GO Enrichment Analysis of Co-expressed Genes with
AT5G17310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 3 | GO:0006412: translation | 3.91E-09 |
| 4 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 4.47E-07 |
| 5 | GO:0032544: plastid translation | 6.27E-05 |
| 6 | GO:1902458: positive regulation of stomatal opening | 9.14E-05 |
| 7 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 9.14E-05 |
| 8 | GO:0042371: vitamin K biosynthetic process | 9.14E-05 |
| 9 | GO:0019253: reductive pentose-phosphate cycle | 2.02E-04 |
| 10 | GO:0010207: photosystem II assembly | 2.02E-04 |
| 11 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.16E-04 |
| 12 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.16E-04 |
| 13 | GO:0034755: iron ion transmembrane transport | 2.16E-04 |
| 14 | GO:1904143: positive regulation of carotenoid biosynthetic process | 2.16E-04 |
| 15 | GO:0009658: chloroplast organization | 2.16E-04 |
| 16 | GO:0090351: seedling development | 2.28E-04 |
| 17 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.56E-04 |
| 18 | GO:0010581: regulation of starch biosynthetic process | 3.61E-04 |
| 19 | GO:0006954: inflammatory response | 3.61E-04 |
| 20 | GO:0006518: peptide metabolic process | 3.61E-04 |
| 21 | GO:0006730: one-carbon metabolic process | 3.80E-04 |
| 22 | GO:0009306: protein secretion | 4.50E-04 |
| 23 | GO:1902476: chloride transmembrane transport | 5.20E-04 |
| 24 | GO:0009800: cinnamic acid biosynthetic process | 5.20E-04 |
| 25 | GO:0071483: cellular response to blue light | 6.90E-04 |
| 26 | GO:0009790: embryo development | 7.36E-04 |
| 27 | GO:0032502: developmental process | 7.39E-04 |
| 28 | GO:0009247: glycolipid biosynthetic process | 8.73E-04 |
| 29 | GO:0006564: L-serine biosynthetic process | 8.73E-04 |
| 30 | GO:0045038: protein import into chloroplast thylakoid membrane | 8.73E-04 |
| 31 | GO:0010027: thylakoid membrane organization | 9.86E-04 |
| 32 | GO:0042549: photosystem II stabilization | 1.07E-03 |
| 33 | GO:0006559: L-phenylalanine catabolic process | 1.07E-03 |
| 34 | GO:0032973: amino acid export | 1.07E-03 |
| 35 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.07E-03 |
| 36 | GO:0006354: DNA-templated transcription, elongation | 1.07E-03 |
| 37 | GO:1901259: chloroplast rRNA processing | 1.27E-03 |
| 38 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.27E-03 |
| 39 | GO:0009409: response to cold | 1.46E-03 |
| 40 | GO:0009610: response to symbiotic fungus | 1.49E-03 |
| 41 | GO:0043090: amino acid import | 1.49E-03 |
| 42 | GO:0050829: defense response to Gram-negative bacterium | 1.49E-03 |
| 43 | GO:0006821: chloride transport | 1.49E-03 |
| 44 | GO:0042254: ribosome biogenesis | 1.59E-03 |
| 45 | GO:0042255: ribosome assembly | 1.72E-03 |
| 46 | GO:0006605: protein targeting | 1.72E-03 |
| 47 | GO:0019375: galactolipid biosynthetic process | 1.72E-03 |
| 48 | GO:2000070: regulation of response to water deprivation | 1.72E-03 |
| 49 | GO:0009699: phenylpropanoid biosynthetic process | 1.96E-03 |
| 50 | GO:0071482: cellular response to light stimulus | 1.96E-03 |
| 51 | GO:0009657: plastid organization | 1.96E-03 |
| 52 | GO:0019430: removal of superoxide radicals | 1.96E-03 |
| 53 | GO:0009821: alkaloid biosynthetic process | 2.21E-03 |
| 54 | GO:0010206: photosystem II repair | 2.21E-03 |
| 55 | GO:0080144: amino acid homeostasis | 2.21E-03 |
| 56 | GO:0006783: heme biosynthetic process | 2.21E-03 |
| 57 | GO:0010205: photoinhibition | 2.48E-03 |
| 58 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.48E-03 |
| 59 | GO:0010380: regulation of chlorophyll biosynthetic process | 2.48E-03 |
| 60 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.75E-03 |
| 61 | GO:0019684: photosynthesis, light reaction | 3.03E-03 |
| 62 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.03E-03 |
| 63 | GO:0043085: positive regulation of catalytic activity | 3.03E-03 |
| 64 | GO:0006879: cellular iron ion homeostasis | 3.03E-03 |
| 65 | GO:0006352: DNA-templated transcription, initiation | 3.03E-03 |
| 66 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.03E-03 |
| 67 | GO:0006096: glycolytic process | 3.24E-03 |
| 68 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.32E-03 |
| 69 | GO:0045037: protein import into chloroplast stroma | 3.32E-03 |
| 70 | GO:0015706: nitrate transport | 3.32E-03 |
| 71 | GO:0006006: glucose metabolic process | 3.63E-03 |
| 72 | GO:0010020: chloroplast fission | 3.93E-03 |
| 73 | GO:0010167: response to nitrate | 4.26E-03 |
| 74 | GO:0009058: biosynthetic process | 5.12E-03 |
| 75 | GO:0031408: oxylipin biosynthetic process | 5.62E-03 |
| 76 | GO:0030433: ubiquitin-dependent ERAD pathway | 5.98E-03 |
| 77 | GO:0006817: phosphate ion transport | 6.73E-03 |
| 78 | GO:0000413: protein peptidyl-prolyl isomerization | 7.51E-03 |
| 79 | GO:0009741: response to brassinosteroid | 7.91E-03 |
| 80 | GO:0009646: response to absence of light | 8.32E-03 |
| 81 | GO:0080167: response to karrikin | 1.29E-02 |
| 82 | GO:0015995: chlorophyll biosynthetic process | 1.33E-02 |
| 83 | GO:0009793: embryo development ending in seed dormancy | 1.38E-02 |
| 84 | GO:0015979: photosynthesis | 1.47E-02 |
| 85 | GO:0009853: photorespiration | 1.69E-02 |
| 86 | GO:0006839: mitochondrial transport | 1.86E-02 |
| 87 | GO:0009744: response to sucrose | 2.03E-02 |
| 88 | GO:0051707: response to other organism | 2.03E-02 |
| 89 | GO:0010114: response to red light | 2.03E-02 |
| 90 | GO:0000209: protein polyubiquitination | 2.09E-02 |
| 91 | GO:0006417: regulation of translation | 2.70E-02 |
| 92 | GO:0055114: oxidation-reduction process | 2.70E-02 |
| 93 | GO:0009735: response to cytokinin | 3.09E-02 |
| 94 | GO:0042545: cell wall modification | 3.16E-02 |
| 95 | GO:0006396: RNA processing | 3.29E-02 |
| 96 | GO:0009742: brassinosteroid mediated signaling pathway | 3.36E-02 |
| 97 | GO:0009416: response to light stimulus | 3.38E-02 |
| 98 | GO:0009611: response to wounding | 3.46E-02 |
| 99 | GO:0042744: hydrogen peroxide catabolic process | 4.15E-02 |
| 100 | GO:0006457: protein folding | 4.36E-02 |
| 101 | GO:0045490: pectin catabolic process | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 2 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 4 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 5 | GO:0019843: rRNA binding | 3.30E-16 |
| 6 | GO:0003735: structural constituent of ribosome | 1.30E-10 |
| 7 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 4.47E-07 |
| 8 | GO:0004655: porphobilinogen synthase activity | 9.14E-05 |
| 9 | GO:0009671: nitrate:proton symporter activity | 9.14E-05 |
| 10 | GO:0004618: phosphoglycerate kinase activity | 2.16E-04 |
| 11 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 2.16E-04 |
| 12 | GO:0004617: phosphoglycerate dehydrogenase activity | 2.16E-04 |
| 13 | GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity | 2.16E-04 |
| 14 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 2.16E-04 |
| 15 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.16E-04 |
| 16 | GO:0045548: phenylalanine ammonia-lyase activity | 3.61E-04 |
| 17 | GO:0003727: single-stranded RNA binding | 4.50E-04 |
| 18 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 5.20E-04 |
| 19 | GO:0035250: UDP-galactosyltransferase activity | 5.20E-04 |
| 20 | GO:0001053: plastid sigma factor activity | 6.90E-04 |
| 21 | GO:0016987: sigma factor activity | 6.90E-04 |
| 22 | GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity | 6.90E-04 |
| 23 | GO:0005253: anion channel activity | 6.90E-04 |
| 24 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 6.90E-04 |
| 25 | GO:0008374: O-acyltransferase activity | 8.73E-04 |
| 26 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 8.73E-04 |
| 27 | GO:0005247: voltage-gated chloride channel activity | 1.07E-03 |
| 28 | GO:0004222: metalloendopeptidase activity | 1.40E-03 |
| 29 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.96E-03 |
| 30 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.38E-03 |
| 31 | GO:0051287: NAD binding | 2.47E-03 |
| 32 | GO:0015112: nitrate transmembrane transporter activity | 2.48E-03 |
| 33 | GO:0005381: iron ion transmembrane transporter activity | 2.48E-03 |
| 34 | GO:0016844: strictosidine synthase activity | 2.48E-03 |
| 35 | GO:0008047: enzyme activator activity | 2.75E-03 |
| 36 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.75E-03 |
| 37 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.63E-03 |
| 38 | GO:0008266: poly(U) RNA binding | 3.93E-03 |
| 39 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 3.93E-03 |
| 40 | GO:0008146: sulfotransferase activity | 4.26E-03 |
| 41 | GO:0004791: thioredoxin-disulfide reductase activity | 8.32E-03 |
| 42 | GO:0010181: FMN binding | 8.32E-03 |
| 43 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.00E-02 |
| 44 | GO:0016597: amino acid binding | 1.14E-02 |
| 45 | GO:0008236: serine-type peptidase activity | 1.38E-02 |
| 46 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.43E-02 |
| 47 | GO:0050661: NADP binding | 1.86E-02 |
| 48 | GO:0043621: protein self-association | 2.14E-02 |
| 49 | GO:0015293: symporter activity | 2.20E-02 |
| 50 | GO:0016491: oxidoreductase activity | 2.39E-02 |
| 51 | GO:0003690: double-stranded DNA binding | 2.57E-02 |
| 52 | GO:0015171: amino acid transmembrane transporter activity | 2.70E-02 |
| 53 | GO:0031625: ubiquitin protein ligase binding | 2.70E-02 |
| 54 | GO:0045330: aspartyl esterase activity | 2.70E-02 |
| 55 | GO:0016874: ligase activity | 3.09E-02 |
| 56 | GO:0030599: pectinesterase activity | 3.09E-02 |
| 57 | GO:0016746: transferase activity, transferring acyl groups | 3.29E-02 |
| 58 | GO:0004252: serine-type endopeptidase activity | 4.07E-02 |
| 59 | GO:0008565: protein transporter activity | 4.30E-02 |
| 60 | GO:0016787: hydrolase activity | 4.36E-02 |
| 61 | GO:0046910: pectinesterase inhibitor activity | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 9.10E-31 |
| 4 | GO:0009570: chloroplast stroma | 9.15E-24 |
| 5 | GO:0009941: chloroplast envelope | 1.58E-17 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 2.67E-10 |
| 7 | GO:0000312: plastid small ribosomal subunit | 4.36E-08 |
| 8 | GO:0009295: nucleoid | 1.43E-06 |
| 9 | GO:0005840: ribosome | 2.76E-06 |
| 10 | GO:0000311: plastid large ribosomal subunit | 2.77E-06 |
| 11 | GO:0009579: thylakoid | 4.49E-06 |
| 12 | GO:0031969: chloroplast membrane | 3.12E-05 |
| 13 | GO:0009706: chloroplast inner membrane | 3.64E-05 |
| 14 | GO:0000428: DNA-directed RNA polymerase complex | 9.14E-05 |
| 15 | GO:0009547: plastid ribosome | 9.14E-05 |
| 16 | GO:0015934: large ribosomal subunit | 1.18E-04 |
| 17 | GO:0009536: plastid | 2.67E-04 |
| 18 | GO:0009534: chloroplast thylakoid | 3.43E-04 |
| 19 | GO:0033281: TAT protein transport complex | 3.61E-04 |
| 20 | GO:0042646: plastid nucleoid | 5.20E-04 |
| 21 | GO:0009543: chloroplast thylakoid lumen | 6.07E-04 |
| 22 | GO:0010319: stromule | 8.83E-04 |
| 23 | GO:0034707: chloride channel complex | 1.07E-03 |
| 24 | GO:0016363: nuclear matrix | 1.27E-03 |
| 25 | GO:0005762: mitochondrial large ribosomal subunit | 1.27E-03 |
| 26 | GO:0022627: cytosolic small ribosomal subunit | 1.28E-03 |
| 27 | GO:0031977: thylakoid lumen | 1.89E-03 |
| 28 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.21E-03 |
| 29 | GO:0005763: mitochondrial small ribosomal subunit | 2.21E-03 |
| 30 | GO:0009522: photosystem I | 8.32E-03 |
| 31 | GO:0016020: membrane | 9.21E-03 |
| 32 | GO:0071944: cell periphery | 1.00E-02 |
| 33 | GO:0022626: cytosolic ribosome | 3.24E-02 |
| 34 | GO:0005623: cell | 3.85E-02 |
| 35 | GO:0005759: mitochondrial matrix | 4.45E-02 |
| 36 | GO:0009705: plant-type vacuole membrane | 4.75E-02 |