co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G08690

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045047: protein targeting to ER	0.00E+00
2	GO:0071731: response to nitric oxide	0.00E+00
3	GO:0031564: transcription antitermination	0.00E+00
4	GO:0019307: mannose biosynthetic process	0.00E+00
5	GO:0009651: response to salt stress	1.23E-08
6	GO:0046686: response to cadmium ion	6.06E-07
7	GO:0006412: translation	1.37E-06
8	GO:0042254: ribosome biogenesis	1.84E-06
9	GO:0000494: box C/D snoRNA 3'-end processing	1.39E-05
10	GO:1990258: histone glutamine methylation	1.39E-05
11	GO:0051775: response to redox state	1.39E-05
12	GO:0000027: ribosomal large subunit assembly	1.91E-05
13	GO:0007005: mitochondrion organization	2.72E-05
14	GO:0045041: protein import into mitochondrial intermembrane space	3.65E-05
15	GO:0015865: purine nucleotide transport	3.65E-05
16	GO:0006013: mannose metabolic process	6.55E-05
17	GO:1902626: assembly of large subunit precursor of preribosome	6.55E-05
18	GO:0009298: GDP-mannose biosynthetic process	9.94E-05
19	GO:0046902: regulation of mitochondrial membrane permeability	9.94E-05
20	GO:0051131: chaperone-mediated protein complex assembly	9.94E-05
21	GO:0006536: glutamate metabolic process	1.37E-04
22	GO:0000460: maturation of 5.8S rRNA	1.37E-04
23	GO:0009409: response to cold	1.38E-04
24	GO:0031167: rRNA methylation	1.78E-04
25	GO:0000470: maturation of LSU-rRNA	2.22E-04
26	GO:0042026: protein refolding	2.68E-04
27	GO:0006458: 'de novo' protein folding	2.68E-04
28	GO:0006096: glycolytic process	3.17E-04
29	GO:0009793: embryo development ending in seed dormancy	3.36E-04
30	GO:0001510: RNA methylation	4.16E-04
31	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.93E-04
32	GO:0006094: gluconeogenesis	7.52E-04
33	GO:0048467: gynoecium development	8.13E-04
34	GO:0007030: Golgi organization	8.75E-04
35	GO:0019853: L-ascorbic acid biosynthetic process	8.75E-04
36	GO:0006487: protein N-linked glycosylation	1.00E-03
37	GO:0061077: chaperone-mediated protein folding	1.13E-03
38	GO:0008033: tRNA processing	1.49E-03
39	GO:0015991: ATP hydrolysis coupled proton transport	1.49E-03
40	GO:0010154: fruit development	1.56E-03
41	GO:0015986: ATP synthesis coupled proton transport	1.64E-03
42	GO:0009408: response to heat	1.75E-03
43	GO:0016049: cell growth	2.66E-03
44	GO:0009735: response to cytokinin	2.80E-03
45	GO:0009832: plant-type cell wall biogenesis	2.84E-03
46	GO:0010043: response to zinc ion	3.03E-03
47	GO:0009631: cold acclimation	3.03E-03
48	GO:0048527: lateral root development	3.03E-03
49	GO:0006839: mitochondrial transport	3.52E-03
50	GO:0042542: response to hydrogen peroxide	3.73E-03
51	GO:0009744: response to sucrose	3.83E-03
52	GO:0006414: translational elongation	4.54E-03
53	GO:0006364: rRNA processing	4.69E-03
54	GO:0048316: seed development	5.38E-03
55	GO:0009845: seed germination	7.38E-03
56	GO:0006633: fatty acid biosynthetic process	8.19E-03
57	GO:0006810: transport	9.04E-03
58	GO:0006970: response to osmotic stress	1.25E-02
59	GO:0009723: response to ethylene	1.32E-02
60	GO:0009734: auxin-activated signaling pathway	2.33E-02
61	GO:0009416: response to light stimulus	2.74E-02
62	GO:0051301: cell division	2.92E-02
63	GO:0055085: transmembrane transport	3.25E-02
64	GO:0009414: response to water deprivation	4.46E-02
65	GO:0042742: defense response to bacterium	4.54E-02
66	GO:0006979: response to oxidative stress	4.56E-02
67	GO:0009733: response to auxin	4.93E-02

Rank	GO Term	Adjusted P value
1	GO:0004615: phosphomannomutase activity	0.00E+00
2	GO:0004316: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity	0.00E+00
3	GO:0001072: transcription antitermination factor activity, RNA binding	0.00E+00
4	GO:0102132: 3-oxo-pimeloyl-[acp] methyl ester reductase activity	0.00E+00
5	GO:0005507: copper ion binding	1.18E-09
6	GO:0003735: structural constituent of ribosome	4.87E-08
7	GO:1990259: histone-glutamine methyltransferase activity	1.39E-05
8	GO:0042134: rRNA primary transcript binding	1.39E-05
9	GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity	1.39E-05
10	GO:0004634: phosphopyruvate hydratase activity	3.65E-05
11	GO:0070180: large ribosomal subunit rRNA binding	6.55E-05
12	GO:0008649: rRNA methyltransferase activity	6.55E-05
13	GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity	9.94E-05
14	GO:0004351: glutamate decarboxylase activity	9.94E-05
15	GO:0003746: translation elongation factor activity	1.50E-04
16	GO:0005471: ATP:ADP antiporter activity	1.78E-04
17	GO:0051287: NAD binding	2.40E-04
18	GO:0030515: snoRNA binding	3.15E-04
19	GO:0044183: protein binding involved in protein folding	6.34E-04
20	GO:0046961: proton-transporting ATPase activity, rotational mechanism	6.34E-04
21	GO:0015114: phosphate ion transmembrane transporter activity	7.52E-04
22	GO:0003729: mRNA binding	1.29E-03
23	GO:0003924: GTPase activity	1.75E-03
24	GO:0003723: RNA binding	2.12E-03
25	GO:0050897: cobalt ion binding	3.03E-03
26	GO:0003697: single-stranded DNA binding	3.22E-03
27	GO:0050661: NADP binding	3.52E-03
28	GO:0005198: structural molecule activity	4.15E-03
29	GO:0005516: calmodulin binding	4.58E-03
30	GO:0003690: double-stranded DNA binding	4.81E-03
31	GO:0051082: unfolded protein binding	5.98E-03
32	GO:0030170: pyridoxal phosphate binding	7.51E-03
33	GO:0008565: protein transporter activity	7.91E-03
34	GO:0000287: magnesium ion binding	1.17E-02
35	GO:0005525: GTP binding	3.91E-02

Rank	GO Term	Adjusted P value
1	GO:0005730: nucleolus	1.93E-11
2	GO:0005740: mitochondrial envelope	2.07E-08
3	GO:0005840: ribosome	1.79E-07
4	GO:0005774: vacuolar membrane	3.39E-07
5	GO:0022626: cytosolic ribosome	6.39E-07
6	GO:0022625: cytosolic large ribosomal subunit	3.15E-06
7	GO:0033178: proton-transporting two-sector ATPase complex, catalytic domain	3.65E-05
8	GO:0000015: phosphopyruvate hydratase complex	3.65E-05
9	GO:0016020: membrane	2.22E-04
10	GO:0031428: box C/D snoRNP complex	2.22E-04
11	GO:0005829: cytosol	2.89E-04
12	GO:0030687: preribosome, large subunit precursor	3.15E-04
13	GO:0015030: Cajal body	5.23E-04
14	GO:0032040: small-subunit processome	6.93E-04
15	GO:0022627: cytosolic small ribosomal subunit	8.45E-04
16	GO:0005753: mitochondrial proton-transporting ATP synthase complex	8.75E-04
17	GO:0009506: plasmodesma	1.03E-03
18	GO:0005741: mitochondrial outer membrane	1.13E-03
19	GO:0005773: vacuole	1.19E-03
20	GO:0005739: mitochondrion	1.47E-03
21	GO:0005743: mitochondrial inner membrane	1.63E-03
22	GO:0009507: chloroplast	2.65E-03
23	GO:0000325: plant-type vacuole	3.03E-03
24	GO:0048046: apoplast	3.99E-03
25	GO:0005618: cell wall	4.45E-03
26	GO:0005886: plasma membrane	4.47E-03
27	GO:0005747: mitochondrial respiratory chain complex I	5.38E-03
28	GO:0005759: mitochondrial matrix	8.19E-03
29	GO:0005737: cytoplasm	8.66E-03
30	GO:0009705: plant-type vacuole membrane	8.74E-03
31	GO:0009941: chloroplast envelope	2.91E-02