Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G16000

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006223: uracil salvage0.00E+00
2GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
3GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
4GO:0007638: mechanosensory behavior0.00E+00
5GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
6GO:0042493: response to drug0.00E+00
7GO:1905499: trichome papilla formation0.00E+00
8GO:0008064: regulation of actin polymerization or depolymerization0.00E+00
9GO:0051493: regulation of cytoskeleton organization0.00E+00
10GO:0006633: fatty acid biosynthetic process4.98E-08
11GO:0071555: cell wall organization7.55E-07
12GO:0033591: response to L-ascorbic acid2.51E-05
13GO:0042335: cuticle development3.65E-05
14GO:0042546: cell wall biogenesis5.91E-05
15GO:0010411: xyloglucan metabolic process1.70E-04
16GO:0006833: water transport1.75E-04
17GO:0006869: lipid transport1.78E-04
18GO:0007017: microtubule-based process2.34E-04
19GO:0060627: regulation of vesicle-mediated transport4.02E-04
20GO:0000032: cell wall mannoprotein biosynthetic process4.02E-04
21GO:0046520: sphingoid biosynthetic process4.02E-04
22GO:0010442: guard cell morphogenesis4.02E-04
23GO:0032025: response to cobalt ion4.02E-04
24GO:0043686: co-translational protein modification4.02E-04
25GO:0043007: maintenance of rDNA4.02E-04
26GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway4.02E-04
27GO:0071588: hydrogen peroxide mediated signaling pathway4.02E-04
28GO:0034220: ion transmembrane transport4.68E-04
29GO:0010583: response to cyclopentenone7.34E-04
30GO:0052541: plant-type cell wall cellulose metabolic process8.71E-04
31GO:0010198: synergid death8.71E-04
32GO:0010115: regulation of abscisic acid biosynthetic process8.71E-04
33GO:0045717: negative regulation of fatty acid biosynthetic process8.71E-04
34GO:0005975: carbohydrate metabolic process1.32E-03
35GO:1902448: positive regulation of shade avoidance1.41E-03
36GO:0046168: glycerol-3-phosphate catabolic process1.41E-03
37GO:0090391: granum assembly1.41E-03
38GO:2001295: malonyl-CoA biosynthetic process1.41E-03
39GO:0010207: photosystem II assembly1.57E-03
40GO:0009834: plant-type secondary cell wall biogenesis1.70E-03
41GO:0016051: carbohydrate biosynthetic process2.03E-03
42GO:0009650: UV protection2.04E-03
43GO:0006072: glycerol-3-phosphate metabolic process2.04E-03
44GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity2.04E-03
45GO:0010731: protein glutathionylation2.04E-03
46GO:0006424: glutamyl-tRNA aminoacylation2.04E-03
47GO:0046739: transport of virus in multicellular host2.04E-03
48GO:0050482: arachidonic acid secretion2.04E-03
49GO:0055070: copper ion homeostasis2.04E-03
50GO:0009413: response to flooding2.04E-03
51GO:0009298: GDP-mannose biosynthetic process2.04E-03
52GO:0007231: osmosensory signaling pathway2.04E-03
53GO:0051639: actin filament network formation2.04E-03
54GO:0006085: acetyl-CoA biosynthetic process2.74E-03
55GO:0006183: GTP biosynthetic process2.74E-03
56GO:0033500: carbohydrate homeostasis2.74E-03
57GO:0000919: cell plate assembly2.74E-03
58GO:0044206: UMP salvage2.74E-03
59GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway2.74E-03
60GO:0009956: radial pattern formation2.74E-03
61GO:0015976: carbon utilization2.74E-03
62GO:0051764: actin crosslink formation2.74E-03
63GO:0000304: response to singlet oxygen3.51E-03
64GO:0032543: mitochondrial translation3.51E-03
65GO:0043097: pyrimidine nucleoside salvage3.51E-03
66GO:0031365: N-terminal protein amino acid modification3.51E-03
67GO:0035434: copper ion transmembrane transport3.51E-03
68GO:0016123: xanthophyll biosynthetic process3.51E-03
69GO:0006665: sphingolipid metabolic process3.51E-03
70GO:0016042: lipid catabolic process3.57E-03
71GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.73E-03
72GO:0006629: lipid metabolic process3.75E-03
73GO:0009414: response to water deprivation3.97E-03
74GO:0000271: polysaccharide biosynthetic process4.03E-03
75GO:0006796: phosphate-containing compound metabolic process4.35E-03
76GO:0010190: cytochrome b6f complex assembly4.35E-03
77GO:0006206: pyrimidine nucleobase metabolic process4.35E-03
78GO:0006014: D-ribose metabolic process4.35E-03
79GO:0006561: proline biosynthetic process4.35E-03
80GO:0006751: glutathione catabolic process4.35E-03
81GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.35E-03
82GO:0009826: unidimensional cell growth5.21E-03
83GO:0042372: phylloquinone biosynthetic process5.24E-03
84GO:0009612: response to mechanical stimulus5.24E-03
85GO:0006694: steroid biosynthetic process5.24E-03
86GO:0009554: megasporogenesis5.24E-03
87GO:0010019: chloroplast-nucleus signaling pathway5.24E-03
88GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity5.24E-03
89GO:0071554: cell wall organization or biogenesis5.36E-03
90GO:0032502: developmental process5.73E-03
91GO:0010196: nonphotochemical quenching6.19E-03
92GO:0071669: plant-type cell wall organization or biogenesis6.19E-03
93GO:0009645: response to low light intensity stimulus6.19E-03
94GO:0098869: cellular oxidant detoxification6.19E-03
95GO:0009828: plant-type cell wall loosening6.51E-03
96GO:0048564: photosystem I assembly7.20E-03
97GO:0045292: mRNA cis splicing, via spliceosome7.20E-03
98GO:0010928: regulation of auxin mediated signaling pathway7.20E-03
99GO:0009690: cytokinin metabolic process7.20E-03
100GO:0045010: actin nucleation7.20E-03
101GO:0006644: phospholipid metabolic process7.20E-03
102GO:0016126: sterol biosynthetic process7.77E-03
103GO:0010027: thylakoid membrane organization7.77E-03
104GO:0010497: plasmodesmata-mediated intercellular transport8.26E-03
105GO:0032544: plastid translation8.26E-03
106GO:0009808: lignin metabolic process8.26E-03
107GO:0009932: cell tip growth8.26E-03
108GO:0015995: chlorophyll biosynthetic process9.16E-03
109GO:0000373: Group II intron splicing9.38E-03
110GO:0045454: cell redox homeostasis1.01E-02
111GO:0042744: hydrogen peroxide catabolic process1.01E-02
112GO:0009638: phototropism1.06E-02
113GO:0042761: very long-chain fatty acid biosynthetic process1.06E-02
114GO:0009870: defense response signaling pathway, resistance gene-dependent1.18E-02
115GO:0006535: cysteine biosynthetic process from serine1.18E-02
116GO:0009688: abscisic acid biosynthetic process1.18E-02
117GO:0043069: negative regulation of programmed cell death1.18E-02
118GO:0007568: aging1.18E-02
119GO:0006949: syncytium formation1.18E-02
120GO:0006816: calcium ion transport1.30E-02
121GO:0006415: translational termination1.30E-02
122GO:0009750: response to fructose1.30E-02
123GO:0018119: peptidyl-cysteine S-nitrosylation1.30E-02
124GO:0030148: sphingolipid biosynthetic process1.30E-02
125GO:0009684: indoleacetic acid biosynthetic process1.30E-02
126GO:0010015: root morphogenesis1.30E-02
127GO:0000038: very long-chain fatty acid metabolic process1.30E-02
128GO:0006790: sulfur compound metabolic process1.44E-02
129GO:0016024: CDP-diacylglycerol biosynthetic process1.44E-02
130GO:0030001: metal ion transport1.47E-02
131GO:0006631: fatty acid metabolic process1.54E-02
132GO:0030036: actin cytoskeleton organization1.57E-02
133GO:0050826: response to freezing1.57E-02
134GO:0009767: photosynthetic electron transport chain1.57E-02
135GO:0010143: cutin biosynthetic process1.71E-02
136GO:0007034: vacuolar transport1.71E-02
137GO:0009933: meristem structural organization1.71E-02
138GO:0070588: calcium ion transmembrane transport1.86E-02
139GO:0046854: phosphatidylinositol phosphorylation1.86E-02
140GO:0009969: xyloglucan biosynthetic process1.86E-02
141GO:0010025: wax biosynthetic process2.01E-02
142GO:0006071: glycerol metabolic process2.01E-02
143GO:0009664: plant-type cell wall organization2.10E-02
144GO:0042538: hyperosmotic salinity response2.10E-02
145GO:0009116: nucleoside metabolic process2.16E-02
146GO:0051017: actin filament bundle assembly2.16E-02
147GO:0019344: cysteine biosynthetic process2.16E-02
148GO:0006486: protein glycosylation2.25E-02
149GO:0019953: sexual reproduction2.32E-02
150GO:0010026: trichome differentiation2.32E-02
151GO:0031408: oxylipin biosynthetic process2.48E-02
152GO:0016998: cell wall macromolecule catabolic process2.48E-02
153GO:0048511: rhythmic process2.48E-02
154GO:0030245: cellulose catabolic process2.64E-02
155GO:0031348: negative regulation of defense response2.64E-02
156GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.81E-02
157GO:0009411: response to UV2.81E-02
158GO:0006012: galactose metabolic process2.81E-02
159GO:0010091: trichome branching2.99E-02
160GO:0019722: calcium-mediated signaling2.99E-02
161GO:0070417: cellular response to cold3.16E-02
162GO:0009624: response to nematode3.21E-02
163GO:0009416: response to light stimulus3.24E-02
164GO:0000413: protein peptidyl-prolyl isomerization3.34E-02
165GO:0008360: regulation of cell shape3.53E-02
166GO:0009958: positive gravitropism3.53E-02
167GO:0045489: pectin biosynthetic process3.53E-02
168GO:0010305: leaf vascular tissue pattern formation3.53E-02
169GO:0010182: sugar mediated signaling pathway3.53E-02
170GO:0042752: regulation of circadian rhythm3.71E-02
171GO:0019252: starch biosynthetic process3.90E-02
172GO:0048510: regulation of timing of transition from vegetative to reproductive phase4.09E-02
173GO:0000302: response to reactive oxygen species4.09E-02
174GO:0016132: brassinosteroid biosynthetic process4.09E-02
175GO:0007264: small GTPase mediated signal transduction4.29E-02
176GO:0010090: trichome morphogenesis4.49E-02
177GO:0055114: oxidation-reduction process4.55E-02
178GO:0016125: sterol metabolic process4.69E-02
179GO:0009567: double fertilization forming a zygote and endosperm4.69E-02
180GO:0007267: cell-cell signaling4.90E-02
RankGO TermAdjusted P value
1GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
2GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
3GO:0043864: indoleacetamide hydrolase activity0.00E+00
4GO:0004496: mevalonate kinase activity0.00E+00
5GO:0010301: xanthoxin dehydrogenase activity0.00E+00
6GO:0050613: delta14-sterol reductase activity0.00E+00
7GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
8GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
9GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
10GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
11GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
12GO:0050614: delta24-sterol reductase activity0.00E+00
13GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity7.22E-06
14GO:0005528: FK506 binding9.98E-06
15GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity5.48E-05
16GO:0016762: xyloglucan:xyloglucosyl transferase activity6.41E-05
17GO:0003755: peptidyl-prolyl cis-trans isomerase activity7.63E-05
18GO:0008289: lipid binding1.22E-04
19GO:0003989: acetyl-CoA carboxylase activity1.50E-04
20GO:0016798: hydrolase activity, acting on glycosyl bonds1.70E-04
21GO:0051753: mannan synthase activity2.88E-04
22GO:0051920: peroxiredoxin activity2.88E-04
23GO:0004560: alpha-L-fucosidase activity4.02E-04
24GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity4.02E-04
25GO:0052631: sphingolipid delta-8 desaturase activity4.02E-04
26GO:0080132: fatty acid alpha-hydroxylase activity4.02E-04
27GO:0004476: mannose-6-phosphate isomerase activity4.02E-04
28GO:0009374: biotin binding4.02E-04
29GO:0042586: peptide deformylase activity4.02E-04
30GO:0004328: formamidase activity4.02E-04
31GO:0000170: sphingosine hydroxylase activity4.02E-04
32GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity4.02E-04
33GO:0016209: antioxidant activity4.66E-04
34GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.93E-04
35GO:0052689: carboxylic ester hydrolase activity5.53E-04
36GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors6.82E-04
37GO:0042284: sphingolipid delta-4 desaturase activity8.71E-04
38GO:0003839: gamma-glutamylcyclotransferase activity8.71E-04
39GO:0003938: IMP dehydrogenase activity8.71E-04
40GO:0005200: structural constituent of cytoskeleton9.28E-04
41GO:0015250: water channel activity1.07E-03
42GO:0008378: galactosyltransferase activity1.23E-03
43GO:0016788: hydrolase activity, acting on ester bonds1.33E-03
44GO:0016531: copper chaperone activity1.41E-03
45GO:0005504: fatty acid binding1.41E-03
46GO:0019829: cation-transporting ATPase activity1.41E-03
47GO:0004148: dihydrolipoyl dehydrogenase activity1.41E-03
48GO:0004075: biotin carboxylase activity1.41E-03
49GO:0045174: glutathione dehydrogenase (ascorbate) activity1.41E-03
50GO:0030267: glyoxylate reductase (NADP) activity1.41E-03
51GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.41E-03
52GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.97E-03
53GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.97E-03
54GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.97E-03
55GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity2.04E-03
56GO:0003878: ATP citrate synthase activity2.04E-03
57GO:0016149: translation release factor activity, codon specific2.04E-03
58GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides2.04E-03
59GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.04E-03
60GO:0016851: magnesium chelatase activity2.04E-03
61GO:0001872: (1->3)-beta-D-glucan binding2.04E-03
62GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.74E-03
63GO:0045430: chalcone isomerase activity2.74E-03
64GO:0046527: glucosyltransferase activity2.74E-03
65GO:0052793: pectin acetylesterase activity2.74E-03
66GO:0004845: uracil phosphoribosyltransferase activity2.74E-03
67GO:0016836: hydro-lyase activity2.74E-03
68GO:0009922: fatty acid elongase activity3.51E-03
69GO:0004623: phospholipase A2 activity3.51E-03
70GO:0004040: amidase activity3.51E-03
71GO:0003924: GTPase activity3.75E-03
72GO:0004629: phospholipase C activity4.35E-03
73GO:0004130: cytochrome-c peroxidase activity4.35E-03
74GO:0016208: AMP binding4.35E-03
75GO:0004366: glycerol-3-phosphate O-acyltransferase activity4.35E-03
76GO:0016688: L-ascorbate peroxidase activity4.35E-03
77GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.35E-03
78GO:0008200: ion channel inhibitor activity4.35E-03
79GO:0080030: methyl indole-3-acetate esterase activity4.35E-03
80GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.24E-03
81GO:0004849: uridine kinase activity5.24E-03
82GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.24E-03
83GO:0004747: ribokinase activity5.24E-03
84GO:0004435: phosphatidylinositol phospholipase C activity5.24E-03
85GO:0004124: cysteine synthase activity5.24E-03
86GO:0004601: peroxidase activity5.52E-03
87GO:0004650: polygalacturonase activity5.73E-03
88GO:0004427: inorganic diphosphatase activity6.19E-03
89GO:0043295: glutathione binding6.19E-03
90GO:0004034: aldose 1-epimerase activity7.20E-03
91GO:0004033: aldo-keto reductase (NADP) activity7.20E-03
92GO:0008865: fructokinase activity7.20E-03
93GO:0016413: O-acetyltransferase activity7.34E-03
94GO:0016491: oxidoreductase activity7.58E-03
95GO:0005525: GTP binding8.17E-03
96GO:0005375: copper ion transmembrane transporter activity8.26E-03
97GO:0008889: glycerophosphodiester phosphodiesterase activity9.38E-03
98GO:0003747: translation release factor activity9.38E-03
99GO:0015020: glucuronosyltransferase activity1.18E-02
100GO:0005089: Rho guanyl-nucleotide exchange factor activity1.30E-02
101GO:0047372: acylglycerol lipase activity1.30E-02
102GO:0004565: beta-galactosidase activity1.57E-02
103GO:0004022: alcohol dehydrogenase (NAD) activity1.57E-02
104GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.57E-02
105GO:0004089: carbonate dehydratase activity1.57E-02
106GO:0005262: calcium channel activity1.57E-02
107GO:0004364: glutathione transferase activity1.60E-02
108GO:0005516: calmodulin binding2.07E-02
109GO:0004857: enzyme inhibitor activity2.16E-02
110GO:0008324: cation transmembrane transporter activity2.32E-02
111GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.64E-02
112GO:0030570: pectate lyase activity2.81E-02
113GO:0008810: cellulase activity2.81E-02
114GO:0016760: cellulose synthase (UDP-forming) activity2.81E-02
115GO:0008514: organic anion transmembrane transporter activity2.99E-02
116GO:0003713: transcription coactivator activity3.53E-02
117GO:0016853: isomerase activity3.71E-02
118GO:0004871: signal transducer activity3.90E-02
119GO:0019901: protein kinase binding3.90E-02
120GO:0016758: transferase activity, transferring hexosyl groups3.90E-02
121GO:0019843: rRNA binding4.01E-02
122GO:0051015: actin filament binding4.49E-02
123GO:0016791: phosphatase activity4.69E-02
124GO:0016722: oxidoreductase activity, oxidizing metal ions4.90E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0070971: endoplasmic reticulum exit site0.00E+00
3GO:0031225: anchored component of membrane1.55E-13
4GO:0046658: anchored component of plasma membrane3.35E-12
5GO:0009570: chloroplast stroma4.34E-11
6GO:0009505: plant-type cell wall7.16E-09
7GO:0009507: chloroplast8.34E-09
8GO:0009534: chloroplast thylakoid3.98E-08
9GO:0048046: apoplast5.60E-08
10GO:0009941: chloroplast envelope7.44E-08
11GO:0005886: plasma membrane8.94E-08
12GO:0005618: cell wall1.08E-07
13GO:0009543: chloroplast thylakoid lumen3.07E-07
14GO:0005576: extracellular region1.90E-06
15GO:0031977: thylakoid lumen3.09E-06
16GO:0009579: thylakoid1.75E-05
17GO:0009535: chloroplast thylakoid membrane4.47E-05
18GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex4.02E-04
19GO:0009515: granal stacked thylakoid4.02E-04
20GO:0009923: fatty acid elongase complex4.02E-04
21GO:0045298: tubulin complex6.82E-04
22GO:0010007: magnesium chelatase complex1.41E-03
23GO:0009509: chromoplast1.41E-03
24GO:0009317: acetyl-CoA carboxylase complex1.41E-03
25GO:0032432: actin filament bundle2.04E-03
26GO:0009331: glycerol-3-phosphate dehydrogenase complex2.04E-03
27GO:0009346: citrate lyase complex2.04E-03
28GO:0015630: microtubule cytoskeleton2.04E-03
29GO:0009506: plasmodesma2.51E-03
30GO:0016020: membrane2.63E-03
31GO:0031209: SCAR complex4.35E-03
32GO:0000815: ESCRT III complex5.24E-03
33GO:0009533: chloroplast stromal thylakoid6.19E-03
34GO:0009536: plastid6.51E-03
35GO:0005794: Golgi apparatus7.53E-03
36GO:0005884: actin filament1.30E-02
37GO:0016021: integral component of membrane1.36E-02
38GO:0030176: integral component of endoplasmic reticulum membrane1.86E-02
39GO:0043234: protein complex2.01E-02
40GO:0000139: Golgi membrane2.18E-02
41GO:0005887: integral component of plasma membrane2.18E-02
42GO:0031410: cytoplasmic vesicle2.64E-02
43GO:0005874: microtubule2.82E-02
44GO:0031969: chloroplast membrane2.95E-02
45GO:0010287: plastoglobule3.80E-02
46GO:0019898: extrinsic component of membrane3.90E-02
47GO:0005778: peroxisomal membrane4.90E-02
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Gene type



Gene DE type