Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G03880

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
2GO:0035970: peptidyl-threonine dephosphorylation0.00E+00
3GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly2.22E-07
4GO:0006898: receptor-mediated endocytosis4.35E-05
5GO:0019252: starch biosynthetic process6.79E-05
6GO:0016045: detection of bacterium7.77E-05
7GO:0010359: regulation of anion channel activity7.77E-05
8GO:1901332: negative regulation of lateral root development1.17E-04
9GO:0006020: inositol metabolic process1.17E-04
10GO:0006021: inositol biosynthetic process1.61E-04
11GO:0010021: amylopectin biosynthetic process1.61E-04
12GO:0016120: carotene biosynthetic process2.09E-04
13GO:0046855: inositol phosphate dephosphorylation2.59E-04
14GO:0005978: glycogen biosynthetic process4.23E-04
15GO:0009787: regulation of abscisic acid-activated signaling pathway4.23E-04
16GO:0071482: cellular response to light stimulus4.82E-04
17GO:0009773: photosynthetic electron transport in photosystem I7.34E-04
18GO:0052544: defense response by callose deposition in cell wall7.34E-04
19GO:0006790: sulfur compound metabolic process8.01E-04
20GO:0005983: starch catabolic process8.01E-04
21GO:0046854: phosphatidylinositol phosphorylation1.01E-03
22GO:0035428: hexose transmembrane transport1.39E-03
23GO:0046323: glucose import1.82E-03
24GO:0010027: thylakoid membrane organization2.68E-03
25GO:0009817: defense response to fungus, incompatible interaction3.20E-03
26GO:0010311: lateral root formation3.31E-03
27GO:0007623: circadian rhythm1.02E-02
28GO:0006470: protein dephosphorylation1.12E-02
29GO:0006810: transport1.14E-02
30GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.66E-02
31GO:0045892: negative regulation of transcription, DNA-templated1.86E-02
32GO:0008152: metabolic process2.29E-02
33GO:0009734: auxin-activated signaling pathway2.73E-02
34GO:0009738: abscisic acid-activated signaling pathway3.15E-02
35GO:0045893: positive regulation of transcription, DNA-templated3.55E-02
RankGO TermAdjusted P value
1GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
2GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
3GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor4.37E-07
4GO:0019203: carbohydrate phosphatase activity1.67E-05
5GO:0050308: sugar-phosphatase activity1.67E-05
6GO:0016868: intramolecular transferase activity, phosphotransferases4.35E-05
7GO:0052832: inositol monophosphate 3-phosphatase activity4.35E-05
8GO:0033201: alpha-1,4-glucan synthase activity4.35E-05
9GO:0008934: inositol monophosphate 1-phosphatase activity4.35E-05
10GO:0052833: inositol monophosphate 4-phosphatase activity4.35E-05
11GO:0048038: quinone binding7.33E-05
12GO:0004373: glycogen (starch) synthase activity7.77E-05
13GO:0019201: nucleotide kinase activity1.17E-04
14GO:0009011: starch synthase activity1.61E-04
15GO:0008878: glucose-1-phosphate adenylyltransferase activity1.61E-04
16GO:2001070: starch binding2.59E-04
17GO:0004017: adenylate kinase activity3.11E-04
18GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.11E-04
19GO:0008138: protein tyrosine/serine/threonine phosphatase activity5.42E-04
20GO:0015386: potassium:proton antiporter activity7.34E-04
21GO:0015079: potassium ion transmembrane transporter activity1.23E-03
22GO:0005355: glucose transmembrane transporter activity1.91E-03
23GO:0004721: phosphoprotein phosphatase activity2.99E-03
24GO:0015144: carbohydrate transmembrane transporter activity9.26E-03
25GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.74E-03
26GO:0005351: sugar:proton symporter activity1.01E-02
27GO:0016787: hydrolase activity1.66E-02
28GO:0042803: protein homodimerization activity1.91E-02
RankGO TermAdjusted P value
1GO:0098572: stromal side of plastid thylakoid membrane0.00E+00
2GO:0009507: chloroplast2.74E-15
3GO:0009941: chloroplast envelope2.34E-10
4GO:0009570: chloroplast stroma2.51E-08
5GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)5.52E-06
6GO:0009534: chloroplast thylakoid4.81E-05
7GO:0031969: chloroplast membrane1.20E-04
8GO:0009501: amyloplast4.23E-04
9GO:0009535: chloroplast thylakoid membrane4.63E-04
10GO:0042644: chloroplast nucleoid5.42E-04
11GO:0009508: plastid chromosome8.70E-04
12GO:0042651: thylakoid membrane1.23E-03
13GO:0009295: nucleoid2.48E-03
14GO:0010008: endosome membrane6.28E-03
15GO:0009706: chloroplast inner membrane6.99E-03
16GO:0010287: plastoglobule7.87E-03
17GO:0016021: integral component of membrane3.38E-02
18GO:0005768: endosome4.94E-02
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Gene type



Gene DE type