GO Enrichment Analysis of Co-expressed Genes with
AT5G14210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 8.12E-09 |
| 5 | GO:0009773: photosynthetic electron transport in photosystem I | 6.48E-07 |
| 6 | GO:0006546: glycine catabolic process | 3.22E-06 |
| 7 | GO:0000481: maturation of 5S rRNA | 5.48E-05 |
| 8 | GO:0071461: cellular response to redox state | 5.48E-05 |
| 9 | GO:0034337: RNA folding | 5.48E-05 |
| 10 | GO:0071588: hydrogen peroxide mediated signaling pathway | 5.48E-05 |
| 11 | GO:0006824: cobalt ion transport | 5.48E-05 |
| 12 | GO:0043489: RNA stabilization | 5.48E-05 |
| 13 | GO:0010207: photosystem II assembly | 9.76E-05 |
| 14 | GO:0015979: photosynthesis | 1.22E-04 |
| 15 | GO:0034755: iron ion transmembrane transport | 1.34E-04 |
| 16 | GO:0080005: photosystem stoichiometry adjustment | 1.34E-04 |
| 17 | GO:0006013: mannose metabolic process | 2.28E-04 |
| 18 | GO:0006518: peptide metabolic process | 2.28E-04 |
| 19 | GO:2001141: regulation of RNA biosynthetic process | 3.33E-04 |
| 20 | GO:0010731: protein glutathionylation | 3.33E-04 |
| 21 | GO:0019464: glycine decarboxylation via glycine cleavage system | 4.45E-04 |
| 22 | GO:0045727: positive regulation of translation | 4.45E-04 |
| 23 | GO:0042549: photosystem II stabilization | 6.92E-04 |
| 24 | GO:0009631: cold acclimation | 7.69E-04 |
| 25 | GO:0010019: chloroplast-nucleus signaling pathway | 8.25E-04 |
| 26 | GO:0032508: DNA duplex unwinding | 1.11E-03 |
| 27 | GO:0030091: protein repair | 1.11E-03 |
| 28 | GO:0009850: auxin metabolic process | 1.11E-03 |
| 29 | GO:0032544: plastid translation | 1.26E-03 |
| 30 | GO:0071482: cellular response to light stimulus | 1.26E-03 |
| 31 | GO:0009657: plastid organization | 1.26E-03 |
| 32 | GO:0006783: heme biosynthetic process | 1.41E-03 |
| 33 | GO:0000373: Group II intron splicing | 1.41E-03 |
| 34 | GO:0048589: developmental growth | 1.41E-03 |
| 35 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.41E-03 |
| 36 | GO:0006397: mRNA processing | 1.49E-03 |
| 37 | GO:0006417: regulation of translation | 1.57E-03 |
| 38 | GO:0010205: photoinhibition | 1.58E-03 |
| 39 | GO:0006779: porphyrin-containing compound biosynthetic process | 1.58E-03 |
| 40 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.75E-03 |
| 41 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 1.75E-03 |
| 42 | GO:0055114: oxidation-reduction process | 1.92E-03 |
| 43 | GO:0006352: DNA-templated transcription, initiation | 1.93E-03 |
| 44 | GO:0019684: photosynthesis, light reaction | 1.93E-03 |
| 45 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.93E-03 |
| 46 | GO:0006396: RNA processing | 2.06E-03 |
| 47 | GO:0010152: pollen maturation | 2.11E-03 |
| 48 | GO:0010628: positive regulation of gene expression | 2.30E-03 |
| 49 | GO:0006006: glucose metabolic process | 2.30E-03 |
| 50 | GO:0009718: anthocyanin-containing compound biosynthetic process | 2.30E-03 |
| 51 | GO:0010102: lateral root morphogenesis | 2.30E-03 |
| 52 | GO:0010030: positive regulation of seed germination | 2.70E-03 |
| 53 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.90E-03 |
| 54 | GO:0009416: response to light stimulus | 2.91E-03 |
| 55 | GO:0009686: gibberellin biosynthetic process | 4.00E-03 |
| 56 | GO:0048443: stamen development | 4.23E-03 |
| 57 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 4.47E-03 |
| 58 | GO:0042631: cellular response to water deprivation | 4.71E-03 |
| 59 | GO:0010268: brassinosteroid homeostasis | 4.96E-03 |
| 60 | GO:0016132: brassinosteroid biosynthetic process | 5.74E-03 |
| 61 | GO:0000302: response to reactive oxygen species | 5.74E-03 |
| 62 | GO:0016125: sterol metabolic process | 6.55E-03 |
| 63 | GO:0042128: nitrate assimilation | 7.99E-03 |
| 64 | GO:0018298: protein-chromophore linkage | 8.91E-03 |
| 65 | GO:0009407: toxin catabolic process | 9.54E-03 |
| 66 | GO:0009409: response to cold | 1.05E-02 |
| 67 | GO:0045087: innate immune response | 1.05E-02 |
| 68 | GO:0008152: metabolic process | 1.06E-02 |
| 69 | GO:0034599: cellular response to oxidative stress | 1.09E-02 |
| 70 | GO:0010114: response to red light | 1.26E-02 |
| 71 | GO:0009644: response to high light intensity | 1.33E-02 |
| 72 | GO:0009636: response to toxic substance | 1.37E-02 |
| 73 | GO:0006364: rRNA processing | 1.55E-02 |
| 74 | GO:0009735: response to cytokinin | 1.57E-02 |
| 75 | GO:0045893: positive regulation of transcription, DNA-templated | 1.97E-02 |
| 76 | GO:0042744: hydrogen peroxide catabolic process | 2.57E-02 |
| 77 | GO:0006633: fatty acid biosynthetic process | 2.75E-02 |
| 78 | GO:0007623: circadian rhythm | 2.94E-02 |
| 79 | GO:0009451: RNA modification | 2.99E-02 |
| 80 | GO:0009733: response to auxin | 3.90E-02 |
| 81 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 2 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0016851: magnesium chelatase activity | 1.66E-06 |
| 5 | GO:0004328: formamidase activity | 5.48E-05 |
| 6 | GO:0045485: omega-6 fatty acid desaturase activity | 5.48E-05 |
| 7 | GO:0051777: ent-kaurenoate oxidase activity | 5.48E-05 |
| 8 | GO:0052638: indole-3-butyrate beta-glucosyltransferase activity | 5.48E-05 |
| 9 | GO:0008266: poly(U) RNA binding | 9.76E-05 |
| 10 | GO:0008883: glutamyl-tRNA reductase activity | 1.34E-04 |
| 11 | GO:0004047: aminomethyltransferase activity | 1.34E-04 |
| 12 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 1.34E-04 |
| 13 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 2.28E-04 |
| 14 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 3.33E-04 |
| 15 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 3.33E-04 |
| 16 | GO:0001053: plastid sigma factor activity | 4.45E-04 |
| 17 | GO:0010011: auxin binding | 4.45E-04 |
| 18 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 4.45E-04 |
| 19 | GO:0016987: sigma factor activity | 4.45E-04 |
| 20 | GO:0016688: L-ascorbate peroxidase activity | 6.92E-04 |
| 21 | GO:0004130: cytochrome-c peroxidase activity | 6.92E-04 |
| 22 | GO:0004559: alpha-mannosidase activity | 8.25E-04 |
| 23 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 8.25E-04 |
| 24 | GO:0050661: NADP binding | 9.50E-04 |
| 25 | GO:0004364: glutathione transferase activity | 1.03E-03 |
| 26 | GO:0005381: iron ion transmembrane transporter activity | 1.58E-03 |
| 27 | GO:0005528: FK506 binding | 3.11E-03 |
| 28 | GO:0022891: substrate-specific transmembrane transporter activity | 4.00E-03 |
| 29 | GO:0003727: single-stranded RNA binding | 4.23E-03 |
| 30 | GO:0050662: coenzyme binding | 5.22E-03 |
| 31 | GO:0008483: transaminase activity | 6.83E-03 |
| 32 | GO:0016168: chlorophyll binding | 7.69E-03 |
| 33 | GO:0003824: catalytic activity | 8.02E-03 |
| 34 | GO:0004222: metalloendopeptidase activity | 9.54E-03 |
| 35 | GO:0003729: mRNA binding | 1.18E-02 |
| 36 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.33E-02 |
| 37 | GO:0043621: protein self-association | 1.33E-02 |
| 38 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.40E-02 |
| 39 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.55E-02 |
| 40 | GO:0003690: double-stranded DNA binding | 1.59E-02 |
| 41 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 1.79E-02 |
| 42 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.87E-02 |
| 43 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.87E-02 |
| 44 | GO:0016758: transferase activity, transferring hexosyl groups | 2.29E-02 |
| 45 | GO:0030246: carbohydrate binding | 2.31E-02 |
| 46 | GO:0019843: rRNA binding | 2.34E-02 |
| 47 | GO:0008194: UDP-glycosyltransferase activity | 3.19E-02 |
| 48 | GO:0003743: translation initiation factor activity | 3.29E-02 |
| 49 | GO:0016788: hydrolase activity, acting on ester bonds | 4.07E-02 |
| 50 | GO:0043531: ADP binding | 4.29E-02 |
| 51 | GO:0016491: oxidoreductase activity | 4.57E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043224: nuclear SCF ubiquitin ligase complex | 0.00E+00 |
| 2 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 8.32E-18 |
| 4 | GO:0009534: chloroplast thylakoid | 1.69E-17 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 3.11E-12 |
| 6 | GO:0009570: chloroplast stroma | 1.10E-11 |
| 7 | GO:0009941: chloroplast envelope | 5.25E-08 |
| 8 | GO:0010007: magnesium chelatase complex | 6.89E-07 |
| 9 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.56E-05 |
| 10 | GO:0009579: thylakoid | 8.58E-05 |
| 11 | GO:0005960: glycine cleavage complex | 3.33E-04 |
| 12 | GO:0009523: photosystem II | 3.37E-04 |
| 13 | GO:0030529: intracellular ribonucleoprotein complex | 5.19E-04 |
| 14 | GO:0031969: chloroplast membrane | 8.76E-04 |
| 15 | GO:0009706: chloroplast inner membrane | 2.00E-03 |
| 16 | GO:0032040: small-subunit processome | 2.11E-03 |
| 17 | GO:0030095: chloroplast photosystem II | 2.49E-03 |
| 18 | GO:0009543: chloroplast thylakoid lumen | 2.49E-03 |
| 19 | GO:0043234: protein complex | 2.90E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 3.32E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 5.48E-03 |
| 22 | GO:0010287: plastoglobule | 2.25E-02 |
| 23 | GO:0048046: apoplast | 3.62E-02 |