Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G12860

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090071: negative regulation of ribosome biogenesis0.00E+00
2GO:0015882: L-ascorbic acid transport0.00E+00
3GO:0070125: mitochondrial translational elongation0.00E+00
4GO:0051085: chaperone mediated protein folding requiring cofactor1.81E-07
5GO:0010028: xanthophyll cycle1.48E-05
6GO:2000071: regulation of defense response by callose deposition3.88E-05
7GO:0006457: protein folding4.09E-05
8GO:0006986: response to unfolded protein1.05E-04
9GO:0006221: pyrimidine nucleotide biosynthetic process1.45E-04
10GO:0044205: 'de novo' UMP biosynthetic process1.45E-04
11GO:0042026: protein refolding2.82E-04
12GO:1901259: chloroplast rRNA processing2.82E-04
13GO:0017148: negative regulation of translation2.82E-04
14GO:0009735: response to cytokinin3.24E-04
15GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process3.32E-04
16GO:0009787: regulation of abscisic acid-activated signaling pathway3.84E-04
17GO:0032544: plastid translation4.37E-04
18GO:0098656: anion transmembrane transport4.93E-04
19GO:0031425: chloroplast RNA processing5.49E-04
20GO:0009682: induced systemic resistance6.67E-04
21GO:2000022: regulation of jasmonic acid mediated signaling pathway1.26E-03
22GO:0007005: mitochondrion organization1.26E-03
23GO:0015979: photosynthesis1.47E-03
24GO:0010118: stomatal movement1.57E-03
25GO:0002229: defense response to oomycetes1.89E-03
26GO:0009793: embryo development ending in seed dormancy2.49E-03
27GO:0009627: systemic acquired resistance2.61E-03
28GO:0015995: chlorophyll biosynthetic process2.70E-03
29GO:0008219: cell death2.90E-03
30GO:0009867: jasmonic acid mediated signaling pathway3.40E-03
31GO:0031347: regulation of defense response4.60E-03
32GO:0006414: translational elongation4.91E-03
33GO:0009620: response to fungus5.93E-03
34GO:0042742: defense response to bacterium6.66E-03
35GO:0006413: translational initiation8.79E-03
36GO:0009409: response to cold9.02E-03
37GO:0009658: chloroplast organization1.25E-02
38GO:0048366: leaf development1.41E-02
39GO:0050832: defense response to fungus1.99E-02
40GO:0006397: mRNA processing1.99E-02
41GO:0009738: abscisic acid-activated signaling pathway2.83E-02
42GO:0006412: translation3.49E-02
43GO:0009414: response to water deprivation4.71E-02
RankGO TermAdjusted P value
1GO:0004151: dihydroorotase activity0.00E+00
2GO:0015229: L-ascorbic acid transporter activity0.00E+00
3GO:0051087: chaperone binding1.50E-07
4GO:0016851: magnesium chelatase activity1.81E-07
5GO:0051082: unfolded protein binding1.49E-05
6GO:0000774: adenyl-nucleotide exchange factor activity3.88E-05
7GO:0043023: ribosomal large subunit binding1.05E-04
8GO:0003746: translation elongation factor activity1.63E-04
9GO:0005507: copper ion binding5.68E-04
10GO:0044183: protein binding involved in protein folding6.67E-04
11GO:0000049: tRNA binding7.29E-04
12GO:0005315: inorganic phosphate transmembrane transporter activity7.91E-04
13GO:0008514: organic anion transmembrane transporter activity1.41E-03
14GO:0003729: mRNA binding1.43E-03
15GO:0042803: protein homodimerization activity1.61E-03
16GO:0016887: ATPase activity2.89E-03
17GO:0003743: translation initiation factor activity1.03E-02
18GO:0004601: peroxidase activity1.25E-02
19GO:0003735: structural constituent of ribosome1.33E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast3.45E-24
2GO:0009570: chloroplast stroma1.40E-19
3GO:0009579: thylakoid3.91E-08
4GO:0009941: chloroplast envelope6.59E-08
5GO:0005759: mitochondrial matrix6.53E-07
6GO:0010007: magnesium chelatase complex6.95E-05
7GO:0009535: chloroplast thylakoid membrane3.64E-04
8GO:0009539: photosystem II reaction center4.37E-04
9GO:0009654: photosystem II oxygen evolving complex1.12E-03
10GO:0009536: plastid1.13E-03
11GO:0010319: stromule2.24E-03
12GO:0030529: intracellular ribonucleoprotein complex2.42E-03
13GO:0009706: chloroplast inner membrane6.31E-03
14GO:0005840: ribosome6.98E-03
15GO:0022626: cytosolic ribosome2.81E-02
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Gene type



Gene DE type