co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G10740

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046292: formaldehyde metabolic process	0.00E+00
2	GO:0048227: plasma membrane to endosome transport	0.00E+00
3	GO:0006069: ethanol oxidation	0.00E+00
4	GO:0043462: regulation of ATPase activity	0.00E+00
5	GO:0032780: negative regulation of ATPase activity	0.00E+00
6	GO:0006482: protein demethylation	0.00E+00
7	GO:0001676: long-chain fatty acid metabolic process	5.42E-06
8	GO:0007292: female gamete generation	1.08E-04
9	GO:0006805: xenobiotic metabolic process	1.08E-04
10	GO:0080173: male-female gamete recognition during double fertilization	1.08E-04
11	GO:0035266: meristem growth	1.08E-04
12	GO:0019521: D-gluconate metabolic process	2.52E-04
13	GO:0006212: uracil catabolic process	2.52E-04
14	GO:0019374: galactolipid metabolic process	2.52E-04
15	GO:0030010: establishment of cell polarity	2.52E-04
16	GO:0051788: response to misfolded protein	2.52E-04
17	GO:0006101: citrate metabolic process	2.52E-04
18	GO:0019483: beta-alanine biosynthetic process	2.52E-04
19	GO:1902000: homogentisate catabolic process	2.52E-04
20	GO:0019441: tryptophan catabolic process to kynurenine	2.52E-04
21	GO:0090351: seedling development	2.87E-04
22	GO:0051603: proteolysis involved in cellular protein catabolic process	4.05E-04
23	GO:0009072: aromatic amino acid family metabolic process	4.19E-04
24	GO:0060968: regulation of gene silencing	4.19E-04
25	GO:0010359: regulation of anion channel activity	4.19E-04
26	GO:0072334: UDP-galactose transmembrane transport	6.01E-04
27	GO:0006624: vacuolar protein processing	6.01E-04
28	GO:2001289: lipid X metabolic process	6.01E-04
29	GO:1902584: positive regulation of response to water deprivation	7.98E-04
30	GO:0010363: regulation of plant-type hypersensitive response	7.98E-04
31	GO:0032366: intracellular sterol transport	7.98E-04
32	GO:0006878: cellular copper ion homeostasis	7.98E-04
33	GO:0010193: response to ozone	8.59E-04
34	GO:0007264: small GTPase mediated signal transduction	9.14E-04
35	GO:0009651: response to salt stress	9.19E-04
36	GO:0030308: negative regulation of cell growth	1.01E-03
37	GO:0045927: positive regulation of growth	1.01E-03
38	GO:0006090: pyruvate metabolic process	1.01E-03
39	GO:0006097: glyoxylate cycle	1.01E-03
40	GO:0010150: leaf senescence	1.19E-03
41	GO:0048232: male gamete generation	1.23E-03
42	GO:0043248: proteasome assembly	1.23E-03
43	GO:0035435: phosphate ion transmembrane transport	1.23E-03
44	GO:1902456: regulation of stomatal opening	1.23E-03
45	GO:1900425: negative regulation of defense response to bacterium	1.23E-03
46	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.23E-03
47	GO:0006751: glutathione catabolic process	1.23E-03
48	GO:0048827: phyllome development	1.23E-03
49	GO:0006979: response to oxidative stress	1.30E-03
50	GO:0034389: lipid particle organization	1.47E-03
51	GO:0010189: vitamin E biosynthetic process	1.47E-03
52	GO:0080186: developmental vegetative growth	1.73E-03
53	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.73E-03
54	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	1.73E-03
55	GO:0050790: regulation of catalytic activity	1.73E-03
56	GO:0006401: RNA catabolic process	1.73E-03
57	GO:0006499: N-terminal protein myristoylation	1.74E-03
58	GO:0010043: response to zinc ion	1.82E-03
59	GO:0015031: protein transport	1.95E-03
60	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.00E-03
61	GO:0006605: protein targeting	2.00E-03
62	GO:0010078: maintenance of root meristem identity	2.00E-03
63	GO:0006102: isocitrate metabolic process	2.00E-03
64	GO:0006644: phospholipid metabolic process	2.00E-03
65	GO:0009880: embryonic pattern specification	2.28E-03
66	GO:0043562: cellular response to nitrogen levels	2.28E-03
67	GO:0006631: fatty acid metabolic process	2.36E-03
68	GO:0006098: pentose-phosphate shunt	2.57E-03
69	GO:0009821: alkaloid biosynthetic process	2.57E-03
70	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.57E-03
71	GO:0090333: regulation of stomatal closure	2.57E-03
72	GO:0048268: clathrin coat assembly	2.88E-03
73	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.88E-03
74	GO:0042761: very long-chain fatty acid biosynthetic process	2.88E-03
75	GO:0008202: steroid metabolic process	2.88E-03
76	GO:0000103: sulfate assimilation	3.20E-03
77	GO:0043069: negative regulation of programmed cell death	3.20E-03
78	GO:0048829: root cap development	3.20E-03
79	GO:0045454: cell redox homeostasis	3.40E-03
80	GO:0010015: root morphogenesis	3.53E-03
81	GO:0055114: oxidation-reduction process	3.71E-03
82	GO:0009408: response to heat	4.44E-03
83	GO:0009620: response to fungus	4.44E-03
84	GO:0009933: meristem structural organization	4.59E-03
85	GO:0007034: vacuolar transport	4.59E-03
86	GO:0034976: response to endoplasmic reticulum stress	5.35E-03
87	GO:0006071: glycerol metabolic process	5.35E-03
88	GO:0061077: chaperone-mediated protein folding	6.56E-03
89	GO:0030433: ubiquitin-dependent ERAD pathway	6.99E-03
90	GO:0042147: retrograde transport, endosome to Golgi	8.32E-03
91	GO:0042631: cellular response to water deprivation	8.79E-03
92	GO:0010118: stomatal movement	8.79E-03
93	GO:0006508: proteolysis	9.11E-03
94	GO:0071472: cellular response to salt stress	9.26E-03
95	GO:0006662: glycerol ether metabolic process	9.26E-03
96	GO:0009611: response to wounding	9.45E-03
97	GO:0048544: recognition of pollen	9.74E-03
98	GO:0002229: defense response to oomycetes	1.07E-02
99	GO:0046686: response to cadmium ion	1.07E-02
100	GO:0006635: fatty acid beta-oxidation	1.07E-02
101	GO:0010583: response to cyclopentenone	1.12E-02
102	GO:0006914: autophagy	1.23E-02
103	GO:0009826: unidimensional cell growth	1.25E-02
104	GO:0010286: heat acclimation	1.28E-02
105	GO:0006511: ubiquitin-dependent protein catabolic process	1.36E-02
106	GO:0009911: positive regulation of flower development	1.39E-02
107	GO:0009615: response to virus	1.39E-02
108	GO:0009723: response to ethylene	1.51E-02
109	GO:0048573: photoperiodism, flowering	1.56E-02
110	GO:0008219: cell death	1.68E-02
111	GO:0046777: protein autophosphorylation	1.73E-02
112	GO:0010311: lateral root formation	1.74E-02
113	GO:0009407: toxin catabolic process	1.80E-02
114	GO:0048527: lateral root development	1.86E-02
115	GO:0010119: regulation of stomatal movement	1.86E-02
116	GO:0045892: negative regulation of transcription, DNA-templated	1.97E-02
117	GO:0045087: innate immune response	1.99E-02
118	GO:0034599: cellular response to oxidative stress	2.05E-02
119	GO:0006099: tricarboxylic acid cycle	2.05E-02
120	GO:0006897: endocytosis	2.25E-02
121	GO:0042542: response to hydrogen peroxide	2.31E-02
122	GO:0016042: lipid catabolic process	2.32E-02
123	GO:0009751: response to salicylic acid	2.36E-02
124	GO:0051707: response to other organism	2.38E-02
125	GO:0006629: lipid metabolic process	2.39E-02
126	GO:0048364: root development	2.49E-02
127	GO:0009753: response to jasmonic acid	2.56E-02
128	GO:0009636: response to toxic substance	2.59E-02
129	GO:0009965: leaf morphogenesis	2.59E-02
130	GO:0006855: drug transmembrane transport	2.66E-02
131	GO:0009809: lignin biosynthetic process	2.94E-02
132	GO:0009736: cytokinin-activated signaling pathway	2.94E-02
133	GO:0009734: auxin-activated signaling pathway	3.36E-02
134	GO:0048316: seed development	3.39E-02
135	GO:0048367: shoot system development	3.39E-02
136	GO:0009626: plant-type hypersensitive response	3.47E-02
137	GO:0042545: cell wall modification	3.70E-02
138	GO:0009624: response to nematode	3.78E-02
139	GO:0018105: peptidyl-serine phosphorylation	3.86E-02
140	GO:0009058: biosynthetic process	4.61E-02
141	GO:0009790: embryo development	4.95E-02

Rank	GO Term	Adjusted P value
1	GO:0051670: inulinase activity	0.00E+00
2	GO:0004622: lysophospholipase activity	0.00E+00
3	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
4	GO:0003846: 2-acylglycerol O-acyltransferase activity	0.00E+00
5	GO:0050242: pyruvate, phosphate dikinase activity	0.00E+00
6	GO:0016508: long-chain-enoyl-CoA hydratase activity	0.00E+00
7	GO:0051723: protein methylesterase activity	0.00E+00
8	GO:0004157: dihydropyrimidinase activity	0.00E+00
9	GO:0042030: ATPase inhibitor activity	0.00E+00
10	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
11	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
12	GO:0050342: tocopherol O-methyltransferase activity	0.00E+00
13	GO:0004566: beta-glucuronidase activity	6.05E-07
14	GO:0005093: Rab GDP-dissociation inhibitor activity	2.29E-06
15	GO:0102391: decanoate--CoA ligase activity	3.64E-05
16	GO:0004467: long-chain fatty acid-CoA ligase activity	4.92E-05
17	GO:0008692: 3-hydroxybutyryl-CoA epimerase activity	1.08E-04
18	GO:0051669: fructan beta-fructosidase activity	1.08E-04
19	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	1.08E-04
20	GO:0019786: Atg8-specific protease activity	1.08E-04
21	GO:0031219: levanase activity	1.08E-04
22	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.08E-04
23	GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity	1.08E-04
24	GO:0003857: 3-hydroxyacyl-CoA dehydrogenase activity	2.52E-04
25	GO:0019779: Atg8 activating enzyme activity	2.52E-04
26	GO:0004061: arylformamidase activity	2.52E-04
27	GO:0019172: glyoxalase III activity	2.52E-04
28	GO:0008517: folic acid transporter activity	2.52E-04
29	GO:0003994: aconitate hydratase activity	2.52E-04
30	GO:0005047: signal recognition particle binding	4.19E-04
31	GO:0003840: gamma-glutamyltransferase activity	4.19E-04
32	GO:0036374: glutathione hydrolase activity	4.19E-04
33	GO:0016805: dipeptidase activity	4.19E-04
34	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	6.01E-04
35	GO:0004165: dodecenoyl-CoA delta-isomerase activity	6.01E-04
36	GO:0004300: enoyl-CoA hydratase activity	6.01E-04
37	GO:0019776: Atg8 ligase activity	7.98E-04
38	GO:0004301: epoxide hydrolase activity	7.98E-04
39	GO:0004197: cysteine-type endopeptidase activity	9.14E-04
40	GO:0005459: UDP-galactose transmembrane transporter activity	1.01E-03
41	GO:0005496: steroid binding	1.01E-03
42	GO:0036402: proteasome-activating ATPase activity	1.23E-03
43	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.47E-03
44	GO:0004656: procollagen-proline 4-dioxygenase activity	1.47E-03
45	GO:0005096: GTPase activator activity	1.66E-03
46	GO:0008235: metalloexopeptidase activity	1.73E-03
47	GO:0004620: phospholipase activity	1.73E-03
48	GO:0004143: diacylglycerol kinase activity	1.73E-03
49	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.17E-03
50	GO:0003951: NAD+ kinase activity	2.28E-03
51	GO:0008142: oxysterol binding	2.28E-03
52	GO:0008889: glycerophosphodiester phosphodiesterase activity	2.57E-03
53	GO:0047617: acyl-CoA hydrolase activity	2.88E-03
54	GO:0016844: strictosidine synthase activity	2.88E-03
55	GO:0004713: protein tyrosine kinase activity	3.20E-03
56	GO:0005545: 1-phosphatidylinositol binding	3.20E-03
57	GO:0005524: ATP binding	3.45E-03
58	GO:0008794: arsenate reductase (glutaredoxin) activity	3.53E-03
59	GO:0004177: aminopeptidase activity	3.53E-03
60	GO:0008559: xenobiotic-transporting ATPase activity	3.53E-03
61	GO:0008234: cysteine-type peptidase activity	3.79E-03
62	GO:0004022: alcohol dehydrogenase (NAD) activity	4.23E-03
63	GO:0005315: inorganic phosphate transmembrane transporter activity	4.23E-03
64	GO:0031072: heat shock protein binding	4.23E-03
65	GO:0004175: endopeptidase activity	4.59E-03
66	GO:0017025: TBP-class protein binding	4.96E-03
67	GO:0015035: protein disulfide oxidoreductase activity	5.01E-03
68	GO:0005528: FK506 binding	5.75E-03
69	GO:0031418: L-ascorbic acid binding	5.75E-03
70	GO:0004298: threonine-type endopeptidase activity	6.56E-03
71	GO:0016887: ATPase activity	7.73E-03
72	GO:0003756: protein disulfide isomerase activity	7.87E-03
73	GO:0047134: protein-disulfide reductase activity	8.32E-03
74	GO:0030276: clathrin binding	9.26E-03
75	GO:0016853: isomerase activity	9.74E-03
76	GO:0004791: thioredoxin-disulfide reductase activity	9.74E-03
77	GO:0004518: nuclease activity	1.12E-02
78	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.18E-02
79	GO:0008483: transaminase activity	1.28E-02
80	GO:0030246: carbohydrate binding	1.34E-02
81	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.51E-02
82	GO:0004683: calmodulin-dependent protein kinase activity	1.56E-02
83	GO:0016787: hydrolase activity	1.73E-02
84	GO:0030145: manganese ion binding	1.86E-02
85	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.99E-02
86	GO:0051539: 4 iron, 4 sulfur cluster binding	2.18E-02
87	GO:0004364: glutathione transferase activity	2.31E-02
88	GO:0003924: GTPase activity	2.39E-02
89	GO:0005215: transporter activity	2.55E-02
90	GO:0009055: electron carrier activity	2.56E-02
91	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.66E-02
92	GO:0016301: kinase activity	2.89E-02
93	GO:0016298: lipase activity	3.02E-02
94	GO:0016491: oxidoreductase activity	3.17E-02
95	GO:0045330: aspartyl esterase activity	3.17E-02
96	GO:0005515: protein binding	3.55E-02
97	GO:0030599: pectinesterase activity	3.63E-02
98	GO:0051082: unfolded protein binding	3.78E-02
99	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0019822: P4 peroxisome	0.00E+00
3	GO:0005783: endoplasmic reticulum	7.81E-07
4	GO:0005618: cell wall	2.41E-06
5	GO:0005773: vacuole	9.10E-06
6	GO:0005829: cytosol	1.56E-05
7	GO:0009514: glyoxysome	8.11E-05
8	GO:0005765: lysosomal membrane	1.69E-04
9	GO:0000502: proteasome complex	3.88E-04
10	GO:0046861: glyoxysomal membrane	4.19E-04
11	GO:0030139: endocytic vesicle	4.19E-04
12	GO:0005777: peroxisome	4.75E-04
13	GO:0000323: lytic vacuole	6.01E-04
14	GO:0005775: vacuolar lumen	6.01E-04
15	GO:0005776: autophagosome	7.98E-04
16	GO:0005774: vacuolar membrane	9.85E-04
17	GO:0030904: retromer complex	1.23E-03
18	GO:0031597: cytosolic proteasome complex	1.47E-03
19	GO:0030173: integral component of Golgi membrane	1.47E-03
20	GO:0005886: plasma membrane	1.65E-03
21	GO:0031595: nuclear proteasome complex	1.73E-03
22	GO:0000421: autophagosome membrane	2.00E-03
23	GO:0005794: Golgi apparatus	2.07E-03
24	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	2.28E-03
25	GO:0005811: lipid particle	2.28E-03
26	GO:0031902: late endosome membrane	2.36E-03
27	GO:0008540: proteasome regulatory particle, base subcomplex	2.88E-03
28	GO:0016602: CCAAT-binding factor complex	4.23E-03
29	GO:0005764: lysosome	4.59E-03
30	GO:0030176: integral component of endoplasmic reticulum membrane	4.96E-03
31	GO:0005623: cell	6.24E-03
32	GO:0005839: proteasome core complex	6.56E-03
33	GO:0005905: clathrin-coated pit	6.56E-03
34	GO:0031410: cytoplasmic vesicle	6.99E-03
35	GO:0030136: clathrin-coated vesicle	8.32E-03
36	GO:0019898: extrinsic component of membrane	1.02E-02
37	GO:0071944: cell periphery	1.18E-02
38	GO:0005788: endoplasmic reticulum lumen	1.45E-02
39	GO:0009506: plasmodesma	1.77E-02
40	GO:0000325: plant-type vacuole	1.86E-02
41	GO:0009570: chloroplast stroma	3.31E-02
42	GO:0010008: endosome membrane	3.39E-02
43	GO:0012505: endomembrane system	3.70E-02
44	GO:0005730: nucleolus	4.31E-02