GO Enrichment Analysis of Co-expressed Genes with
AT5G18500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 2 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 3 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 4 | GO:0006824: cobalt ion transport | 1.62E-04 |
| 5 | GO:0000476: maturation of 4.5S rRNA | 1.62E-04 |
| 6 | GO:0000967: rRNA 5'-end processing | 1.62E-04 |
| 7 | GO:0070509: calcium ion import | 1.62E-04 |
| 8 | GO:0007263: nitric oxide mediated signal transduction | 1.62E-04 |
| 9 | GO:0043266: regulation of potassium ion transport | 1.62E-04 |
| 10 | GO:0010480: microsporocyte differentiation | 1.62E-04 |
| 11 | GO:0000481: maturation of 5S rRNA | 1.62E-04 |
| 12 | GO:2000021: regulation of ion homeostasis | 1.62E-04 |
| 13 | GO:0034628: 'de novo' NAD biosynthetic process from aspartate | 1.62E-04 |
| 14 | GO:0034337: RNA folding | 1.62E-04 |
| 15 | GO:0010206: photosystem II repair | 1.84E-04 |
| 16 | GO:0010289: homogalacturonan biosynthetic process | 3.69E-04 |
| 17 | GO:0034470: ncRNA processing | 3.69E-04 |
| 18 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.69E-04 |
| 19 | GO:0034755: iron ion transmembrane transport | 3.69E-04 |
| 20 | GO:1900871: chloroplast mRNA modification | 3.69E-04 |
| 21 | GO:0045717: negative regulation of fatty acid biosynthetic process | 3.69E-04 |
| 22 | GO:0009767: photosynthetic electron transport chain | 3.96E-04 |
| 23 | GO:0006518: peptide metabolic process | 6.04E-04 |
| 24 | GO:0051176: positive regulation of sulfur metabolic process | 6.04E-04 |
| 25 | GO:2001295: malonyl-CoA biosynthetic process | 6.04E-04 |
| 26 | GO:0016226: iron-sulfur cluster assembly | 8.11E-04 |
| 27 | GO:0051639: actin filament network formation | 8.63E-04 |
| 28 | GO:0034059: response to anoxia | 8.63E-04 |
| 29 | GO:0055070: copper ion homeostasis | 8.63E-04 |
| 30 | GO:2001141: regulation of RNA biosynthetic process | 8.63E-04 |
| 31 | GO:0000413: protein peptidyl-prolyl isomerization | 1.11E-03 |
| 32 | GO:0051764: actin crosslink formation | 1.14E-03 |
| 33 | GO:0015994: chlorophyll metabolic process | 1.14E-03 |
| 34 | GO:0009435: NAD biosynthetic process | 1.45E-03 |
| 35 | GO:0006564: L-serine biosynthetic process | 1.45E-03 |
| 36 | GO:0035434: copper ion transmembrane transport | 1.45E-03 |
| 37 | GO:0010256: endomembrane system organization | 1.78E-03 |
| 38 | GO:0016554: cytidine to uridine editing | 1.78E-03 |
| 39 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.78E-03 |
| 40 | GO:0010190: cytochrome b6f complex assembly | 1.78E-03 |
| 41 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.78E-03 |
| 42 | GO:0010405: arabinogalactan protein metabolic process | 1.78E-03 |
| 43 | GO:0006751: glutathione catabolic process | 1.78E-03 |
| 44 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2.14E-03 |
| 45 | GO:0048280: vesicle fusion with Golgi apparatus | 2.14E-03 |
| 46 | GO:0006633: fatty acid biosynthetic process | 2.15E-03 |
| 47 | GO:0015995: chlorophyll biosynthetic process | 2.47E-03 |
| 48 | GO:0048437: floral organ development | 2.52E-03 |
| 49 | GO:0010196: nonphotochemical quenching | 2.52E-03 |
| 50 | GO:0051510: regulation of unidimensional cell growth | 2.52E-03 |
| 51 | GO:0032508: DNA duplex unwinding | 2.91E-03 |
| 52 | GO:0071482: cellular response to light stimulus | 3.33E-03 |
| 53 | GO:0032544: plastid translation | 3.33E-03 |
| 54 | GO:0017004: cytochrome complex assembly | 3.33E-03 |
| 55 | GO:0009060: aerobic respiration | 3.77E-03 |
| 56 | GO:0030001: metal ion transport | 3.93E-03 |
| 57 | GO:0009658: chloroplast organization | 4.21E-03 |
| 58 | GO:0010205: photoinhibition | 4.22E-03 |
| 59 | GO:1900865: chloroplast RNA modification | 4.22E-03 |
| 60 | GO:0006896: Golgi to vacuole transport | 4.69E-03 |
| 61 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 4.69E-03 |
| 62 | GO:0009773: photosynthetic electron transport in photosystem I | 5.19E-03 |
| 63 | GO:0009807: lignan biosynthetic process | 5.19E-03 |
| 64 | GO:0009073: aromatic amino acid family biosynthetic process | 5.19E-03 |
| 65 | GO:0006352: DNA-templated transcription, initiation | 5.19E-03 |
| 66 | GO:0048229: gametophyte development | 5.19E-03 |
| 67 | GO:0030048: actin filament-based movement | 6.22E-03 |
| 68 | GO:0009718: anthocyanin-containing compound biosynthetic process | 6.22E-03 |
| 69 | GO:0010075: regulation of meristem growth | 6.22E-03 |
| 70 | GO:0010207: photosystem II assembly | 6.76E-03 |
| 71 | GO:0009934: regulation of meristem structural organization | 6.76E-03 |
| 72 | GO:0006096: glycolytic process | 7.08E-03 |
| 73 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.90E-03 |
| 74 | GO:0051017: actin filament bundle assembly | 8.48E-03 |
| 75 | GO:0016575: histone deacetylation | 9.09E-03 |
| 76 | GO:0007017: microtubule-based process | 9.09E-03 |
| 77 | GO:0008152: metabolic process | 1.03E-02 |
| 78 | GO:0042147: retrograde transport, endosome to Golgi | 1.24E-02 |
| 79 | GO:0048653: anther development | 1.31E-02 |
| 80 | GO:0042391: regulation of membrane potential | 1.31E-02 |
| 81 | GO:0009741: response to brassinosteroid | 1.38E-02 |
| 82 | GO:0009793: embryo development ending in seed dormancy | 1.49E-02 |
| 83 | GO:0006623: protein targeting to vacuole | 1.52E-02 |
| 84 | GO:0009791: post-embryonic development | 1.52E-02 |
| 85 | GO:0006891: intra-Golgi vesicle-mediated transport | 1.60E-02 |
| 86 | GO:0010583: response to cyclopentenone | 1.67E-02 |
| 87 | GO:0030163: protein catabolic process | 1.75E-02 |
| 88 | GO:0009409: response to cold | 2.03E-02 |
| 89 | GO:0010027: thylakoid membrane organization | 2.07E-02 |
| 90 | GO:0042128: nitrate assimilation | 2.24E-02 |
| 91 | GO:0006888: ER to Golgi vesicle-mediated transport | 2.33E-02 |
| 92 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.94E-02 |
| 93 | GO:0016051: carbohydrate biosynthetic process | 2.97E-02 |
| 94 | GO:0009637: response to blue light | 2.97E-02 |
| 95 | GO:0015979: photosynthesis | 3.24E-02 |
| 96 | GO:0010114: response to red light | 3.55E-02 |
| 97 | GO:0006855: drug transmembrane transport | 3.97E-02 |
| 98 | GO:0032259: methylation | 4.01E-02 |
| 99 | GO:0042538: hyperosmotic salinity response | 4.18E-02 |
| 100 | GO:0006364: rRNA processing | 4.39E-02 |
| 101 | GO:0006486: protein glycosylation | 4.39E-02 |
| 102 | GO:0006857: oligopeptide transport | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005222: intracellular cAMP activated cation channel activity | 0.00E+00 |
| 2 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 3 | GO:0008987: quinolinate synthetase A activity | 0.00E+00 |
| 4 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 5 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 6 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 7 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.30E-06 |
| 8 | GO:0005528: FK506 binding | 2.87E-05 |
| 9 | GO:0045485: omega-6 fatty acid desaturase activity | 1.62E-04 |
| 10 | GO:0004328: formamidase activity | 1.62E-04 |
| 11 | GO:0005221: intracellular cyclic nucleotide activated cation channel activity | 1.62E-04 |
| 12 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 3.69E-04 |
| 13 | GO:0010283: pinoresinol reductase activity | 3.69E-04 |
| 14 | GO:0047746: chlorophyllase activity | 3.69E-04 |
| 15 | GO:0016868: intramolecular transferase activity, phosphotransferases | 3.69E-04 |
| 16 | GO:0003839: gamma-glutamylcyclotransferase activity | 3.69E-04 |
| 17 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.69E-04 |
| 18 | GO:0016531: copper chaperone activity | 6.04E-04 |
| 19 | GO:0019829: cation-transporting ATPase activity | 6.04E-04 |
| 20 | GO:0004148: dihydrolipoyl dehydrogenase activity | 6.04E-04 |
| 21 | GO:0004075: biotin carboxylase activity | 6.04E-04 |
| 22 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 8.63E-04 |
| 23 | GO:0016851: magnesium chelatase activity | 8.63E-04 |
| 24 | GO:0048487: beta-tubulin binding | 8.63E-04 |
| 25 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 8.63E-04 |
| 26 | GO:0016836: hydro-lyase activity | 1.14E-03 |
| 27 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.14E-03 |
| 28 | GO:0016987: sigma factor activity | 1.14E-03 |
| 29 | GO:0001053: plastid sigma factor activity | 1.14E-03 |
| 30 | GO:0003989: acetyl-CoA carboxylase activity | 1.45E-03 |
| 31 | GO:0019843: rRNA binding | 1.61E-03 |
| 32 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.78E-03 |
| 33 | GO:0004252: serine-type endopeptidase activity | 1.84E-03 |
| 34 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.14E-03 |
| 35 | GO:0005261: cation channel activity | 2.14E-03 |
| 36 | GO:0005242: inward rectifier potassium channel activity | 2.14E-03 |
| 37 | GO:0008236: serine-type peptidase activity | 2.60E-03 |
| 38 | GO:0004033: aldo-keto reductase (NADP) activity | 2.91E-03 |
| 39 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 3.33E-03 |
| 40 | GO:0005375: copper ion transmembrane transporter activity | 3.33E-03 |
| 41 | GO:0005381: iron ion transmembrane transporter activity | 4.22E-03 |
| 42 | GO:0008047: enzyme activator activity | 4.69E-03 |
| 43 | GO:0008378: galactosyltransferase activity | 5.69E-03 |
| 44 | GO:0004565: beta-galactosidase activity | 6.22E-03 |
| 45 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 6.22E-03 |
| 46 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.22E-03 |
| 47 | GO:0005262: calcium channel activity | 6.22E-03 |
| 48 | GO:0003774: motor activity | 6.76E-03 |
| 49 | GO:0030553: cGMP binding | 7.32E-03 |
| 50 | GO:0030552: cAMP binding | 7.32E-03 |
| 51 | GO:0004407: histone deacetylase activity | 8.48E-03 |
| 52 | GO:0051536: iron-sulfur cluster binding | 8.48E-03 |
| 53 | GO:0043424: protein histidine kinase binding | 9.09E-03 |
| 54 | GO:0005216: ion channel activity | 9.09E-03 |
| 55 | GO:0033612: receptor serine/threonine kinase binding | 9.72E-03 |
| 56 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.04E-02 |
| 57 | GO:0016758: transferase activity, transferring hexosyl groups | 1.04E-02 |
| 58 | GO:0030570: pectate lyase activity | 1.10E-02 |
| 59 | GO:0016787: hydrolase activity | 1.31E-02 |
| 60 | GO:0030551: cyclic nucleotide binding | 1.31E-02 |
| 61 | GO:0003743: translation initiation factor activity | 1.73E-02 |
| 62 | GO:0051015: actin filament binding | 1.75E-02 |
| 63 | GO:0005200: structural constituent of cytoskeleton | 1.91E-02 |
| 64 | GO:0016597: amino acid binding | 1.99E-02 |
| 65 | GO:0008168: methyltransferase activity | 2.21E-02 |
| 66 | GO:0043531: ADP binding | 2.51E-02 |
| 67 | GO:0015238: drug transmembrane transporter activity | 2.60E-02 |
| 68 | GO:0005096: GTPase activator activity | 2.60E-02 |
| 69 | GO:0004222: metalloendopeptidase activity | 2.69E-02 |
| 70 | GO:0000149: SNARE binding | 3.16E-02 |
| 71 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.26E-02 |
| 72 | GO:0005484: SNAP receptor activity | 3.55E-02 |
| 73 | GO:0043621: protein self-association | 3.76E-02 |
| 74 | GO:0015293: symporter activity | 3.86E-02 |
| 75 | GO:0051287: NAD binding | 4.07E-02 |
| 76 | GO:0005509: calcium ion binding | 4.09E-02 |
| 77 | GO:0003924: GTPase activity | 4.18E-02 |
| 78 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.39E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.54E-25 |
| 2 | GO:0009570: chloroplast stroma | 1.05E-15 |
| 3 | GO:0009543: chloroplast thylakoid lumen | 1.24E-12 |
| 4 | GO:0009534: chloroplast thylakoid | 1.22E-11 |
| 5 | GO:0031977: thylakoid lumen | 2.72E-11 |
| 6 | GO:0009941: chloroplast envelope | 6.88E-11 |
| 7 | GO:0009579: thylakoid | 5.92E-07 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 2.55E-06 |
| 9 | GO:0009533: chloroplast stromal thylakoid | 9.33E-05 |
| 10 | GO:0009344: nitrite reductase complex [NAD(P)H] | 1.62E-04 |
| 11 | GO:0010007: magnesium chelatase complex | 6.04E-04 |
| 12 | GO:0009654: photosystem II oxygen evolving complex | 6.78E-04 |
| 13 | GO:0032432: actin filament bundle | 8.63E-04 |
| 14 | GO:0019898: extrinsic component of membrane | 1.37E-03 |
| 15 | GO:0010287: plastoglobule | 1.50E-03 |
| 16 | GO:0012507: ER to Golgi transport vesicle membrane | 2.91E-03 |
| 17 | GO:0045298: tubulin complex | 3.77E-03 |
| 18 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.77E-03 |
| 19 | GO:0016459: myosin complex | 4.69E-03 |
| 20 | GO:0005884: actin filament | 5.19E-03 |
| 21 | GO:0032040: small-subunit processome | 5.69E-03 |
| 22 | GO:0030095: chloroplast photosystem II | 6.76E-03 |
| 23 | GO:0000312: plastid small ribosomal subunit | 6.76E-03 |
| 24 | GO:0042651: thylakoid membrane | 9.09E-03 |
| 25 | GO:0005794: Golgi apparatus | 9.98E-03 |
| 26 | GO:0009705: plant-type vacuole membrane | 1.48E-02 |
| 27 | GO:0000139: Golgi membrane | 2.03E-02 |
| 28 | GO:0015934: large ribosomal subunit | 2.78E-02 |
| 29 | GO:0031201: SNARE complex | 3.35E-02 |
| 30 | GO:0031902: late endosome membrane | 3.35E-02 |
| 31 | GO:0005768: endosome | 3.97E-02 |
| 32 | GO:0016021: integral component of membrane | 4.03E-02 |
| 33 | GO:0005840: ribosome | 4.78E-02 |