Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G07960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002376: immune system process0.00E+00
2GO:0010360: negative regulation of anion channel activity0.00E+00
3GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
4GO:1901017: negative regulation of potassium ion transmembrane transporter activity0.00E+00
5GO:0006099: tricarboxylic acid cycle2.84E-09
6GO:0006102: isocitrate metabolic process4.21E-07
7GO:0006101: citrate metabolic process4.47E-07
8GO:0046686: response to cadmium ion1.14E-05
9GO:0006097: glyoxylate cycle1.28E-05
10GO:0045454: cell redox homeostasis4.70E-05
11GO:1901183: positive regulation of camalexin biosynthetic process9.14E-05
12GO:1990641: response to iron ion starvation9.14E-05
13GO:1902361: mitochondrial pyruvate transmembrane transport9.14E-05
14GO:0006979: response to oxidative stress1.73E-04
15GO:0006850: mitochondrial pyruvate transport2.16E-04
16GO:0007154: cell communication2.16E-04
17GO:0019441: tryptophan catabolic process to kynurenine2.16E-04
18GO:0051262: protein tetramerization2.16E-04
19GO:0010498: proteasomal protein catabolic process3.61E-04
20GO:0006511: ubiquitin-dependent protein catabolic process4.26E-04
21GO:0010255: glucose mediated signaling pathway5.20E-04
22GO:0080037: negative regulation of cytokinin-activated signaling pathway6.90E-04
23GO:0070534: protein K63-linked ubiquitination6.90E-04
24GO:1902584: positive regulation of response to water deprivation6.90E-04
25GO:0009697: salicylic acid biosynthetic process8.73E-04
26GO:2000762: regulation of phenylpropanoid metabolic process8.73E-04
27GO:0006564: L-serine biosynthetic process8.73E-04
28GO:0007029: endoplasmic reticulum organization8.73E-04
29GO:0006465: signal peptide processing8.73E-04
30GO:0045927: positive regulation of growth8.73E-04
31GO:0035435: phosphate ion transmembrane transport1.07E-03
32GO:0006014: D-ribose metabolic process1.07E-03
33GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.07E-03
34GO:0006301: postreplication repair1.07E-03
35GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation1.07E-03
36GO:0015977: carbon fixation1.27E-03
37GO:0034389: lipid particle organization1.27E-03
38GO:0010043: response to zinc ion1.46E-03
39GO:0080186: developmental vegetative growth1.49E-03
40GO:0030162: regulation of proteolysis1.72E-03
41GO:2000070: regulation of response to water deprivation1.72E-03
42GO:0010120: camalexin biosynthetic process1.96E-03
43GO:0030968: endoplasmic reticulum unfolded protein response1.96E-03
44GO:0009657: plastid organization1.96E-03
45GO:0043069: negative regulation of programmed cell death2.75E-03
46GO:0009809: lignin biosynthetic process2.75E-03
47GO:0009807: lignan biosynthetic process3.03E-03
48GO:0006629: lipid metabolic process3.33E-03
49GO:0009266: response to temperature stimulus3.93E-03
50GO:0010039: response to iron ion4.26E-03
51GO:0090351: seedling development4.26E-03
52GO:0010053: root epidermal cell differentiation4.26E-03
53GO:0006071: glycerol metabolic process4.58E-03
54GO:0030433: ubiquitin-dependent ERAD pathway5.98E-03
55GO:0031348: negative regulation of defense response5.98E-03
56GO:0006012: galactose metabolic process6.35E-03
57GO:0019722: calcium-mediated signaling6.73E-03
58GO:0009555: pollen development6.89E-03
59GO:0016117: carotenoid biosynthetic process7.11E-03
60GO:0009651: response to salt stress7.14E-03
61GO:0006662: glycerol ether metabolic process7.91E-03
62GO:0019252: starch biosynthetic process8.74E-03
63GO:0007264: small GTPase mediated signal transduction9.60E-03
64GO:0006464: cellular protein modification process1.05E-02
65GO:0010252: auxin homeostasis1.05E-02
66GO:0055114: oxidation-reduction process1.15E-02
67GO:0009607: response to biotic stimulus1.23E-02
68GO:0008219: cell death1.43E-02
69GO:0006499: N-terminal protein myristoylation1.54E-02
70GO:0045087: innate immune response1.69E-02
71GO:0009853: photorespiration1.69E-02
72GO:0034599: cellular response to oxidative stress1.75E-02
73GO:0032259: methylation1.83E-02
74GO:0006839: mitochondrial transport1.86E-02
75GO:0042542: response to hydrogen peroxide1.97E-02
76GO:0042546: cell wall biogenesis2.09E-02
77GO:0006508: proteolysis2.11E-02
78GO:0009644: response to high light intensity2.14E-02
79GO:0006855: drug transmembrane transport2.26E-02
80GO:0015031: protein transport2.28E-02
81GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.32E-02
82GO:0009846: pollen germination2.38E-02
83GO:0051603: proteolysis involved in cellular protein catabolic process2.57E-02
84GO:0009553: embryo sac development3.16E-02
85GO:0009624: response to nematode3.22E-02
86GO:0016036: cellular response to phosphate starvation4.52E-02
RankGO TermAdjusted P value
1GO:0003846: 2-acylglycerol O-acyltransferase activity0.00E+00
2GO:0004622: lysophospholipase activity0.00E+00
3GO:0003994: aconitate hydratase activity4.47E-07
4GO:0004298: threonine-type endopeptidase activity1.10E-05
5GO:0008233: peptidase activity3.00E-05
6GO:0090430: caffeoyl-CoA: alcohol caffeoyl transferase activity9.14E-05
7GO:0004112: cyclic-nucleotide phosphodiesterase activity9.14E-05
8GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity9.14E-05
9GO:0004129: cytochrome-c oxidase activity1.33E-04
10GO:0018708: thiol S-methyltransferase activity2.16E-04
11GO:0004061: arylformamidase activity2.16E-04
12GO:0015036: disulfide oxidoreductase activity2.16E-04
13GO:0004776: succinate-CoA ligase (GDP-forming) activity2.16E-04
14GO:0004617: phosphoglycerate dehydrogenase activity2.16E-04
15GO:0004775: succinate-CoA ligase (ADP-forming) activity2.16E-04
16GO:0050833: pyruvate transmembrane transporter activity3.61E-04
17GO:0008964: phosphoenolpyruvate carboxylase activity3.61E-04
18GO:0008430: selenium binding3.61E-04
19GO:0015035: protein disulfide oxidoreductase activity4.75E-04
20GO:0004449: isocitrate dehydrogenase (NAD+) activity5.20E-04
21GO:0016004: phospholipase activator activity6.90E-04
22GO:0010279: indole-3-acetic acid amido synthetase activity6.90E-04
23GO:0009916: alternative oxidase activity6.90E-04
24GO:0036402: proteasome-activating ATPase activity1.07E-03
25GO:0003978: UDP-glucose 4-epimerase activity1.27E-03
26GO:0008113: peptide-methionine (S)-S-oxide reductase activity1.27E-03
27GO:0051920: peroxiredoxin activity1.27E-03
28GO:0004747: ribokinase activity1.27E-03
29GO:0008865: fructokinase activity1.72E-03
30GO:0016209: antioxidant activity1.72E-03
31GO:0051539: 4 iron, 4 sulfur cluster binding1.81E-03
32GO:0008889: glycerophosphodiester phosphodiesterase activity2.21E-03
33GO:0005507: copper ion binding2.28E-03
34GO:0008171: O-methyltransferase activity2.75E-03
35GO:0008794: arsenate reductase (glutaredoxin) activity3.03E-03
36GO:0031625: ubiquitin protein ligase binding3.04E-03
37GO:0005509: calcium ion binding3.44E-03
38GO:0004022: alcohol dehydrogenase (NAD) activity3.63E-03
39GO:0005315: inorganic phosphate transmembrane transporter activity3.63E-03
40GO:0009982: pseudouridine synthase activity3.63E-03
41GO:0015114: phosphate ion transmembrane transporter activity3.63E-03
42GO:0009055: electron carrier activity3.64E-03
43GO:0017025: TBP-class protein binding4.26E-03
44GO:0004190: aspartic-type endopeptidase activity4.26E-03
45GO:0051536: iron-sulfur cluster binding4.92E-03
46GO:0016887: ATPase activity5.80E-03
47GO:0047134: protein-disulfide reductase activity7.11E-03
48GO:0004791: thioredoxin-disulfide reductase activity8.32E-03
49GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.00E-02
50GO:0016597: amino acid binding1.14E-02
51GO:0015238: drug transmembrane transporter activity1.48E-02
52GO:0005215: transporter activity1.92E-02
53GO:0051537: 2 iron, 2 sulfur cluster binding2.14E-02
54GO:0051287: NAD binding2.32E-02
55GO:0016491: oxidoreductase activity2.39E-02
56GO:0016298: lipase activity2.57E-02
57GO:0008234: cysteine-type peptidase activity2.70E-02
58GO:0051082: unfolded protein binding3.22E-02
59GO:0008565: protein transporter activity4.30E-02
60GO:0016787: hydrolase activity4.36E-02
61GO:0015297: antiporter activity4.60E-02
RankGO TermAdjusted P value
1GO:0046862: chromoplast membrane0.00E+00
2GO:0000502: proteasome complex6.12E-07
3GO:0005839: proteasome core complex1.10E-05
4GO:0019773: proteasome core complex, alpha-subunit complex6.27E-05
5GO:0005787: signal peptidase complex9.14E-05
6GO:0005773: vacuole1.09E-04
7GO:0031314: extrinsic component of mitochondrial inner membrane2.16E-04
8GO:0005751: mitochondrial respiratory chain complex IV3.61E-04
9GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane6.90E-04
10GO:0031372: UBC13-MMS2 complex6.90E-04
11GO:0030660: Golgi-associated vesicle membrane6.90E-04
12GO:0005746: mitochondrial respiratory chain8.73E-04
13GO:0005829: cytosol9.92E-04
14GO:0005798: Golgi-associated vesicle1.07E-03
15GO:0032588: trans-Golgi network membrane1.07E-03
16GO:0031597: cytosolic proteasome complex1.27E-03
17GO:0031595: nuclear proteasome complex1.49E-03
18GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane1.72E-03
19GO:0031305: integral component of mitochondrial inner membrane1.72E-03
20GO:0045273: respiratory chain complex II1.72E-03
21GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)1.72E-03
22GO:0005739: mitochondrion1.94E-03
23GO:0005811: lipid particle1.96E-03
24GO:0031901: early endosome membrane2.21E-03
25GO:0031090: organelle membrane2.21E-03
26GO:0008540: proteasome regulatory particle, base subcomplex2.48E-03
27GO:0005783: endoplasmic reticulum2.75E-03
28GO:0005765: lysosomal membrane3.03E-03
29GO:0009507: chloroplast4.91E-03
30GO:0045271: respiratory chain complex I5.27E-03
31GO:0070469: respiratory chain5.27E-03
32GO:0009536: plastid5.30E-03
33GO:0005618: cell wall9.53E-03
34GO:0005778: peroxisomal membrane1.09E-02
35GO:0005788: endoplasmic reticulum lumen1.23E-02
36GO:0031969: chloroplast membrane1.29E-02
37GO:0019005: SCF ubiquitin ligase complex1.43E-02
38GO:0005886: plasma membrane1.47E-02
39GO:0005743: mitochondrial inner membrane1.77E-02
40GO:0005794: Golgi apparatus2.06E-02
41GO:0031966: mitochondrial membrane2.38E-02
42GO:0005774: vacuolar membrane2.52E-02
43GO:0048046: apoplast2.71E-02
44GO:0005789: endoplasmic reticulum membrane2.87E-02
45GO:0005747: mitochondrial respiratory chain complex I2.89E-02
46GO:0005623: cell3.85E-02
47GO:0005777: peroxisome3.88E-02
<
Gene type



Gene DE type