co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G16050

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032780: negative regulation of ATPase activity	0.00E+00
2	GO:0006482: protein demethylation	0.00E+00
3	GO:0010111: glyoxysome organization	0.00E+00
4	GO:0048227: plasma membrane to endosome transport	0.00E+00
5	GO:0001881: receptor recycling	0.00E+00
6	GO:0043462: regulation of ATPase activity	0.00E+00
7	GO:0009991: response to extracellular stimulus	0.00E+00
8	GO:0006542: glutamine biosynthetic process	2.16E-05
9	GO:0051603: proteolysis involved in cellular protein catabolic process	9.36E-05
10	GO:0006605: protein targeting	1.25E-04
11	GO:0006464: cellular protein modification process	1.63E-04
12	GO:0019628: urate catabolic process	1.67E-04
13	GO:0000303: response to superoxide	1.67E-04
14	GO:0080173: male-female gamete recognition during double fertilization	1.67E-04
15	GO:0006481: C-terminal protein methylation	1.67E-04
16	GO:0035344: hypoxanthine transport	1.67E-04
17	GO:0010265: SCF complex assembly	1.67E-04
18	GO:0034214: protein hexamerization	1.67E-04
19	GO:0098721: uracil import across plasma membrane	1.67E-04
20	GO:0006144: purine nucleobase metabolic process	1.67E-04
21	GO:0010201: response to continuous far red light stimulus by the high-irradiance response system	1.67E-04
22	GO:0098702: adenine import across plasma membrane	1.67E-04
23	GO:0048455: stamen formation	1.67E-04
24	GO:0046167: glycerol-3-phosphate biosynthetic process	1.67E-04
25	GO:0098710: guanine import across plasma membrane	1.67E-04
26	GO:1905182: positive regulation of urease activity	3.78E-04
27	GO:0006641: triglyceride metabolic process	3.78E-04
28	GO:0019521: D-gluconate metabolic process	3.78E-04
29	GO:0019374: galactolipid metabolic process	3.78E-04
30	GO:0051788: response to misfolded protein	3.78E-04
31	GO:1902000: homogentisate catabolic process	3.78E-04
32	GO:0097054: L-glutamate biosynthetic process	3.78E-04
33	GO:0009156: ribonucleoside monophosphate biosynthetic process	3.78E-04
34	GO:0019395: fatty acid oxidation	3.78E-04
35	GO:0031648: protein destabilization	3.78E-04
36	GO:0071395: cellular response to jasmonic acid stimulus	3.78E-04
37	GO:0010608: posttranscriptional regulation of gene expression	3.78E-04
38	GO:0009867: jasmonic acid mediated signaling pathway	4.10E-04
39	GO:0006511: ubiquitin-dependent protein catabolic process	4.35E-04
40	GO:0007034: vacuolar transport	4.63E-04
41	GO:0006631: fatty acid metabolic process	5.11E-04
42	GO:0045039: protein import into mitochondrial inner membrane	6.19E-04
43	GO:0009072: aromatic amino acid family metabolic process	6.19E-04
44	GO:0048586: regulation of long-day photoperiodism, flowering	6.19E-04
45	GO:0019563: glycerol catabolic process	6.19E-04
46	GO:0010359: regulation of anion channel activity	6.19E-04
47	GO:0008333: endosome to lysosome transport	6.19E-04
48	GO:0043617: cellular response to sucrose starvation	6.19E-04
49	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	7.20E-04
50	GO:0030433: ubiquitin-dependent ERAD pathway	8.40E-04
51	GO:0031348: negative regulation of defense response	8.40E-04
52	GO:0006537: glutamate biosynthetic process	8.83E-04
53	GO:0006072: glycerol-3-phosphate metabolic process	8.83E-04
54	GO:0006809: nitric oxide biosynthetic process	8.83E-04
55	GO:0009399: nitrogen fixation	8.83E-04
56	GO:0006624: vacuolar protein processing	8.83E-04
57	GO:0009723: response to ethylene	9.83E-04
58	GO:0048366: leaf development	1.01E-03
59	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.07E-03
60	GO:0010363: regulation of plant-type hypersensitive response	1.17E-03
61	GO:0042991: transcription factor import into nucleus	1.17E-03
62	GO:0010188: response to microbial phytotoxin	1.17E-03
63	GO:0006878: cellular copper ion homeostasis	1.17E-03
64	GO:0009165: nucleotide biosynthetic process	1.17E-03
65	GO:0019676: ammonia assimilation cycle	1.17E-03
66	GO:0006623: protein targeting to vacuole	1.42E-03
67	GO:0030308: negative regulation of cell growth	1.48E-03
68	GO:0098719: sodium ion import across plasma membrane	1.48E-03
69	GO:0046283: anthocyanin-containing compound metabolic process	1.48E-03
70	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.52E-03
71	GO:0006635: fatty acid beta-oxidation	1.52E-03
72	GO:0015031: protein transport	1.55E-03
73	GO:0030163: protein catabolic process	1.72E-03
74	GO:0043248: proteasome assembly	1.83E-03
75	GO:0010358: leaf shaping	1.83E-03
76	GO:1902456: regulation of stomatal opening	1.83E-03
77	GO:0006914: autophagy	1.83E-03
78	GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	1.83E-03
79	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.83E-03
80	GO:0000911: cytokinesis by cell plate formation	2.19E-03
81	GO:0010189: vitamin E biosynthetic process	2.19E-03
82	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.30E-03
83	GO:0042128: nitrate assimilation	2.43E-03
84	GO:0006950: response to stress	2.56E-03
85	GO:0006955: immune response	2.58E-03
86	GO:0046470: phosphatidylcholine metabolic process	2.58E-03
87	GO:0048528: post-embryonic root development	2.58E-03
88	GO:0071446: cellular response to salicylic acid stimulus	2.58E-03
89	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	2.58E-03
90	GO:0009610: response to symbiotic fungus	2.58E-03
91	GO:0009873: ethylene-activated signaling pathway	2.89E-03
92	GO:0048767: root hair elongation	2.98E-03
93	GO:0006644: phospholipid metabolic process	2.99E-03
94	GO:0006102: isocitrate metabolic process	2.99E-03
95	GO:0010119: regulation of stomatal movement	3.27E-03
96	GO:0010043: response to zinc ion	3.27E-03
97	GO:0030968: endoplasmic reticulum unfolded protein response	3.41E-03
98	GO:0006098: pentose-phosphate shunt	3.86E-03
99	GO:0000373: Group II intron splicing	3.86E-03
100	GO:2000280: regulation of root development	4.33E-03
101	GO:0016571: histone methylation	4.33E-03
102	GO:0051453: regulation of intracellular pH	4.33E-03
103	GO:0009744: response to sucrose	4.61E-03
104	GO:0055114: oxidation-reduction process	4.65E-03
105	GO:0000209: protein polyubiquitination	4.80E-03
106	GO:0010629: negative regulation of gene expression	4.81E-03
107	GO:0019538: protein metabolic process	4.81E-03
108	GO:0072593: reactive oxygen species metabolic process	5.32E-03
109	GO:0043085: positive regulation of catalytic activity	5.32E-03
110	GO:0042538: hyperosmotic salinity response	5.79E-03
111	GO:0012501: programmed cell death	5.84E-03
112	GO:0009809: lignin biosynthetic process	6.21E-03
113	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	6.38E-03
114	GO:0010102: lateral root morphogenesis	6.38E-03
115	GO:0006807: nitrogen compound metabolic process	6.38E-03
116	GO:0055046: microgametogenesis	6.38E-03
117	GO:0002237: response to molecule of bacterial origin	6.93E-03
118	GO:0009887: animal organ morphogenesis	6.93E-03
119	GO:0007031: peroxisome organization	7.50E-03
120	GO:0009825: multidimensional cell growth	7.50E-03
121	GO:0046686: response to cadmium ion	8.02E-03
122	GO:0034976: response to endoplasmic reticulum stress	8.10E-03
123	GO:0009116: nucleoside metabolic process	8.70E-03
124	GO:0030150: protein import into mitochondrial matrix	8.70E-03
125	GO:2000377: regulation of reactive oxygen species metabolic process	8.70E-03
126	GO:0016042: lipid catabolic process	9.17E-03
127	GO:0016575: histone deacetylation	9.33E-03
128	GO:0009695: jasmonic acid biosynthetic process	9.33E-03
129	GO:0006629: lipid metabolic process	9.51E-03
130	GO:0031408: oxylipin biosynthetic process	9.97E-03
131	GO:0009651: response to salt stress	1.04E-02
132	GO:0009561: megagametogenesis	1.20E-02
133	GO:0009845: seed germination	1.20E-02
134	GO:0042147: retrograde transport, endosome to Golgi	1.27E-02
135	GO:0009790: embryo development	1.30E-02
136	GO:0010087: phloem or xylem histogenesis	1.34E-02
137	GO:0009737: response to abscisic acid	1.38E-02
138	GO:0006979: response to oxidative stress	1.38E-02
139	GO:0010154: fruit development	1.41E-02
140	GO:0010197: polar nucleus fusion	1.41E-02
141	GO:0040008: regulation of growth	1.46E-02
142	GO:0009646: response to absence of light	1.49E-02
143	GO:0006814: sodium ion transport	1.49E-02
144	GO:0042752: regulation of circadian rhythm	1.49E-02
145	GO:0010150: leaf senescence	1.53E-02
146	GO:0048825: cotyledon development	1.56E-02
147	GO:0010193: response to ozone	1.64E-02
148	GO:0007264: small GTPase mediated signal transduction	1.72E-02
149	GO:0010583: response to cyclopentenone	1.72E-02
150	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.72E-02
151	GO:0016032: viral process	1.72E-02
152	GO:0006470: protein dephosphorylation	1.75E-02
153	GO:1901657: glycosyl compound metabolic process	1.80E-02
154	GO:0010468: regulation of gene expression	1.83E-02
155	GO:0009617: response to bacterium	1.83E-02
156	GO:0009738: abscisic acid-activated signaling pathway	1.89E-02
157	GO:0071805: potassium ion transmembrane transport	1.96E-02
158	GO:0009611: response to wounding	2.02E-02
159	GO:0009911: positive regulation of flower development	2.13E-02
160	GO:0010029: regulation of seed germination	2.22E-02
161	GO:0009816: defense response to bacterium, incompatible interaction	2.22E-02
162	GO:0006974: cellular response to DNA damage stimulus	2.30E-02
163	GO:0048573: photoperiodism, flowering	2.39E-02
164	GO:0009817: defense response to fungus, incompatible interaction	2.57E-02
165	GO:0006508: proteolysis	2.57E-02
166	GO:0007049: cell cycle	2.65E-02
167	GO:0009407: toxin catabolic process	2.76E-02
168	GO:0009910: negative regulation of flower development	2.85E-02
169	GO:0048527: lateral root development	2.85E-02
170	GO:0007568: aging	2.85E-02
171	GO:0006099: tricarboxylic acid cycle	3.14E-02
172	GO:0046777: protein autophosphorylation	3.15E-02
173	GO:0042542: response to hydrogen peroxide	3.55E-02
174	GO:0045892: negative regulation of transcription, DNA-templated	3.58E-02
175	GO:0051707: response to other organism	3.65E-02
176	GO:0009846: pollen germination	4.29E-02
177	GO:0009408: response to heat	4.34E-02
178	GO:0009736: cytokinin-activated signaling pathway	4.51E-02
179	GO:0009753: response to jasmonic acid	4.65E-02
180	GO:0006417: regulation of translation	4.84E-02
181	GO:0006468: protein phosphorylation	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0050342: tocopherol O-methyltransferase activity	0.00E+00
2	GO:0004622: lysophospholipase activity	0.00E+00
3	GO:0033550: MAP kinase tyrosine phosphatase activity	0.00E+00
4	GO:0015930: glutamate synthase activity	0.00E+00
5	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
6	GO:0004370: glycerol kinase activity	0.00E+00
7	GO:0051723: protein methylesterase activity	0.00E+00
8	GO:0004846: urate oxidase activity	0.00E+00
9	GO:0003846: 2-acylglycerol O-acyltransferase activity	0.00E+00
10	GO:0042030: ATPase inhibitor activity	0.00E+00
11	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
12	GO:0004356: glutamate-ammonia ligase activity	3.50E-05
13	GO:0031593: polyubiquitin binding	5.21E-05
14	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	7.27E-05
15	GO:0004620: phospholipase activity	9.72E-05
16	GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity	1.67E-04
17	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.67E-04
18	GO:0015208: guanine transmembrane transporter activity	1.67E-04
19	GO:0015294: solute:cation symporter activity	1.67E-04
20	GO:0015207: adenine transmembrane transporter activity	1.67E-04
21	GO:0016041: glutamate synthase (ferredoxin) activity	1.67E-04
22	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.67E-04
23	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.67E-04
24	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	3.78E-04
25	GO:0016787: hydrolase activity	3.78E-04
26	GO:0019200: carbohydrate kinase activity	3.78E-04
27	GO:0004450: isocitrate dehydrogenase (NADP+) activity	3.78E-04
28	GO:0003988: acetyl-CoA C-acyltransferase activity	3.78E-04
29	GO:0004175: endopeptidase activity	4.63E-04
30	GO:0005515: protein binding	4.64E-04
31	GO:0005093: Rab GDP-dissociation inhibitor activity	6.19E-04
32	GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	6.19E-04
33	GO:0016151: nickel cation binding	6.19E-04
34	GO:0005047: signal recognition particle binding	6.19E-04
35	GO:0016805: dipeptidase activity	6.19E-04
36	GO:0004749: ribose phosphate diphosphokinase activity	8.83E-04
37	GO:0008276: protein methyltransferase activity	8.83E-04
38	GO:0001653: peptide receptor activity	8.83E-04
39	GO:0004416: hydroxyacylglutathione hydrolase activity	8.83E-04
40	GO:0004165: dodecenoyl-CoA delta-isomerase activity	8.83E-04
41	GO:0004300: enoyl-CoA hydratase activity	8.83E-04
42	GO:0015210: uracil transmembrane transporter activity	1.17E-03
43	GO:0003995: acyl-CoA dehydrogenase activity	1.17E-03
44	GO:0004301: epoxide hydrolase activity	1.17E-03
45	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	1.48E-03
46	GO:0005496: steroid binding	1.48E-03
47	GO:0031386: protein tag	1.48E-03
48	GO:0051538: 3 iron, 4 sulfur cluster binding	1.48E-03
49	GO:0004197: cysteine-type endopeptidase activity	1.62E-03
50	GO:0047714: galactolipase activity	1.83E-03
51	GO:0036402: proteasome-activating ATPase activity	1.83E-03
52	GO:0003924: GTPase activity	1.96E-03
53	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	2.19E-03
54	GO:0102391: decanoate--CoA ligase activity	2.19E-03
55	GO:0003950: NAD+ ADP-ribosyltransferase activity	2.19E-03
56	GO:0008235: metalloexopeptidase activity	2.58E-03
57	GO:0004467: long-chain fatty acid-CoA ligase activity	2.58E-03
58	GO:0005096: GTPase activator activity	2.98E-03
59	GO:0052747: sinapyl alcohol dehydrogenase activity	2.99E-03
60	GO:0004869: cysteine-type endopeptidase inhibitor activity	2.99E-03
61	GO:0004630: phospholipase D activity	3.41E-03
62	GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)	3.41E-03
63	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	3.41E-03
64	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	3.41E-03
65	GO:0016887: ATPase activity	3.82E-03
66	GO:0005524: ATP binding	4.23E-03
67	GO:0047617: acyl-CoA hydrolase activity	4.33E-03
68	GO:0004713: protein tyrosine kinase activity	4.81E-03
69	GO:0008171: O-methyltransferase activity	4.81E-03
70	GO:0015386: potassium:proton antiporter activity	5.32E-03
71	GO:0008794: arsenate reductase (glutaredoxin) activity	5.32E-03
72	GO:0004177: aminopeptidase activity	5.32E-03
73	GO:0045551: cinnamyl-alcohol dehydrogenase activity	5.84E-03
74	GO:0061630: ubiquitin protein ligase activity	6.18E-03
75	GO:0015266: protein channel activity	6.38E-03
76	GO:0031072: heat shock protein binding	6.38E-03
77	GO:0031624: ubiquitin conjugating enzyme binding	6.93E-03
78	GO:0017025: TBP-class protein binding	7.50E-03
79	GO:0004190: aspartic-type endopeptidase activity	7.50E-03
80	GO:0004725: protein tyrosine phosphatase activity	8.10E-03
81	GO:0004722: protein serine/threonine phosphatase activity	8.20E-03
82	GO:0004407: histone deacetylase activity	8.70E-03
83	GO:0004298: threonine-type endopeptidase activity	9.97E-03
84	GO:0001085: RNA polymerase II transcription factor binding	1.41E-02
85	GO:0015385: sodium:proton antiporter activity	1.80E-02
86	GO:0000166: nucleotide binding	1.97E-02
87	GO:0016491: oxidoreductase activity	2.06E-02
88	GO:0004674: protein serine/threonine kinase activity	2.17E-02
89	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.30E-02
90	GO:0046982: protein heterodimerization activity	2.33E-02
91	GO:0000287: magnesium ion binding	2.33E-02
92	GO:0102483: scopolin beta-glucosidase activity	2.39E-02
93	GO:0004806: triglyceride lipase activity	2.39E-02
94	GO:0004683: calmodulin-dependent protein kinase activity	2.39E-02
95	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.57E-02
96	GO:0050660: flavin adenine dinucleotide binding	2.75E-02
97	GO:0004222: metalloendopeptidase activity	2.76E-02
98	GO:0030145: manganese ion binding	2.85E-02
99	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.85E-02
100	GO:0008422: beta-glucosidase activity	3.24E-02
101	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.24E-02
102	GO:0004364: glutathione transferase activity	3.55E-02
103	GO:0005525: GTP binding	3.66E-02
104	GO:0042803: protein homodimerization activity	3.69E-02
105	GO:0005198: structural molecule activity	3.96E-02
106	GO:0051287: NAD binding	4.18E-02
107	GO:0005509: calcium ion binding	4.28E-02
108	GO:0009055: electron carrier activity	4.65E-02
109	GO:0008234: cysteine-type peptidase activity	4.84E-02
110	GO:0031625: ubiquitin protein ligase binding	4.84E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0019822: P4 peroxisome	0.00E+00
3	GO:0005829: cytosol	7.76E-09
4	GO:0005783: endoplasmic reticulum	6.77E-07
5	GO:0005777: peroxisome	5.18E-05
6	GO:0000502: proteasome complex	8.78E-05
7	GO:0009514: glyoxysome	1.56E-04
8	GO:0008540: proteasome regulatory particle, base subcomplex	2.29E-04
9	GO:0005886: plasma membrane	3.05E-04
10	GO:0016602: CCAAT-binding factor complex	4.10E-04
11	GO:0031902: late endosome membrane	5.11E-04
12	GO:0030139: endocytic vesicle	6.19E-04
13	GO:0005737: cytoplasm	7.87E-04
14	GO:0000323: lytic vacuole	8.83E-04
15	GO:0031461: cullin-RING ubiquitin ligase complex	8.83E-04
16	GO:0030136: clathrin-coated vesicle	1.07E-03
17	GO:0005773: vacuole	1.16E-03
18	GO:0005776: autophagosome	1.17E-03
19	GO:0030904: retromer complex	1.83E-03
20	GO:0005771: multivesicular body	1.83E-03
21	GO:0016363: nuclear matrix	2.19E-03
22	GO:0031597: cytosolic proteasome complex	2.19E-03
23	GO:0000794: condensed nuclear chromosome	2.58E-03
24	GO:0031595: nuclear proteasome complex	2.58E-03
25	GO:0000151: ubiquitin ligase complex	2.84E-03
26	GO:0031305: integral component of mitochondrial inner membrane	2.99E-03
27	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	3.41E-03
28	GO:0005819: spindle	3.91E-03
29	GO:0030665: clathrin-coated vesicle membrane	4.33E-03
30	GO:0017119: Golgi transport complex	4.81E-03
31	GO:0005764: lysosome	6.93E-03
32	GO:0010008: endosome membrane	7.58E-03
33	GO:0005789: endoplasmic reticulum membrane	7.75E-03
34	GO:0005730: nucleolus	9.25E-03
35	GO:0005839: proteasome core complex	9.97E-03
36	GO:0005741: mitochondrial outer membrane	9.97E-03
37	GO:0031410: cytoplasmic vesicle	1.06E-02
38	GO:0005623: cell	1.14E-02
39	GO:0009524: phragmoplast	1.17E-02
40	GO:0009506: plasmodesma	1.18E-02
41	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.20E-02
42	GO:0005615: extracellular space	1.72E-02
43	GO:0032580: Golgi cisterna membrane	1.88E-02
44	GO:0005667: transcription factor complex	2.30E-02
45	GO:0016020: membrane	2.56E-02
46	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.61E-02
47	GO:0000786: nucleosome	2.95E-02
48	GO:0005768: endosome	4.15E-02
49	GO:0031966: mitochondrial membrane	4.29E-02
50	GO:0005635: nuclear envelope	4.73E-02
51	GO:0043231: intracellular membrane-bounded organelle	4.77E-02