GO Enrichment Analysis of Co-expressed Genes with
AT5G03120
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901698: response to nitrogen compound | 0.00E+00 |
| 2 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 3 | GO:0042335: cuticle development | 3.24E-06 |
| 4 | GO:0010583: response to cyclopentenone | 7.06E-06 |
| 5 | GO:0006833: water transport | 3.03E-05 |
| 6 | GO:0010444: guard mother cell differentiation | 1.09E-04 |
| 7 | GO:0046520: sphingoid biosynthetic process | 1.80E-04 |
| 8 | GO:0070509: calcium ion import | 1.80E-04 |
| 9 | GO:0007263: nitric oxide mediated signal transduction | 1.80E-04 |
| 10 | GO:0006723: cuticle hydrocarbon biosynthetic process | 1.80E-04 |
| 11 | GO:0043007: maintenance of rDNA | 1.80E-04 |
| 12 | GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway | 1.80E-04 |
| 13 | GO:0016126: sterol biosynthetic process | 2.41E-04 |
| 14 | GO:0000038: very long-chain fatty acid metabolic process | 3.48E-04 |
| 15 | GO:0010115: regulation of abscisic acid biosynthetic process | 4.05E-04 |
| 16 | GO:0045717: negative regulation of fatty acid biosynthetic process | 4.05E-04 |
| 17 | GO:0006695: cholesterol biosynthetic process | 4.05E-04 |
| 18 | GO:0006633: fatty acid biosynthetic process | 4.12E-04 |
| 19 | GO:0010025: wax biosynthetic process | 6.38E-04 |
| 20 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 6.61E-04 |
| 21 | GO:0015840: urea transport | 6.61E-04 |
| 22 | GO:0071705: nitrogen compound transport | 6.61E-04 |
| 23 | GO:1902448: positive regulation of shade avoidance | 6.61E-04 |
| 24 | GO:0043447: alkane biosynthetic process | 6.61E-04 |
| 25 | GO:0005992: trehalose biosynthetic process | 7.06E-04 |
| 26 | GO:0009826: unidimensional cell growth | 8.75E-04 |
| 27 | GO:0010731: protein glutathionylation | 9.45E-04 |
| 28 | GO:0046739: transport of virus in multicellular host | 9.45E-04 |
| 29 | GO:0051639: actin filament network formation | 9.45E-04 |
| 30 | GO:0007049: cell cycle | 1.09E-03 |
| 31 | GO:0000919: cell plate assembly | 1.25E-03 |
| 32 | GO:0006808: regulation of nitrogen utilization | 1.25E-03 |
| 33 | GO:0051764: actin crosslink formation | 1.25E-03 |
| 34 | GO:0071249: cellular response to nitrate | 1.25E-03 |
| 35 | GO:0006183: GTP biosynthetic process | 1.25E-03 |
| 36 | GO:0000271: polysaccharide biosynthetic process | 1.27E-03 |
| 37 | GO:0034220: ion transmembrane transport | 1.27E-03 |
| 38 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.34E-03 |
| 39 | GO:0009742: brassinosteroid mediated signaling pathway | 1.56E-03 |
| 40 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.59E-03 |
| 41 | GO:0016132: brassinosteroid biosynthetic process | 1.68E-03 |
| 42 | GO:0006561: proline biosynthetic process | 1.96E-03 |
| 43 | GO:0042372: phylloquinone biosynthetic process | 2.35E-03 |
| 44 | GO:0006694: steroid biosynthetic process | 2.35E-03 |
| 45 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.35E-03 |
| 46 | GO:0071669: plant-type cell wall organization or biogenesis | 2.77E-03 |
| 47 | GO:0050829: defense response to Gram-negative bacterium | 2.77E-03 |
| 48 | GO:0051510: regulation of unidimensional cell growth | 2.77E-03 |
| 49 | GO:0030497: fatty acid elongation | 2.77E-03 |
| 50 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 2.77E-03 |
| 51 | GO:0030244: cellulose biosynthetic process | 3.15E-03 |
| 52 | GO:0009690: cytokinin metabolic process | 3.21E-03 |
| 53 | GO:0007155: cell adhesion | 3.21E-03 |
| 54 | GO:0008610: lipid biosynthetic process | 3.21E-03 |
| 55 | GO:0000160: phosphorelay signal transduction system | 3.30E-03 |
| 56 | GO:0010497: plasmodesmata-mediated intercellular transport | 3.67E-03 |
| 57 | GO:0009808: lignin metabolic process | 3.67E-03 |
| 58 | GO:0009932: cell tip growth | 3.67E-03 |
| 59 | GO:0033384: geranyl diphosphate biosynthetic process | 4.15E-03 |
| 60 | GO:0006783: heme biosynthetic process | 4.15E-03 |
| 61 | GO:0045337: farnesyl diphosphate biosynthetic process | 4.15E-03 |
| 62 | GO:0009414: response to water deprivation | 4.27E-03 |
| 63 | GO:0071555: cell wall organization | 4.46E-03 |
| 64 | GO:0006779: porphyrin-containing compound biosynthetic process | 4.65E-03 |
| 65 | GO:0009735: response to cytokinin | 4.81E-03 |
| 66 | GO:0006782: protoporphyrinogen IX biosynthetic process | 5.18E-03 |
| 67 | GO:0009870: defense response signaling pathway, resistance gene-dependent | 5.18E-03 |
| 68 | GO:0006535: cysteine biosynthetic process from serine | 5.18E-03 |
| 69 | GO:0009688: abscisic acid biosynthetic process | 5.18E-03 |
| 70 | GO:0042546: cell wall biogenesis | 5.33E-03 |
| 71 | GO:0009750: response to fructose | 5.72E-03 |
| 72 | GO:0015706: nitrate transport | 6.28E-03 |
| 73 | GO:0010152: pollen maturation | 6.28E-03 |
| 74 | GO:0050826: response to freezing | 6.86E-03 |
| 75 | GO:0009736: cytokinin-activated signaling pathway | 6.90E-03 |
| 76 | GO:0010207: photosystem II assembly | 7.46E-03 |
| 77 | GO:0010030: positive regulation of seed germination | 8.08E-03 |
| 78 | GO:0010167: response to nitrate | 8.08E-03 |
| 79 | GO:0051017: actin filament bundle assembly | 9.37E-03 |
| 80 | GO:0019344: cysteine biosynthetic process | 9.37E-03 |
| 81 | GO:0007017: microtubule-based process | 1.00E-02 |
| 82 | GO:0051726: regulation of cell cycle | 1.04E-02 |
| 83 | GO:0035428: hexose transmembrane transport | 1.14E-02 |
| 84 | GO:0019722: calcium-mediated signaling | 1.29E-02 |
| 85 | GO:0042127: regulation of cell proliferation | 1.29E-02 |
| 86 | GO:0048443: stamen development | 1.29E-02 |
| 87 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.37E-02 |
| 88 | GO:0042391: regulation of membrane potential | 1.44E-02 |
| 89 | GO:0000413: protein peptidyl-prolyl isomerization | 1.44E-02 |
| 90 | GO:0042631: cellular response to water deprivation | 1.44E-02 |
| 91 | GO:0010305: leaf vascular tissue pattern formation | 1.52E-02 |
| 92 | GO:0010182: sugar mediated signaling pathway | 1.52E-02 |
| 93 | GO:0046323: glucose import | 1.52E-02 |
| 94 | GO:0009741: response to brassinosteroid | 1.52E-02 |
| 95 | GO:0045489: pectin biosynthetic process | 1.52E-02 |
| 96 | GO:0009734: auxin-activated signaling pathway | 1.68E-02 |
| 97 | GO:0009791: post-embryonic development | 1.68E-02 |
| 98 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 1.77E-02 |
| 99 | GO:0071554: cell wall organization or biogenesis | 1.77E-02 |
| 100 | GO:0048235: pollen sperm cell differentiation | 1.85E-02 |
| 101 | GO:0032502: developmental process | 1.85E-02 |
| 102 | GO:0009793: embryo development ending in seed dormancy | 1.91E-02 |
| 103 | GO:1901657: glycosyl compound metabolic process | 1.94E-02 |
| 104 | GO:0009567: double fertilization forming a zygote and endosperm | 2.03E-02 |
| 105 | GO:0007267: cell-cell signaling | 2.11E-02 |
| 106 | GO:0042128: nitrate assimilation | 2.48E-02 |
| 107 | GO:0051301: cell division | 2.51E-02 |
| 108 | GO:0010411: xyloglucan metabolic process | 2.58E-02 |
| 109 | GO:0015995: chlorophyll biosynthetic process | 2.58E-02 |
| 110 | GO:0016311: dephosphorylation | 2.68E-02 |
| 111 | GO:0006810: transport | 2.83E-02 |
| 112 | GO:0055114: oxidation-reduction process | 2.84E-02 |
| 113 | GO:0006970: response to osmotic stress | 2.85E-02 |
| 114 | GO:0009860: pollen tube growth | 2.85E-02 |
| 115 | GO:0010311: lateral root formation | 2.87E-02 |
| 116 | GO:0009832: plant-type cell wall biogenesis | 2.87E-02 |
| 117 | GO:0009834: plant-type secondary cell wall biogenesis | 2.97E-02 |
| 118 | GO:0007568: aging | 3.08E-02 |
| 119 | GO:0080167: response to karrikin | 3.27E-02 |
| 120 | GO:0016051: carbohydrate biosynthetic process | 3.28E-02 |
| 121 | GO:0009640: photomorphogenesis | 3.93E-02 |
| 122 | GO:0008643: carbohydrate transport | 4.16E-02 |
| 123 | GO:0006869: lipid transport | 4.29E-02 |
| 124 | GO:0009664: plant-type cell wall organization | 4.62E-02 |
| 125 | GO:0051603: proteolysis involved in cellular protein catabolic process | 4.98E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0038198: auxin receptor activity | 0.00E+00 |
| 2 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 3 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 4 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 5 | GO:0005048: signal sequence binding | 0.00E+00 |
| 6 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 7 | GO:0005222: intracellular cAMP activated cation channel activity | 0.00E+00 |
| 8 | GO:0010301: xanthoxin dehydrogenase activity | 0.00E+00 |
| 9 | GO:0051753: mannan synthase activity | 8.20E-05 |
| 10 | GO:0009374: biotin binding | 1.80E-04 |
| 11 | GO:0015200: methylammonium transmembrane transporter activity | 1.80E-04 |
| 12 | GO:0004328: formamidase activity | 1.80E-04 |
| 13 | GO:0005221: intracellular cyclic nucleotide activated cation channel activity | 1.80E-04 |
| 14 | GO:0000248: C-5 sterol desaturase activity | 1.80E-04 |
| 15 | GO:0000170: sphingosine hydroxylase activity | 1.80E-04 |
| 16 | GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity | 1.80E-04 |
| 17 | GO:0004655: porphobilinogen synthase activity | 1.80E-04 |
| 18 | GO:0015250: water channel activity | 2.41E-04 |
| 19 | GO:0004805: trehalose-phosphatase activity | 3.00E-04 |
| 20 | GO:0000822: inositol hexakisphosphate binding | 4.05E-04 |
| 21 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 4.05E-04 |
| 22 | GO:0003938: IMP dehydrogenase activity | 4.05E-04 |
| 23 | GO:0042284: sphingolipid delta-4 desaturase activity | 4.05E-04 |
| 24 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 6.38E-04 |
| 25 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 6.38E-04 |
| 26 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 6.38E-04 |
| 27 | GO:0004148: dihydrolipoyl dehydrogenase activity | 6.61E-04 |
| 28 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 6.61E-04 |
| 29 | GO:0017150: tRNA dihydrouridine synthase activity | 6.61E-04 |
| 30 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 9.45E-04 |
| 31 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 9.45E-04 |
| 32 | GO:0001872: (1->3)-beta-D-glucan binding | 9.45E-04 |
| 33 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 9.45E-04 |
| 34 | GO:0046527: glucosyltransferase activity | 1.25E-03 |
| 35 | GO:0015204: urea transmembrane transporter activity | 1.25E-03 |
| 36 | GO:0010011: auxin binding | 1.25E-03 |
| 37 | GO:0016836: hydro-lyase activity | 1.25E-03 |
| 38 | GO:0004506: squalene monooxygenase activity | 1.25E-03 |
| 39 | GO:0003989: acetyl-CoA carboxylase activity | 1.59E-03 |
| 40 | GO:0009922: fatty acid elongase activity | 1.59E-03 |
| 41 | GO:0000156: phosphorelay response regulator activity | 1.91E-03 |
| 42 | GO:0016208: AMP binding | 1.96E-03 |
| 43 | GO:0008519: ammonium transmembrane transporter activity | 1.96E-03 |
| 44 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.16E-03 |
| 45 | GO:0005261: cation channel activity | 2.35E-03 |
| 46 | GO:0005242: inward rectifier potassium channel activity | 2.35E-03 |
| 47 | GO:0004124: cysteine synthase activity | 2.35E-03 |
| 48 | GO:0005516: calmodulin binding | 2.65E-03 |
| 49 | GO:0008312: 7S RNA binding | 3.21E-03 |
| 50 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 3.47E-03 |
| 51 | GO:0004337: geranyltranstransferase activity | 4.15E-03 |
| 52 | GO:0004161: dimethylallyltranstransferase activity | 5.72E-03 |
| 53 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 5.98E-03 |
| 54 | GO:0050660: flavin adenine dinucleotide binding | 6.07E-03 |
| 55 | GO:0004022: alcohol dehydrogenase (NAD) activity | 6.86E-03 |
| 56 | GO:0031072: heat shock protein binding | 6.86E-03 |
| 57 | GO:0005262: calcium channel activity | 6.86E-03 |
| 58 | GO:0016491: oxidoreductase activity | 7.20E-03 |
| 59 | GO:0030552: cAMP binding | 8.08E-03 |
| 60 | GO:0030553: cGMP binding | 8.08E-03 |
| 61 | GO:0004857: enzyme inhibitor activity | 9.37E-03 |
| 62 | GO:0005528: FK506 binding | 9.37E-03 |
| 63 | GO:0005216: ion channel activity | 1.00E-02 |
| 64 | GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity | 1.14E-02 |
| 65 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.22E-02 |
| 66 | GO:0003756: protein disulfide isomerase activity | 1.29E-02 |
| 67 | GO:0008514: organic anion transmembrane transporter activity | 1.29E-02 |
| 68 | GO:0030551: cyclic nucleotide binding | 1.44E-02 |
| 69 | GO:0015144: carbohydrate transmembrane transporter activity | 1.48E-02 |
| 70 | GO:0046910: pectinesterase inhibitor activity | 1.59E-02 |
| 71 | GO:0005355: glucose transmembrane transporter activity | 1.60E-02 |
| 72 | GO:0008289: lipid binding | 1.66E-02 |
| 73 | GO:0005351: sugar:proton symporter activity | 1.67E-02 |
| 74 | GO:0019901: protein kinase binding | 1.68E-02 |
| 75 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.77E-02 |
| 76 | GO:0051015: actin filament binding | 1.94E-02 |
| 77 | GO:0005200: structural constituent of cytoskeleton | 2.11E-02 |
| 78 | GO:0016597: amino acid binding | 2.20E-02 |
| 79 | GO:0016413: O-acetyltransferase activity | 2.20E-02 |
| 80 | GO:0046983: protein dimerization activity | 2.46E-02 |
| 81 | GO:0030247: polysaccharide binding | 2.58E-02 |
| 82 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.58E-02 |
| 83 | GO:0102483: scopolin beta-glucosidase activity | 2.58E-02 |
| 84 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.08E-02 |
| 85 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.18E-02 |
| 86 | GO:0003993: acid phosphatase activity | 3.39E-02 |
| 87 | GO:0005507: copper ion binding | 3.49E-02 |
| 88 | GO:0008422: beta-glucosidase activity | 3.50E-02 |
| 89 | GO:0052689: carboxylic ester hydrolase activity | 3.62E-02 |
| 90 | GO:0004364: glutathione transferase activity | 3.82E-02 |
| 91 | GO:0004185: serine-type carboxypeptidase activity | 3.93E-02 |
| 92 | GO:0015293: symporter activity | 4.27E-02 |
| 93 | GO:0003924: GTPase activity | 4.81E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031225: anchored component of membrane | 1.46E-10 |
| 2 | GO:0046658: anchored component of plasma membrane | 1.45E-09 |
| 3 | GO:0005886: plasma membrane | 1.30E-05 |
| 4 | GO:0080085: signal recognition particle, chloroplast targeting | 4.05E-04 |
| 5 | GO:0009505: plant-type cell wall | 5.09E-04 |
| 6 | GO:0009509: chromoplast | 6.61E-04 |
| 7 | GO:0009317: acetyl-CoA carboxylase complex | 6.61E-04 |
| 8 | GO:0005576: extracellular region | 8.52E-04 |
| 9 | GO:0032432: actin filament bundle | 9.45E-04 |
| 10 | GO:0009506: plasmodesma | 1.09E-03 |
| 11 | GO:0009941: chloroplast envelope | 1.12E-03 |
| 12 | GO:0005773: vacuole | 1.54E-03 |
| 13 | GO:0016021: integral component of membrane | 1.72E-03 |
| 14 | GO:0048046: apoplast | 1.76E-03 |
| 15 | GO:0005618: cell wall | 2.16E-03 |
| 16 | GO:0042807: central vacuole | 2.77E-03 |
| 17 | GO:0000151: ubiquitin ligase complex | 3.15E-03 |
| 18 | GO:0005786: signal recognition particle, endoplasmic reticulum targeting | 3.67E-03 |
| 19 | GO:0000326: protein storage vacuole | 3.67E-03 |
| 20 | GO:0005887: integral component of plasma membrane | 3.67E-03 |
| 21 | GO:0045298: tubulin complex | 4.15E-03 |
| 22 | GO:0031977: thylakoid lumen | 4.72E-03 |
| 23 | GO:0005884: actin filament | 5.72E-03 |
| 24 | GO:0005794: Golgi apparatus | 6.49E-03 |
| 25 | GO:0009508: plastid chromosome | 6.86E-03 |
| 26 | GO:0009570: chloroplast stroma | 7.09E-03 |
| 27 | GO:0030176: integral component of endoplasmic reticulum membrane | 8.08E-03 |
| 28 | GO:0009543: chloroplast thylakoid lumen | 1.23E-02 |
| 29 | GO:0009507: chloroplast | 1.64E-02 |
| 30 | GO:0016020: membrane | 1.86E-02 |
| 31 | GO:0071944: cell periphery | 1.94E-02 |
| 32 | GO:0005778: peroxisomal membrane | 2.11E-02 |
| 33 | GO:0009295: nucleoid | 2.11E-02 |
| 34 | GO:0000139: Golgi membrane | 2.51E-02 |
| 35 | GO:0019005: SCF ubiquitin ligase complex | 2.77E-02 |
| 36 | GO:0009534: chloroplast thylakoid | 2.85E-02 |
| 37 | GO:0005789: endoplasmic reticulum membrane | 3.00E-02 |
| 38 | GO:0005774: vacuolar membrane | 3.74E-02 |