co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G14120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006399: tRNA metabolic process	0.00E+00
2	GO:0042593: glucose homeostasis	0.00E+00
3	GO:1900000: regulation of anthocyanin catabolic process	0.00E+00
4	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
5	GO:1901698: response to nitrogen compound	0.00E+00
6	GO:0061635: regulation of protein complex stability	0.00E+00
7	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
8	GO:0006412: translation	5.42E-05
9	GO:0006723: cuticle hydrocarbon biosynthetic process	1.48E-04
10	GO:0042371: vitamin K biosynthetic process	1.48E-04
11	GO:0034628: 'de novo' NAD biosynthetic process from aspartate	1.48E-04
12	GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process	1.48E-04
13	GO:0070509: calcium ion import	1.48E-04
14	GO:0007263: nitric oxide mediated signal transduction	1.48E-04
15	GO:0046520: sphingoid biosynthetic process	1.48E-04
16	GO:0006779: porphyrin-containing compound biosynthetic process	1.92E-04
17	GO:0006782: protoporphyrinogen IX biosynthetic process	2.27E-04
18	GO:0015706: nitrate transport	3.05E-04
19	GO:0034755: iron ion transmembrane transport	3.38E-04
20	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	3.38E-04
21	GO:0030388: fructose 1,6-bisphosphate metabolic process	3.38E-04
22	GO:0009725: response to hormone	3.47E-04
23	GO:0010167: response to nitrate	4.40E-04
24	GO:0010025: wax biosynthetic process	4.90E-04
25	GO:0015840: urea transport	5.54E-04
26	GO:0071705: nitrogen compound transport	5.54E-04
27	GO:0006696: ergosterol biosynthetic process	5.54E-04
28	GO:0051176: positive regulation of sulfur metabolic process	5.54E-04
29	GO:0005977: glycogen metabolic process	5.54E-04
30	GO:0006011: UDP-glucose metabolic process	5.54E-04
31	GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement	5.54E-04
32	GO:0006000: fructose metabolic process	5.54E-04
33	GO:0043447: alkane biosynthetic process	5.54E-04
34	GO:0006013: mannose metabolic process	5.54E-04
35	GO:0009826: unidimensional cell growth	5.78E-04
36	GO:0009735: response to cytokinin	6.84E-04
37	GO:2001141: regulation of RNA biosynthetic process	7.93E-04
38	GO:1902476: chloride transmembrane transport	7.93E-04
39	GO:0080170: hydrogen peroxide transmembrane transport	7.93E-04
40	GO:0009800: cinnamic acid biosynthetic process	7.93E-04
41	GO:0001678: cellular glucose homeostasis	7.93E-04
42	GO:0006096: glycolytic process	8.23E-04
43	GO:0042335: cuticle development	9.81E-04
44	GO:0042545: cell wall modification	9.96E-04
45	GO:0015979: photosynthesis	1.03E-03
46	GO:0071249: cellular response to nitrate	1.05E-03
47	GO:0030104: water homeostasis	1.05E-03
48	GO:0016132: brassinosteroid biosynthetic process	1.29E-03
49	GO:0006564: L-serine biosynthetic process	1.33E-03
50	GO:0009435: NAD biosynthetic process	1.33E-03
51	GO:0009247: glycolipid biosynthetic process	1.33E-03
52	GO:0010942: positive regulation of cell death	1.63E-03
53	GO:0006354: DNA-templated transcription, elongation	1.63E-03
54	GO:0042549: photosystem II stabilization	1.63E-03
55	GO:0006559: L-phenylalanine catabolic process	1.63E-03
56	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.63E-03
57	GO:0032973: amino acid export	1.63E-03
58	GO:0010027: thylakoid membrane organization	1.85E-03
59	GO:0006694: steroid biosynthetic process	1.96E-03
60	GO:0046835: carbohydrate phosphorylation	1.96E-03
61	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	1.96E-03
62	GO:0045490: pectin catabolic process	2.05E-03
63	GO:0007623: circadian rhythm	2.05E-03
64	GO:0015995: chlorophyll biosynthetic process	2.17E-03
65	GO:0050829: defense response to Gram-negative bacterium	2.30E-03
66	GO:0051510: regulation of unidimensional cell growth	2.30E-03
67	GO:0009610: response to symbiotic fungus	2.30E-03
68	GO:0009772: photosynthetic electron transport in photosystem II	2.30E-03
69	GO:0043090: amino acid import	2.30E-03
70	GO:0030497: fatty acid elongation	2.30E-03
71	GO:0006821: chloride transport	2.30E-03
72	GO:0009690: cytokinin metabolic process	2.66E-03
73	GO:0006605: protein targeting	2.66E-03
74	GO:0019375: galactolipid biosynthetic process	2.66E-03
75	GO:0000028: ribosomal small subunit assembly	2.66E-03
76	GO:0009231: riboflavin biosynthetic process	2.66E-03
77	GO:0052543: callose deposition in cell wall	2.66E-03
78	GO:0007155: cell adhesion	2.66E-03
79	GO:0008610: lipid biosynthetic process	2.66E-03
80	GO:0006402: mRNA catabolic process	2.66E-03
81	GO:0032544: plastid translation	3.04E-03
82	GO:0009808: lignin metabolic process	3.04E-03
83	GO:0009699: phenylpropanoid biosynthetic process	3.04E-03
84	GO:0006002: fructose 6-phosphate metabolic process	3.04E-03
85	GO:0071482: cellular response to light stimulus	3.04E-03
86	GO:0009657: plastid organization	3.04E-03
87	GO:0006783: heme biosynthetic process	3.44E-03
88	GO:0009060: aerobic respiration	3.44E-03
89	GO:0010206: photosystem II repair	3.44E-03
90	GO:0080144: amino acid homeostasis	3.44E-03
91	GO:0010205: photoinhibition	3.86E-03
92	GO:0010114: response to red light	3.90E-03
93	GO:0006535: cysteine biosynthetic process from serine	4.29E-03
94	GO:0009299: mRNA transcription	4.29E-03
95	GO:0080167: response to karrikin	4.68E-03
96	GO:0006879: cellular iron ion homeostasis	4.73E-03
97	GO:0006352: DNA-templated transcription, initiation	4.73E-03
98	GO:0009750: response to fructose	4.73E-03
99	GO:0000038: very long-chain fatty acid metabolic process	4.73E-03
100	GO:0009698: phenylpropanoid metabolic process	4.73E-03
101	GO:0005983: starch catabolic process	5.20E-03
102	GO:2000028: regulation of photoperiodism, flowering	5.68E-03
103	GO:0006094: gluconeogenesis	5.68E-03
104	GO:0005986: sucrose biosynthetic process	5.68E-03
105	GO:0010207: photosystem II assembly	6.17E-03
106	GO:0009626: plant-type hypersensitive response	6.61E-03
107	GO:0010030: positive regulation of seed germination	6.67E-03
108	GO:0006636: unsaturated fatty acid biosynthetic process	7.20E-03
109	GO:0006833: water transport	7.20E-03
110	GO:0019762: glucosinolate catabolic process	7.20E-03
111	GO:0019344: cysteine biosynthetic process	7.74E-03
112	GO:0080147: root hair cell development	7.74E-03
113	GO:0009742: brassinosteroid mediated signaling pathway	7.91E-03
114	GO:0006418: tRNA aminoacylation for protein translation	8.29E-03
115	GO:0019915: lipid storage	8.85E-03
116	GO:0031408: oxylipin biosynthetic process	8.85E-03
117	GO:0035428: hexose transmembrane transport	9.43E-03
118	GO:0006730: one-carbon metabolic process	9.43E-03
119	GO:0016226: iron-sulfur cluster assembly	9.43E-03
120	GO:0009306: protein secretion	1.06E-02
121	GO:0006284: base-excision repair	1.06E-02
122	GO:0016117: carotenoid biosynthetic process	1.13E-02
123	GO:0009793: embryo development ending in seed dormancy	1.18E-02
124	GO:0042391: regulation of membrane potential	1.19E-02
125	GO:0034220: ion transmembrane transport	1.19E-02
126	GO:0000413: protein peptidyl-prolyl isomerization	1.19E-02
127	GO:0010087: phloem or xylem histogenesis	1.19E-02
128	GO:0042631: cellular response to water deprivation	1.19E-02
129	GO:0046323: glucose import	1.25E-02
130	GO:0009741: response to brassinosteroid	1.25E-02
131	GO:0009791: post-embryonic development	1.39E-02
132	GO:0048235: pollen sperm cell differentiation	1.52E-02
133	GO:0010583: response to cyclopentenone	1.52E-02
134	GO:0009416: response to light stimulus	1.59E-02
135	GO:0030163: protein catabolic process	1.59E-02
136	GO:0009409: response to cold	1.67E-02
137	GO:0009567: double fertilization forming a zygote and endosperm	1.67E-02
138	GO:0016126: sterol biosynthetic process	1.89E-02
139	GO:0009658: chloroplast organization	2.01E-02
140	GO:0042128: nitrate assimilation	2.04E-02
141	GO:0042254: ribosome biogenesis	2.04E-02
142	GO:0010411: xyloglucan metabolic process	2.12E-02
143	GO:0016311: dephosphorylation	2.20E-02
144	GO:0009651: response to salt stress	2.24E-02
145	GO:0018298: protein-chromophore linkage	2.28E-02
146	GO:0048481: plant ovule development	2.28E-02
147	GO:0000160: phosphorelay signal transduction system	2.36E-02
148	GO:0009834: plant-type secondary cell wall biogenesis	2.45E-02
149	GO:0007568: aging	2.53E-02
150	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.58E-02
151	GO:0009637: response to blue light	2.70E-02
152	GO:0055114: oxidation-reduction process	2.80E-02
153	GO:0009640: photomorphogenesis	3.23E-02
154	GO:0009744: response to sucrose	3.23E-02
155	GO:0042546: cell wall biogenesis	3.33E-02
156	GO:0009644: response to high light intensity	3.42E-02
157	GO:0006855: drug transmembrane transport	3.61E-02
158	GO:0009736: cytokinin-activated signaling pathway	4.00E-02
159	GO:0006857: oligopeptide transport	4.20E-02
160	GO:0006417: regulation of translation	4.30E-02
161	GO:0009733: response to auxin	4.42E-02
162	GO:0048316: seed development	4.61E-02
163	GO:0009740: gibberellic acid mediated signaling pathway	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
2	GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity	0.00E+00
3	GO:0046905: phytoene synthase activity	0.00E+00
4	GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity	0.00E+00
5	GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity	0.00E+00
6	GO:0050614: delta24-sterol reductase activity	0.00E+00
7	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
8	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
9	GO:0008987: quinolinate synthetase A activity	0.00E+00
10	GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity	0.00E+00
11	GO:0019843: rRNA binding	2.56E-11
12	GO:0003735: structural constituent of ribosome	6.07E-06
13	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.90E-05
14	GO:0051996: squalene synthase activity	1.48E-04
15	GO:0015200: methylammonium transmembrane transporter activity	1.48E-04
16	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	1.48E-04
17	GO:0000248: C-5 sterol desaturase activity	1.48E-04
18	GO:0000170: sphingosine hydroxylase activity	1.48E-04
19	GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity	1.48E-04
20	GO:0047807: cytokinin 7-beta-glucosyltransferase activity	1.48E-04
21	GO:0004655: porphobilinogen synthase activity	1.48E-04
22	GO:0080062: cytokinin 9-beta-glucosyltransferase activity	1.48E-04
23	GO:0009671: nitrate:proton symporter activity	1.48E-04
24	GO:0004310: farnesyl-diphosphate farnesyltransferase activity	3.38E-04
25	GO:0004326: tetrahydrofolylpolyglutamate synthase activity	3.38E-04
26	GO:0043425: bHLH transcription factor binding	3.38E-04
27	GO:0004617: phosphoglycerate dehydrogenase activity	3.38E-04
28	GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity	3.38E-04
29	GO:0046509: 1,2-diacylglycerol 3-beta-galactosyltransferase activity	3.38E-04
30	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	3.38E-04
31	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.38E-04
32	GO:0042284: sphingolipid delta-4 desaturase activity	3.38E-04
33	GO:0005528: FK506 binding	5.43E-04
34	GO:0003935: GTP cyclohydrolase II activity	5.54E-04
35	GO:0047334: diphosphate-fructose-6-phosphate 1-phosphotransferase activity	5.54E-04
36	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	5.54E-04
37	GO:0047274: galactinol-sucrose galactosyltransferase activity	5.54E-04
38	GO:0045548: phenylalanine ammonia-lyase activity	5.54E-04
39	GO:0090729: toxin activity	5.54E-04
40	GO:0002161: aminoacyl-tRNA editing activity	5.54E-04
41	GO:0045330: aspartyl esterase activity	7.58E-04
42	GO:0035250: UDP-galactosyltransferase activity	7.93E-04
43	GO:0030599: pectinesterase activity	9.60E-04
44	GO:0005536: glucose binding	1.05E-03
45	GO:0005253: anion channel activity	1.05E-03
46	GO:0015204: urea transmembrane transporter activity	1.05E-03
47	GO:0004396: hexokinase activity	1.05E-03
48	GO:0001053: plastid sigma factor activity	1.05E-03
49	GO:0019158: mannokinase activity	1.05E-03
50	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	1.05E-03
51	GO:0016987: sigma factor activity	1.05E-03
52	GO:0008725: DNA-3-methyladenine glycosylase activity	1.33E-03
53	GO:0009922: fatty acid elongase activity	1.33E-03
54	GO:0003959: NADPH dehydrogenase activity	1.33E-03
55	GO:0016773: phosphotransferase activity, alcohol group as acceptor	1.33E-03
56	GO:0008519: ammonium transmembrane transporter activity	1.63E-03
57	GO:0005247: voltage-gated chloride channel activity	1.63E-03
58	GO:0015250: water channel activity	1.85E-03
59	GO:0005261: cation channel activity	1.96E-03
60	GO:0004559: alpha-mannosidase activity	1.96E-03
61	GO:0005242: inward rectifier potassium channel activity	1.96E-03
62	GO:0004124: cysteine synthase activity	1.96E-03
63	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	3.04E-03
64	GO:0015112: nitrate transmembrane transporter activity	3.86E-03
65	GO:0005381: iron ion transmembrane transporter activity	3.86E-03
66	GO:0008047: enzyme activator activity	4.29E-03
67	GO:0051287: NAD binding	4.72E-03
68	GO:0000049: tRNA binding	5.20E-03
69	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	5.25E-03
70	GO:0005262: calcium channel activity	5.68E-03
71	GO:0004565: beta-galactosidase activity	5.68E-03
72	GO:0030552: cAMP binding	6.67E-03
73	GO:0030553: cGMP binding	6.67E-03
74	GO:0008146: sulfotransferase activity	6.67E-03
75	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	7.20E-03
76	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	7.20E-03
77	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	7.20E-03
78	GO:0005216: ion channel activity	8.29E-03
79	GO:0022891: substrate-specific transmembrane transporter activity	1.00E-02
80	GO:0003727: single-stranded RNA binding	1.06E-02
81	GO:0015144: carbohydrate transmembrane transporter activity	1.12E-02
82	GO:0004812: aminoacyl-tRNA ligase activity	1.13E-02
83	GO:0030551: cyclic nucleotide binding	1.19E-02
84	GO:0046910: pectinesterase inhibitor activity	1.21E-02
85	GO:0005351: sugar:proton symporter activity	1.26E-02
86	GO:0005355: glucose transmembrane transporter activity	1.32E-02
87	GO:0016762: xyloglucan:xyloglucosyl transferase activity	1.45E-02
88	GO:0048038: quinone binding	1.45E-02
89	GO:0008194: UDP-glycosyltransferase activity	1.45E-02
90	GO:0000156: phosphorelay response regulator activity	1.59E-02
91	GO:0016491: oxidoreductase activity	1.60E-02
92	GO:0016597: amino acid binding	1.81E-02
93	GO:0016168: chlorophyll binding	1.97E-02
94	GO:0016740: transferase activity	2.04E-02
95	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.12E-02
96	GO:0102483: scopolin beta-glucosidase activity	2.12E-02
97	GO:0008236: serine-type peptidase activity	2.20E-02
98	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.26E-02
99	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	2.28E-02
100	GO:0015238: drug transmembrane transporter activity	2.36E-02
101	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.53E-02
102	GO:0003993: acid phosphatase activity	2.79E-02
103	GO:0008422: beta-glucosidase activity	2.87E-02
104	GO:0051539: 4 iron, 4 sulfur cluster binding	2.96E-02
105	GO:0004185: serine-type carboxypeptidase activity	3.23E-02
106	GO:0043621: protein self-association	3.42E-02
107	GO:0015293: symporter activity	3.51E-02
108	GO:0005506: iron ion binding	3.77E-02
109	GO:0003824: catalytic activity	4.30E-02
110	GO:0015171: amino acid transmembrane transporter activity	4.30E-02
111	GO:0005215: transporter activity	4.34E-02
112	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.61E-02
113	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.81E-02
114	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.81E-02

Rank	GO Term	Adjusted P value
1	GO:0044391: ribosomal subunit	0.00E+00
2	GO:0009507: chloroplast	2.99E-15
3	GO:0009570: chloroplast stroma	3.44E-13
4	GO:0009941: chloroplast envelope	2.26E-11
5	GO:0000312: plastid small ribosomal subunit	1.94E-07
6	GO:0009534: chloroplast thylakoid	4.07E-06
7	GO:0009535: chloroplast thylakoid membrane	9.95E-06
8	GO:0009505: plant-type cell wall	5.08E-05
9	GO:0042807: central vacuole	8.05E-05
10	GO:0016020: membrane	1.29E-04
11	GO:0000428: DNA-directed RNA polymerase complex	1.48E-04
12	GO:0009547: plastid ribosome	1.48E-04
13	GO:0043674: columella	1.48E-04
14	GO:0010318: pyrophosphate-dependent phosphofructokinase complex, beta-subunit complex	1.48E-04
15	GO:0009543: chloroplast thylakoid lumen	1.82E-04
16	GO:0005774: vacuolar membrane	2.32E-04
17	GO:0009705: plant-type vacuole membrane	3.10E-04
18	GO:0022627: cytosolic small ribosomal subunit	4.82E-04
19	GO:0009509: chromoplast	5.54E-04
20	GO:0005773: vacuole	7.46E-04
21	GO:0005840: ribosome	7.59E-04
22	GO:0042646: plastid nucleoid	7.93E-04
23	GO:0034707: chloride channel complex	1.63E-03
24	GO:0009295: nucleoid	1.65E-03
25	GO:0005762: mitochondrial large ribosomal subunit	1.96E-03
26	GO:0016363: nuclear matrix	1.96E-03
27	GO:0009533: chloroplast stromal thylakoid	2.30E-03
28	GO:0000326: protein storage vacuole	3.04E-03
29	GO:0009506: plasmodesma	3.06E-03
30	GO:0005618: cell wall	3.44E-03
31	GO:0031969: chloroplast membrane	4.68E-03
32	GO:0009579: thylakoid	4.76E-03
33	GO:0031307: integral component of mitochondrial outer membrane	5.20E-03
34	GO:0000311: plastid large ribosomal subunit	5.20E-03
35	GO:0019013: viral nucleocapsid	5.68E-03
36	GO:0005887: integral component of plasma membrane	1.13E-02
37	GO:0009523: photosystem II	1.39E-02
38	GO:0009536: plastid	1.44E-02
39	GO:0071944: cell periphery	1.59E-02
40	GO:0030529: intracellular ribonucleoprotein complex	1.89E-02
41	GO:0005789: endoplasmic reticulum membrane	2.00E-02
42	GO:0015934: large ribosomal subunit	2.53E-02
43	GO:0031977: thylakoid lumen	3.05E-02
44	GO:0043231: intracellular membrane-bounded organelle	4.04E-02