminoacyl-tRNA ligase activity | 5.38E-03 |
| 46 | GO:0004791: thioredoxin-disulfide reductase activity | 6.28E-03 |
| 47 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 7.57E-03 |
| 48 | GO:0016597: amino acid binding | 8.59E-03 |
| 49 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.08E-02 |
| 50 | GO:0003746: translation elongation factor activity | 1.27E-02 |
| 51 | GO:0004364: glutathione transferase activity | 1.48E-02 |
| 52 | GO:0004185: serine-type carboxypeptidase activity | 1.52E-02 |
| 53 | GO:0043621: protein self-association | 1.61E-02 |
| 54 | GO:0051287: NAD binding | 1.74E-02 |
| 55 | GO:0003690: double-stranded DNA binding | 1.93E-02 |
| 56 | GO:0051082: unfolded protein binding | 2.42E-02 |
| 57 | GO:0015035: protein disulfide oxidoreductase activity | 2.47E-02 |
| 58 | GO:0015297: antiporter activity | 3.45E-02 |
| 59 | GO:0005525: GTP binding | 3.71E-02 |
| 60 | GO:0008194: UDP-glycosyltransferase activity | 3.86E-02 |
| 61 | GO:0008168: methyltransferase activity | 4.73E-02 |
| 62 | GO:0000287: magnesium ion binding | 4.80E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.76E-37 |
| 2 | GO:0009570: chloroplast stroma | 4.08E-22 |
| 3 | GO:0009941: chloroplast envelope | 8.68E-17 |
| 4 | GO:0005840: ribosome | 1.98E-09 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 9.13E-07 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 9.74E-07 |
| 7 | GO:0009579: thylakoid | 1.12E-06 |
| 8 | GO:0009534: chloroplast thylakoid | 1.64E-05 |
| 9 | GO:0009547: plastid ribosome | 6.74E-05 |
| 10 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 6.74E-05 |
| 11 | GO:0000311: plastid large ribosomal subunit | 9.94E-05 |
| 12 | GO:0000427: plastid-encoded plastid RNA polymerase complex | 1.62E-04 |
| 13 | GO:0009706: chloroplast inner membrane | 2.70E-04 |
| 14 | GO:0010007: magnesium chelatase complex | 2.75E-04 |
| 15 | GO:0033281: TAT protein transport complex | 2.75E-04 |
| 16 | GO:0009536: plastid | 6.01E-04 |
| 17 | GO:0009539: photosystem II reaction center | 1.50E-03 |
| 18 | GO:0005763: mitochondrial small ribosomal subunit | 1.69E-03 |
| 19 | GO:0032040: small-subunit processome | 2.53E-03 |
| 20 | GO:0009508: plastid chromosome | 2.76E-03 |
| 21 | GO:0000312: plastid small ribosomal subunit | 2.99E-03 |
| 22 | GO:0005623: cell | 3.34E-03 |
| 23 | GO:0022626: cytosolic ribosome | 3.89E-03 |
| 24 | GO:0009654: photosystem II oxygen evolving complex | 3.99E-03 |
| 25 | GO:0042651: thylakoid membrane | 3.99E-03 |
| 26 | GO:0005778: peroxisomal membrane | 8.24E-03 |
| 27 | GO:0010319: stromule | 8.24E-03 |
| 28 | GO:0009295: nucleoid | 8.24E-03 |
| 29 | GO:0005622: intracellular | 8.53E-03 |
| 30 | GO:0031969: chloroplast membrane | 8.57E-03 |
| 31 | GO:0015934: large ribosomal subunit | 1.19E-02 |
| 32 | GO:0031977: thylakoid lumen | 1.44E-02 |
| 33 | GO:0005759: mitochondrial matrix | 3.33E-02 |
| 34 | GO:0046658: anchored component of plasma membrane | 4.35E-02 |
| 35 | GO:0022627: cytosolic small ribosomal subunit | 4.35E-02 |