co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G06710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
2	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
3	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
4	GO:2000605: positive regulation of secondary growth	0.00E+00
5	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
6	GO:0015808: L-alanine transport	7.23E-05
7	GO:0031338: regulation of vesicle fusion	7.23E-05
8	GO:0034757: negative regulation of iron ion transport	7.23E-05
9	GO:0007166: cell surface receptor signaling pathway	7.31E-05
10	GO:0010271: regulation of chlorophyll catabolic process	1.74E-04
11	GO:0071497: cellular response to freezing	1.74E-04
12	GO:0098712: L-glutamate import across plasma membrane	1.74E-04
13	GO:0015804: neutral amino acid transport	1.74E-04
14	GO:0090630: activation of GTPase activity	2.93E-04
15	GO:0080117: secondary growth	2.93E-04
16	GO:0010051: xylem and phloem pattern formation	3.89E-04
17	GO:0010305: leaf vascular tissue pattern formation	4.18E-04
18	GO:0009067: aspartate family amino acid biosynthetic process	4.23E-04
19	GO:0051639: actin filament network formation	4.23E-04
20	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	5.65E-04
21	GO:1901141: regulation of lignin biosynthetic process	5.65E-04
22	GO:0051764: actin crosslink formation	5.65E-04
23	GO:0071805: potassium ion transmembrane transport	6.57E-04
24	GO:0048497: maintenance of floral organ identity	7.14E-04
25	GO:0016120: carotene biosynthetic process	7.14E-04
26	GO:0016126: sterol biosynthetic process	7.34E-04
27	GO:0010304: PSII associated light-harvesting complex II catabolic process	8.73E-04
28	GO:0042549: photosystem II stabilization	8.73E-04
29	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	8.73E-04
30	GO:0009913: epidermal cell differentiation	8.73E-04
31	GO:0048831: regulation of shoot system development	8.73E-04
32	GO:0009942: longitudinal axis specification	1.04E-03
33	GO:0048509: regulation of meristem development	1.04E-03
34	GO:0009088: threonine biosynthetic process	1.04E-03
35	GO:0043090: amino acid import	1.21E-03
36	GO:0008610: lipid biosynthetic process	1.40E-03
37	GO:0071482: cellular response to light stimulus	1.59E-03
38	GO:0015996: chlorophyll catabolic process	1.59E-03
39	GO:0009827: plant-type cell wall modification	1.59E-03
40	GO:0010233: phloem transport	1.59E-03
41	GO:0006468: protein phosphorylation	1.70E-03
42	GO:0048507: meristem development	1.80E-03
43	GO:0034765: regulation of ion transmembrane transport	1.80E-03
44	GO:0006779: porphyrin-containing compound biosynthetic process	2.01E-03
45	GO:0006782: protoporphyrinogen IX biosynthetic process	2.23E-03
46	GO:1903507: negative regulation of nucleic acid-templated transcription	2.46E-03
47	GO:0018119: peptidyl-cysteine S-nitrosylation	2.46E-03
48	GO:0009089: lysine biosynthetic process via diaminopimelate	2.46E-03
49	GO:0018105: peptidyl-serine phosphorylation	2.94E-03
50	GO:0018107: peptidyl-threonine phosphorylation	2.94E-03
51	GO:0010102: lateral root morphogenesis	2.94E-03
52	GO:0048768: root hair cell tip growth	3.19E-03
53	GO:0051017: actin filament bundle assembly	3.98E-03
54	GO:0008299: isoprenoid biosynthetic process	4.26E-03
55	GO:0046686: response to cadmium ion	4.72E-03
56	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.83E-03
57	GO:0030245: cellulose catabolic process	4.83E-03
58	GO:0071215: cellular response to abscisic acid stimulus	5.13E-03
59	GO:0070417: cellular response to cold	5.74E-03
60	GO:0010087: phloem or xylem histogenesis	6.05E-03
61	GO:0042391: regulation of membrane potential	6.05E-03
62	GO:0045489: pectin biosynthetic process	6.38E-03
63	GO:0019252: starch biosynthetic process	7.04E-03
64	GO:0048825: cotyledon development	7.04E-03
65	GO:0016032: viral process	7.72E-03
66	GO:1901657: glycosyl compound metabolic process	8.07E-03
67	GO:0080167: response to karrikin	9.41E-03
68	GO:0010027: thylakoid membrane organization	9.54E-03
69	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.74E-03
70	GO:0010029: regulation of seed germination	9.92E-03
71	GO:0046777: protein autophosphorylation	1.01E-02
72	GO:0015995: chlorophyll biosynthetic process	1.07E-02
73	GO:0030244: cellulose biosynthetic process	1.15E-02
74	GO:0000160: phosphorelay signal transduction system	1.19E-02
75	GO:0009834: plant-type secondary cell wall biogenesis	1.23E-02
76	GO:0006811: ion transport	1.23E-02
77	GO:0009631: cold acclimation	1.27E-02
78	GO:0009733: response to auxin	1.31E-02
79	GO:0006839: mitochondrial transport	1.49E-02
80	GO:0009753: response to jasmonic acid	1.50E-02
81	GO:0009636: response to toxic substance	1.77E-02
82	GO:0031347: regulation of defense response	1.86E-02
83	GO:0005975: carbohydrate metabolic process	1.93E-02
84	GO:0009734: auxin-activated signaling pathway	1.97E-02
85	GO:0009736: cytokinin-activated signaling pathway	2.01E-02
86	GO:0006364: rRNA processing	2.01E-02
87	GO:0006813: potassium ion transport	2.01E-02
88	GO:0009909: regulation of flower development	2.16E-02
89	GO:0009611: response to wounding	2.53E-02
90	GO:0009624: response to nematode	2.58E-02
91	GO:0035556: intracellular signal transduction	2.62E-02
92	GO:0009742: brassinosteroid mediated signaling pathway	2.69E-02
93	GO:0009845: seed germination	3.20E-02
94	GO:0009790: embryo development	3.38E-02
95	GO:0016310: phosphorylation	3.51E-02
96	GO:0006413: translational initiation	3.63E-02
97	GO:0007623: circadian rhythm	3.81E-02
98	GO:0009739: response to gibberellin	4.13E-02

Rank	GO Term	Adjusted P value
1	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
2	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
3	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
4	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
5	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.42E-06
6	GO:0034256: chlorophyll(ide) b reductase activity	7.23E-05
7	GO:0004163: diphosphomevalonate decarboxylase activity	7.23E-05
8	GO:0015194: L-serine transmembrane transporter activity	7.23E-05
9	GO:0004856: xylulokinase activity	7.23E-05
10	GO:0042802: identical protein binding	8.88E-05
11	GO:0015180: L-alanine transmembrane transporter activity	1.74E-04
12	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	1.74E-04
13	GO:0009884: cytokinin receptor activity	1.74E-04
14	GO:0019172: glyoxalase III activity	1.74E-04
15	GO:0015193: L-proline transmembrane transporter activity	2.93E-04
16	GO:0005034: osmosensor activity	2.93E-04
17	GO:0070402: NADPH binding	2.93E-04
18	GO:0015186: L-glutamine transmembrane transporter activity	4.23E-04
19	GO:0004072: aspartate kinase activity	4.23E-04
20	GO:0015175: neutral amino acid transmembrane transporter activity	4.23E-04
21	GO:0005313: L-glutamate transmembrane transporter activity	5.65E-04
22	GO:0004506: squalene monooxygenase activity	5.65E-04
23	GO:0009011: starch synthase activity	5.65E-04
24	GO:0016773: phosphotransferase activity, alcohol group as acceptor	7.14E-04
25	GO:0017137: Rab GTPase binding	7.14E-04
26	GO:0004462: lactoylglutathione lyase activity	8.73E-04
27	GO:0042578: phosphoric ester hydrolase activity	8.73E-04
28	GO:0004672: protein kinase activity	9.70E-04
29	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.04E-03
30	GO:0019900: kinase binding	1.04E-03
31	GO:0005242: inward rectifier potassium channel activity	1.04E-03
32	GO:0043022: ribosome binding	1.40E-03
33	GO:0004673: protein histidine kinase activity	2.23E-03
34	GO:0004713: protein tyrosine kinase activity	2.23E-03
35	GO:0004674: protein serine/threonine kinase activity	2.29E-03
36	GO:0005524: ATP binding	2.48E-03
37	GO:0000155: phosphorelay sensor kinase activity	2.94E-03
38	GO:0016301: kinase activity	3.22E-03
39	GO:0016491: oxidoreductase activity	3.66E-03
40	GO:0003714: transcription corepressor activity	3.98E-03
41	GO:0043424: protein histidine kinase binding	4.26E-03
42	GO:0015079: potassium ion transmembrane transporter activity	4.26E-03
43	GO:0008810: cellulase activity	5.13E-03
44	GO:0005249: voltage-gated potassium channel activity	6.05E-03
45	GO:0030551: cyclic nucleotide binding	6.05E-03
46	GO:0016853: isomerase activity	6.70E-03
47	GO:0019901: protein kinase binding	7.04E-03
48	GO:0051015: actin filament binding	8.07E-03
49	GO:0016413: O-acetyltransferase activity	9.16E-03
50	GO:0016597: amino acid binding	9.16E-03
51	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.03E-02
52	GO:0004683: calmodulin-dependent protein kinase activity	1.07E-02
53	GO:0102483: scopolin beta-glucosidase activity	1.07E-02
54	GO:0004721: phosphoprotein phosphatase activity	1.07E-02
55	GO:0005096: GTPase activator activity	1.19E-02
56	GO:0030145: manganese ion binding	1.27E-02
57	GO:0003746: translation elongation factor activity	1.36E-02
58	GO:0008422: beta-glucosidase activity	1.45E-02
59	GO:0042393: histone binding	1.49E-02
60	GO:0015293: symporter activity	1.77E-02
61	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.81E-02
62	GO:0003777: microtubule motor activity	2.16E-02
63	GO:0015171: amino acid transmembrane transporter activity	2.16E-02
64	GO:0003779: actin binding	2.53E-02
65	GO:0016746: transferase activity, transferring acyl groups	2.64E-02
66	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.27E-02
67	GO:0005516: calmodulin binding	3.72E-02
68	GO:0003743: translation initiation factor activity	4.26E-02
69	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.52E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	9.13E-06
2	GO:0032432: actin filament bundle	4.23E-04
3	GO:0009570: chloroplast stroma	1.19E-03
4	GO:0031969: chloroplast membrane	1.37E-03
5	GO:0005884: actin filament	2.46E-03
6	GO:0005886: plasma membrane	7.93E-03
7	GO:0031977: thylakoid lumen	1.54E-02
8	GO:0016021: integral component of membrane	1.78E-02
9	GO:0012505: endomembrane system	2.53E-02
10	GO:0009506: plasmodesma	4.28E-02
11	GO:0005622: intracellular	4.38E-02