GO Enrichment Analysis of Co-expressed Genes with
AT5G10540
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 2 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 3 | GO:0043266: regulation of potassium ion transport | 6.42E-05 |
| 4 | GO:0000481: maturation of 5S rRNA | 6.42E-05 |
| 5 | GO:2000021: regulation of ion homeostasis | 6.42E-05 |
| 6 | GO:0010028: xanthophyll cycle | 6.42E-05 |
| 7 | GO:0034337: RNA folding | 6.42E-05 |
| 8 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 6.42E-05 |
| 9 | GO:1900871: chloroplast mRNA modification | 1.55E-04 |
| 10 | GO:0016122: xanthophyll metabolic process | 1.55E-04 |
| 11 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 1.55E-04 |
| 12 | GO:0045493: xylan catabolic process | 2.63E-04 |
| 13 | GO:2001295: malonyl-CoA biosynthetic process | 2.63E-04 |
| 14 | GO:0009226: nucleotide-sugar biosynthetic process | 3.82E-04 |
| 15 | GO:0015994: chlorophyll metabolic process | 5.10E-04 |
| 16 | GO:0000304: response to singlet oxygen | 6.45E-04 |
| 17 | GO:0006796: phosphate-containing compound metabolic process | 7.90E-04 |
| 18 | GO:0010190: cytochrome b6f complex assembly | 7.90E-04 |
| 19 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 7.90E-04 |
| 20 | GO:0006751: glutathione catabolic process | 7.90E-04 |
| 21 | GO:0042549: photosystem II stabilization | 7.90E-04 |
| 22 | GO:0000470: maturation of LSU-rRNA | 7.90E-04 |
| 23 | GO:0016554: cytidine to uridine editing | 7.90E-04 |
| 24 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.40E-04 |
| 25 | GO:0032508: DNA duplex unwinding | 1.26E-03 |
| 26 | GO:0010206: photosystem II repair | 1.62E-03 |
| 27 | GO:1900865: chloroplast RNA modification | 1.81E-03 |
| 28 | GO:0009073: aromatic amino acid family biosynthetic process | 2.21E-03 |
| 29 | GO:0009767: photosynthetic electron transport chain | 2.64E-03 |
| 30 | GO:0042744: hydrogen peroxide catabolic process | 3.47E-03 |
| 31 | GO:0006633: fatty acid biosynthetic process | 3.82E-03 |
| 32 | GO:0016575: histone deacetylation | 3.82E-03 |
| 33 | GO:0031408: oxylipin biosynthetic process | 4.08E-03 |
| 34 | GO:0048868: pollen tube development | 5.72E-03 |
| 35 | GO:0009658: chloroplast organization | 6.48E-03 |
| 36 | GO:0000302: response to reactive oxygen species | 6.61E-03 |
| 37 | GO:0002229: defense response to oomycetes | 6.61E-03 |
| 38 | GO:0030163: protein catabolic process | 7.24E-03 |
| 39 | GO:0071805: potassium ion transmembrane transport | 7.88E-03 |
| 40 | GO:0010027: thylakoid membrane organization | 8.54E-03 |
| 41 | GO:0010411: xyloglucan metabolic process | 9.57E-03 |
| 42 | GO:0015995: chlorophyll biosynthetic process | 9.57E-03 |
| 43 | GO:0034599: cellular response to oxidative stress | 1.25E-02 |
| 44 | GO:0030001: metal ion transport | 1.33E-02 |
| 45 | GO:0009409: response to cold | 1.36E-02 |
| 46 | GO:0006631: fatty acid metabolic process | 1.37E-02 |
| 47 | GO:0005975: carbohydrate metabolic process | 1.58E-02 |
| 48 | GO:0006855: drug transmembrane transport | 1.62E-02 |
| 49 | GO:0042538: hyperosmotic salinity response | 1.71E-02 |
| 50 | GO:0006813: potassium ion transport | 1.80E-02 |
| 51 | GO:0006096: glycolytic process | 2.02E-02 |
| 52 | GO:0009742: brassinosteroid mediated signaling pathway | 2.41E-02 |
| 53 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.69E-02 |
| 54 | GO:0071555: cell wall organization | 4.27E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 2 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 3 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 4 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 5 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 6 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 7 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 8 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.55E-04 |
| 9 | GO:0004802: transketolase activity | 1.55E-04 |
| 10 | GO:0003839: gamma-glutamylcyclotransferase activity | 1.55E-04 |
| 11 | GO:0005528: FK506 binding | 1.75E-04 |
| 12 | GO:0004075: biotin carboxylase activity | 2.63E-04 |
| 13 | GO:0030267: glyoxylate reductase (NADP) activity | 2.63E-04 |
| 14 | GO:0048487: beta-tubulin binding | 3.82E-04 |
| 15 | GO:0009044: xylan 1,4-beta-xylosidase activity | 5.10E-04 |
| 16 | GO:0046556: alpha-L-arabinofuranosidase activity | 5.10E-04 |
| 17 | GO:0016836: hydro-lyase activity | 5.10E-04 |
| 18 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 5.10E-04 |
| 19 | GO:0003989: acetyl-CoA carboxylase activity | 6.45E-04 |
| 20 | GO:0004130: cytochrome-c peroxidase activity | 7.90E-04 |
| 21 | GO:0042578: phosphoric ester hydrolase activity | 7.90E-04 |
| 22 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 9.40E-04 |
| 23 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 9.40E-04 |
| 24 | GO:0004427: inorganic diphosphatase activity | 1.10E-03 |
| 25 | GO:0004033: aldo-keto reductase (NADP) activity | 1.26E-03 |
| 26 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.44E-03 |
| 27 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.51E-03 |
| 28 | GO:0004565: beta-galactosidase activity | 2.64E-03 |
| 29 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 2.87E-03 |
| 30 | GO:0019843: rRNA binding | 3.06E-03 |
| 31 | GO:0004252: serine-type endopeptidase activity | 3.39E-03 |
| 32 | GO:0004407: histone deacetylase activity | 3.57E-03 |
| 33 | GO:0015079: potassium ion transmembrane transporter activity | 3.82E-03 |
| 34 | GO:0004601: peroxidase activity | 6.48E-03 |
| 35 | GO:0005509: calcium ion binding | 8.37E-03 |
| 36 | GO:0052689: carboxylic ester hydrolase activity | 8.88E-03 |
| 37 | GO:0008236: serine-type peptidase activity | 9.93E-03 |
| 38 | GO:0015238: drug transmembrane transporter activity | 1.07E-02 |
| 39 | GO:0043621: protein self-association | 1.54E-02 |
| 40 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.79E-02 |
| 41 | GO:0015297: antiporter activity | 3.30E-02 |
| 42 | GO:0003723: RNA binding | 4.12E-02 |
| 43 | GO:0008168: methyltransferase activity | 4.52E-02 |
| 44 | GO:0000287: magnesium ion binding | 4.58E-02 |
| 45 | GO:0016788: hydrolase activity, acting on ester bonds | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 1.09E-18 |
| 2 | GO:0009543: chloroplast thylakoid lumen | 8.17E-12 |
| 3 | GO:0031977: thylakoid lumen | 1.22E-11 |
| 4 | GO:0009570: chloroplast stroma | 6.79E-10 |
| 5 | GO:0009534: chloroplast thylakoid | 2.25E-09 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 3.66E-09 |
| 7 | GO:0009941: chloroplast envelope | 1.59E-07 |
| 8 | GO:0009579: thylakoid | 8.97E-07 |
| 9 | GO:0009344: nitrite reductase complex [NAD(P)H] | 6.42E-05 |
| 10 | GO:0030095: chloroplast photosystem II | 1.23E-04 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 1.95E-04 |
| 12 | GO:0019898: extrinsic component of membrane | 4.13E-04 |
| 13 | GO:0009533: chloroplast stromal thylakoid | 1.10E-03 |
| 14 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.62E-03 |
| 15 | GO:0032040: small-subunit processome | 2.42E-03 |
| 16 | GO:0000312: plastid small ribosomal subunit | 2.87E-03 |
| 17 | GO:0043234: protein complex | 3.33E-03 |
| 18 | GO:0009706: chloroplast inner membrane | 2.31E-02 |
| 19 | GO:0016020: membrane | 3.13E-02 |
| 20 | GO:0009705: plant-type vacuole membrane | 3.41E-02 |
| 21 | GO:0046658: anchored component of plasma membrane | 4.16E-02 |
| 22 | GO:0022627: cytosolic small ribosomal subunit | 4.16E-02 |
| 23 | GO:0048046: apoplast | 4.67E-02 |