GO Enrichment Analysis of Co-expressed Genes with
AT5G11480
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006223: uracil salvage | 0.00E+00 |
| 2 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 3 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 4 | GO:0070272: proton-transporting ATP synthase complex biogenesis | 0.00E+00 |
| 5 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 6 | GO:0031365: N-terminal protein amino acid modification | 2.57E-06 |
| 7 | GO:0009443: pyridoxal 5'-phosphate salvage | 3.50E-05 |
| 8 | GO:0043686: co-translational protein modification | 3.50E-05 |
| 9 | GO:0034337: RNA folding | 3.50E-05 |
| 10 | GO:0006438: valyl-tRNA aminoacylation | 3.50E-05 |
| 11 | GO:0018026: peptidyl-lysine monomethylation | 8.78E-05 |
| 12 | GO:0006568: tryptophan metabolic process | 8.78E-05 |
| 13 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 8.78E-05 |
| 14 | GO:0090391: granum assembly | 1.52E-04 |
| 15 | GO:0051604: protein maturation | 1.52E-04 |
| 16 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.25E-04 |
| 17 | GO:0010027: thylakoid membrane organization | 2.94E-04 |
| 18 | GO:0006021: inositol biosynthetic process | 3.05E-04 |
| 19 | GO:0044206: UMP salvage | 3.05E-04 |
| 20 | GO:0015995: chlorophyll biosynthetic process | 3.47E-04 |
| 21 | GO:0043097: pyrimidine nucleoside salvage | 3.89E-04 |
| 22 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 4.78E-04 |
| 23 | GO:0006206: pyrimidine nucleobase metabolic process | 4.78E-04 |
| 24 | GO:0046855: inositol phosphate dephosphorylation | 4.78E-04 |
| 25 | GO:1901259: chloroplast rRNA processing | 5.70E-04 |
| 26 | GO:0032544: plastid translation | 8.71E-04 |
| 27 | GO:0017004: cytochrome complex assembly | 8.71E-04 |
| 28 | GO:0006783: heme biosynthetic process | 9.78E-04 |
| 29 | GO:0006949: syncytium formation | 1.20E-03 |
| 30 | GO:0006782: protoporphyrinogen IX biosynthetic process | 1.20E-03 |
| 31 | GO:0006415: translational termination | 1.32E-03 |
| 32 | GO:0006790: sulfur compound metabolic process | 1.44E-03 |
| 33 | GO:0010020: chloroplast fission | 1.70E-03 |
| 34 | GO:0019853: L-ascorbic acid biosynthetic process | 1.84E-03 |
| 35 | GO:0046854: phosphatidylinositol phosphorylation | 1.84E-03 |
| 36 | GO:0006457: protein folding | 1.94E-03 |
| 37 | GO:0009116: nucleoside metabolic process | 2.12E-03 |
| 38 | GO:0019953: sexual reproduction | 2.26E-03 |
| 39 | GO:0006418: tRNA aminoacylation for protein translation | 2.26E-03 |
| 40 | GO:0016114: terpenoid biosynthetic process | 2.41E-03 |
| 41 | GO:0016226: iron-sulfur cluster assembly | 2.56E-03 |
| 42 | GO:0009658: chloroplast organization | 2.99E-03 |
| 43 | GO:0000413: protein peptidyl-prolyl isomerization | 3.20E-03 |
| 44 | GO:0080167: response to karrikin | 3.70E-03 |
| 45 | GO:0032502: developmental process | 4.06E-03 |
| 46 | GO:0015979: photosynthesis | 4.21E-03 |
| 47 | GO:0009828: plant-type cell wall loosening | 4.42E-03 |
| 48 | GO:0009664: plant-type cell wall organization | 9.86E-03 |
| 49 | GO:0006508: proteolysis | 1.42E-02 |
| 50 | GO:0009790: embryo development | 1.74E-02 |
| 51 | GO:0016036: cellular response to phosphate starvation | 1.86E-02 |
| 52 | GO:0040008: regulation of growth | 1.89E-02 |
| 53 | GO:0015031: protein transport | 2.49E-02 |
| 54 | GO:0009826: unidimensional cell growth | 2.60E-02 |
| 55 | GO:0045454: cell redox homeostasis | 3.54E-02 |
| 56 | GO:0006869: lipid transport | 3.78E-02 |
| 57 | GO:0032259: methylation | 3.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046408: chlorophyll synthetase activity | 0.00E+00 |
| 2 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 3 | GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity | 0.00E+00 |
| 4 | GO:0004832: valine-tRNA ligase activity | 3.50E-05 |
| 5 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 3.50E-05 |
| 6 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 3.50E-05 |
| 7 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 3.50E-05 |
| 8 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 3.50E-05 |
| 9 | GO:0004853: uroporphyrinogen decarboxylase activity | 3.50E-05 |
| 10 | GO:0042586: peptide deformylase activity | 3.50E-05 |
| 11 | GO:0052832: inositol monophosphate 3-phosphatase activity | 8.78E-05 |
| 12 | GO:0008934: inositol monophosphate 1-phosphatase activity | 8.78E-05 |
| 13 | GO:0052833: inositol monophosphate 4-phosphatase activity | 8.78E-05 |
| 14 | GO:0004751: ribose-5-phosphate isomerase activity | 1.52E-04 |
| 15 | GO:0070402: NADPH binding | 1.52E-04 |
| 16 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.52E-04 |
| 17 | GO:0016149: translation release factor activity, codon specific | 2.25E-04 |
| 18 | GO:0016279: protein-lysine N-methyltransferase activity | 3.05E-04 |
| 19 | GO:0004845: uracil phosphoribosyltransferase activity | 3.05E-04 |
| 20 | GO:0004040: amidase activity | 3.89E-04 |
| 21 | GO:0004849: uridine kinase activity | 5.70E-04 |
| 22 | GO:0051920: peroxiredoxin activity | 5.70E-04 |
| 23 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 5.70E-04 |
| 24 | GO:0008235: metalloexopeptidase activity | 6.66E-04 |
| 25 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.17E-04 |
| 26 | GO:0016209: antioxidant activity | 7.68E-04 |
| 27 | GO:0004033: aldo-keto reductase (NADP) activity | 7.68E-04 |
| 28 | GO:0003747: translation release factor activity | 9.78E-04 |
| 29 | GO:0004177: aminopeptidase activity | 1.32E-03 |
| 30 | GO:0031072: heat shock protein binding | 1.57E-03 |
| 31 | GO:0051536: iron-sulfur cluster binding | 2.12E-03 |
| 32 | GO:0043424: protein histidine kinase binding | 2.26E-03 |
| 33 | GO:0004176: ATP-dependent peptidase activity | 2.41E-03 |
| 34 | GO:0004812: aminoacyl-tRNA ligase activity | 3.03E-03 |
| 35 | GO:0003713: transcription coactivator activity | 3.36E-03 |
| 36 | GO:0008237: metallopeptidase activity | 4.60E-03 |
| 37 | GO:0008236: serine-type peptidase activity | 5.78E-03 |
| 38 | GO:0005198: structural molecule activity | 9.12E-03 |
| 39 | GO:0051082: unfolded protein binding | 1.33E-02 |
| 40 | GO:0019843: rRNA binding | 1.56E-02 |
| 41 | GO:0005525: GTP binding | 1.59E-02 |
| 42 | GO:0005509: calcium ion binding | 1.81E-02 |
| 43 | GO:0042802: identical protein binding | 2.32E-02 |
| 44 | GO:0008168: methyltransferase activity | 2.60E-02 |
| 45 | GO:0004601: peroxidase activity | 2.67E-02 |
| 46 | GO:0008233: peptidase activity | 3.08E-02 |
| 47 | GO:0003924: GTPase activity | 4.11E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 9.25E-25 |
| 2 | GO:0009570: chloroplast stroma | 4.87E-15 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 2.00E-08 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 9.75E-08 |
| 5 | GO:0031977: thylakoid lumen | 5.24E-07 |
| 6 | GO:0009534: chloroplast thylakoid | 1.32E-06 |
| 7 | GO:0009533: chloroplast stromal thylakoid | 8.12E-06 |
| 8 | GO:0009579: thylakoid | 2.30E-05 |
| 9 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 3.50E-05 |
| 10 | GO:0009941: chloroplast envelope | 4.88E-05 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 8.34E-05 |
| 12 | GO:0019898: extrinsic component of membrane | 1.87E-04 |
| 13 | GO:0009526: plastid envelope | 3.05E-04 |
| 14 | GO:0055035: plastid thylakoid membrane | 3.89E-04 |
| 15 | GO:0009536: plastid | 7.83E-04 |
| 16 | GO:0032040: small-subunit processome | 1.44E-03 |
| 17 | GO:0042651: thylakoid membrane | 2.26E-03 |
| 18 | GO:0009532: plastid stroma | 2.41E-03 |
| 19 | GO:0010287: plastoglobule | 1.50E-02 |
| 20 | GO:0046658: anchored component of plasma membrane | 2.39E-02 |
| 21 | GO:0005874: microtubule | 3.04E-02 |
| 22 | GO:0031969: chloroplast membrane | 3.11E-02 |