GO Enrichment Analysis of Co-expressed Genes with
AT5G08740
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 2 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 3 | GO:0009773: photosynthetic electron transport in photosystem I | 1.60E-07 |
| 4 | GO:0015994: chlorophyll metabolic process | 1.16E-06 |
| 5 | GO:0000305: response to oxygen radical | 3.00E-05 |
| 6 | GO:0043953: protein transport by the Tat complex | 3.00E-05 |
| 7 | GO:0000481: maturation of 5S rRNA | 3.00E-05 |
| 8 | GO:0065002: intracellular protein transmembrane transport | 3.00E-05 |
| 9 | GO:0010028: xanthophyll cycle | 3.00E-05 |
| 10 | GO:0034337: RNA folding | 3.00E-05 |
| 11 | GO:1900871: chloroplast mRNA modification | 7.58E-05 |
| 12 | GO:0016122: xanthophyll metabolic process | 7.58E-05 |
| 13 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.97E-04 |
| 14 | GO:0045727: positive regulation of translation | 2.67E-04 |
| 15 | GO:0006749: glutathione metabolic process | 2.67E-04 |
| 16 | GO:0006461: protein complex assembly | 3.42E-04 |
| 17 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 4.20E-04 |
| 18 | GO:0009854: oxidative photosynthetic carbon pathway | 5.02E-04 |
| 19 | GO:0048564: photosystem I assembly | 6.76E-04 |
| 20 | GO:0032508: DNA duplex unwinding | 6.76E-04 |
| 21 | GO:0010492: maintenance of shoot apical meristem identity | 6.76E-04 |
| 22 | GO:0006364: rRNA processing | 6.82E-04 |
| 23 | GO:0006810: transport | 7.59E-04 |
| 24 | GO:0071482: cellular response to light stimulus | 7.68E-04 |
| 25 | GO:0009657: plastid organization | 7.68E-04 |
| 26 | GO:0032544: plastid translation | 7.68E-04 |
| 27 | GO:0055114: oxidation-reduction process | 7.77E-04 |
| 28 | GO:0048507: meristem development | 8.63E-04 |
| 29 | GO:0010206: photosystem II repair | 8.63E-04 |
| 30 | GO:0010205: photoinhibition | 9.61E-04 |
| 31 | GO:0009735: response to cytokinin | 9.86E-04 |
| 32 | GO:0005983: starch catabolic process | 1.27E-03 |
| 33 | GO:0018107: peptidyl-threonine phosphorylation | 1.38E-03 |
| 34 | GO:0009767: photosynthetic electron transport chain | 1.38E-03 |
| 35 | GO:0010207: photosystem II assembly | 1.50E-03 |
| 36 | GO:0016575: histone deacetylation | 1.98E-03 |
| 37 | GO:0061077: chaperone-mediated protein folding | 2.11E-03 |
| 38 | GO:0042631: cellular response to water deprivation | 2.80E-03 |
| 39 | GO:0015979: photosynthesis | 3.47E-03 |
| 40 | GO:0045454: cell redox homeostasis | 3.63E-03 |
| 41 | GO:0030163: protein catabolic process | 3.71E-03 |
| 42 | GO:0009567: double fertilization forming a zygote and endosperm | 3.87E-03 |
| 43 | GO:0010027: thylakoid membrane organization | 4.36E-03 |
| 44 | GO:0009853: photorespiration | 6.16E-03 |
| 45 | GO:0006631: fatty acid metabolic process | 6.94E-03 |
| 46 | GO:0018105: peptidyl-serine phosphorylation | 1.18E-02 |
| 47 | GO:0006470: protein dephosphorylation | 1.87E-02 |
| 48 | GO:0009409: response to cold | 2.18E-02 |
| 49 | GO:0042254: ribosome biogenesis | 2.36E-02 |
| 50 | GO:0046686: response to cadmium ion | 2.51E-02 |
| 51 | GO:0007275: multicellular organism development | 3.17E-02 |
| 52 | GO:0009737: response to abscisic acid | 3.43E-02 |
| 53 | GO:0032259: methylation | 3.47E-02 |
| 54 | GO:0016042: lipid catabolic process | 3.50E-02 |
| 55 | GO:0009408: response to heat | 3.58E-02 |
| 56 | GO:0008152: metabolic process | 3.83E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 2 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 3 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 4 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 5 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 6 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 7 | GO:0050308: sugar-phosphatase activity | 3.00E-05 |
| 8 | GO:0019203: carbohydrate phosphatase activity | 3.00E-05 |
| 9 | GO:0008266: poly(U) RNA binding | 4.04E-05 |
| 10 | GO:0005528: FK506 binding | 5.95E-05 |
| 11 | GO:0004362: glutathione-disulfide reductase activity | 7.58E-05 |
| 12 | GO:0047746: chlorophyllase activity | 7.58E-05 |
| 13 | GO:0016868: intramolecular transferase activity, phosphotransferases | 7.58E-05 |
| 14 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 7.58E-05 |
| 15 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.32E-04 |
| 16 | GO:0019201: nucleotide kinase activity | 1.97E-04 |
| 17 | GO:0048487: beta-tubulin binding | 1.97E-04 |
| 18 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.67E-04 |
| 19 | GO:0050660: flavin adenine dinucleotide binding | 3.01E-04 |
| 20 | GO:2001070: starch binding | 4.20E-04 |
| 21 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 5.02E-04 |
| 22 | GO:0004017: adenylate kinase activity | 5.02E-04 |
| 23 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.94E-04 |
| 24 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 7.68E-04 |
| 25 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 8.63E-04 |
| 26 | GO:0004407: histone deacetylase activity | 1.86E-03 |
| 27 | GO:0004176: ATP-dependent peptidase activity | 2.11E-03 |
| 28 | GO:0050662: coenzyme binding | 3.09E-03 |
| 29 | GO:0048038: quinone binding | 3.40E-03 |
| 30 | GO:0008237: metallopeptidase activity | 4.03E-03 |
| 31 | GO:0004222: metalloendopeptidase activity | 5.60E-03 |
| 32 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 5.78E-03 |
| 33 | GO:0050897: cobalt ion binding | 5.78E-03 |
| 34 | GO:0003746: translation elongation factor activity | 6.16E-03 |
| 35 | GO:0050661: NADP binding | 6.74E-03 |
| 36 | GO:0043621: protein self-association | 7.75E-03 |
| 37 | GO:0051287: NAD binding | 8.38E-03 |
| 38 | GO:0003723: RNA binding | 9.43E-03 |
| 39 | GO:0016874: ligase activity | 1.11E-02 |
| 40 | GO:0005507: copper ion binding | 1.13E-02 |
| 41 | GO:0019843: rRNA binding | 1.36E-02 |
| 42 | GO:0003743: translation initiation factor activity | 1.90E-02 |
| 43 | GO:0042802: identical protein binding | 2.02E-02 |
| 44 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.02E-02 |
| 45 | GO:0016491: oxidoreductase activity | 2.12E-02 |
| 46 | GO:0005524: ATP binding | 2.21E-02 |
| 47 | GO:0008168: methyltransferase activity | 2.26E-02 |
| 48 | GO:0016788: hydrolase activity, acting on ester bonds | 2.36E-02 |
| 49 | GO:0003729: mRNA binding | 2.40E-02 |
| 50 | GO:0052689: carboxylic ester hydrolase activity | 2.91E-02 |
| 51 | GO:0016787: hydrolase activity | 3.45E-02 |
| 52 | GO:0009055: electron carrier activity | 3.76E-02 |
| 53 | GO:0016887: ATPase activity | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.07E-23 |
| 3 | GO:0009534: chloroplast thylakoid | 1.79E-16 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 1.34E-11 |
| 5 | GO:0009579: thylakoid | 2.53E-08 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 5.64E-08 |
| 7 | GO:0030095: chloroplast photosystem II | 3.34E-07 |
| 8 | GO:0009941: chloroplast envelope | 2.59E-06 |
| 9 | GO:0009570: chloroplast stroma | 8.54E-06 |
| 10 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.39E-05 |
| 11 | GO:0009344: nitrite reductase complex [NAD(P)H] | 3.00E-05 |
| 12 | GO:0031361: integral component of thylakoid membrane | 3.00E-05 |
| 13 | GO:0033281: TAT protein transport complex | 1.32E-04 |
| 14 | GO:0031977: thylakoid lumen | 4.74E-04 |
| 15 | GO:0009533: chloroplast stromal thylakoid | 5.88E-04 |
| 16 | GO:0048046: apoplast | 6.19E-04 |
| 17 | GO:0010287: plastoglobule | 1.12E-03 |
| 18 | GO:0032040: small-subunit processome | 1.27E-03 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 1.98E-03 |
| 20 | GO:0042651: thylakoid membrane | 1.98E-03 |
| 21 | GO:0009523: photosystem II | 3.24E-03 |
| 22 | GO:0019898: extrinsic component of membrane | 3.24E-03 |
| 23 | GO:0005747: mitochondrial respiratory chain complex I | 1.04E-02 |
| 24 | GO:0005759: mitochondrial matrix | 1.59E-02 |