GO Enrichment Analysis of Co-expressed Genes with
AT5G02180
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 3 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 4 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 6 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 7 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 8 | GO:0009773: photosynthetic electron transport in photosystem I | 4.60E-07 |
| 9 | GO:0015979: photosynthesis | 1.96E-05 |
| 10 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.55E-05 |
| 11 | GO:0006546: glycine catabolic process | 4.61E-05 |
| 12 | GO:0006810: transport | 4.74E-05 |
| 13 | GO:0010028: xanthophyll cycle | 2.60E-04 |
| 14 | GO:0034337: RNA folding | 2.60E-04 |
| 15 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 2.60E-04 |
| 16 | GO:0000476: maturation of 4.5S rRNA | 2.60E-04 |
| 17 | GO:0000967: rRNA 5'-end processing | 2.60E-04 |
| 18 | GO:0043266: regulation of potassium ion transport | 2.60E-04 |
| 19 | GO:0010480: microsporocyte differentiation | 2.60E-04 |
| 20 | GO:0031338: regulation of vesicle fusion | 2.60E-04 |
| 21 | GO:0000481: maturation of 5S rRNA | 2.60E-04 |
| 22 | GO:2000021: regulation of ion homeostasis | 2.60E-04 |
| 23 | GO:0032544: plastid translation | 3.02E-04 |
| 24 | GO:0008152: metabolic process | 3.24E-04 |
| 25 | GO:0010206: photosystem II repair | 3.65E-04 |
| 26 | GO:0016122: xanthophyll metabolic process | 5.74E-04 |
| 27 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 5.74E-04 |
| 28 | GO:0010270: photosystem II oxygen evolving complex assembly | 5.74E-04 |
| 29 | GO:0034470: ncRNA processing | 5.74E-04 |
| 30 | GO:1900871: chloroplast mRNA modification | 5.74E-04 |
| 31 | GO:0015995: chlorophyll biosynthetic process | 5.93E-04 |
| 32 | GO:0018298: protein-chromophore linkage | 6.75E-04 |
| 33 | GO:0009767: photosynthetic electron transport chain | 7.57E-04 |
| 34 | GO:0006000: fructose metabolic process | 9.31E-04 |
| 35 | GO:0006518: peptide metabolic process | 9.31E-04 |
| 36 | GO:0090630: activation of GTPase activity | 9.31E-04 |
| 37 | GO:2001295: malonyl-CoA biosynthetic process | 9.31E-04 |
| 38 | GO:0006833: water transport | 1.05E-03 |
| 39 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.28E-03 |
| 40 | GO:0080170: hydrogen peroxide transmembrane transport | 1.33E-03 |
| 41 | GO:0006424: glutamyl-tRNA aminoacylation | 1.33E-03 |
| 42 | GO:1901332: negative regulation of lateral root development | 1.33E-03 |
| 43 | GO:0055070: copper ion homeostasis | 1.33E-03 |
| 44 | GO:0015976: carbon utilization | 1.78E-03 |
| 45 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.78E-03 |
| 46 | GO:0045727: positive regulation of translation | 1.78E-03 |
| 47 | GO:0015994: chlorophyll metabolic process | 1.78E-03 |
| 48 | GO:2000122: negative regulation of stomatal complex development | 1.78E-03 |
| 49 | GO:0010021: amylopectin biosynthetic process | 1.78E-03 |
| 50 | GO:0010037: response to carbon dioxide | 1.78E-03 |
| 51 | GO:0006857: oligopeptide transport | 1.98E-03 |
| 52 | GO:0034220: ion transmembrane transport | 2.13E-03 |
| 53 | GO:0016120: carotene biosynthetic process | 2.27E-03 |
| 54 | GO:0032543: mitochondrial translation | 2.27E-03 |
| 55 | GO:0035434: copper ion transmembrane transport | 2.27E-03 |
| 56 | GO:0006461: protein complex assembly | 2.27E-03 |
| 57 | GO:0042549: photosystem II stabilization | 2.80E-03 |
| 58 | GO:0006828: manganese ion transport | 2.80E-03 |
| 59 | GO:0000741: karyogamy | 2.80E-03 |
| 60 | GO:0010190: cytochrome b6f complex assembly | 2.80E-03 |
| 61 | GO:0006751: glutathione catabolic process | 2.80E-03 |
| 62 | GO:0009735: response to cytokinin | 2.82E-03 |
| 63 | GO:0009772: photosynthetic electron transport in photosystem II | 3.97E-03 |
| 64 | GO:0048437: floral organ development | 3.97E-03 |
| 65 | GO:0010196: nonphotochemical quenching | 3.97E-03 |
| 66 | GO:0009645: response to low light intensity stimulus | 3.97E-03 |
| 67 | GO:0042128: nitrate assimilation | 4.56E-03 |
| 68 | GO:0032508: DNA duplex unwinding | 4.60E-03 |
| 69 | GO:0010492: maintenance of shoot apical meristem identity | 4.60E-03 |
| 70 | GO:0032259: methylation | 4.85E-03 |
| 71 | GO:0006002: fructose 6-phosphate metabolic process | 5.27E-03 |
| 72 | GO:0071482: cellular response to light stimulus | 5.27E-03 |
| 73 | GO:0009657: plastid organization | 5.27E-03 |
| 74 | GO:0006526: arginine biosynthetic process | 5.27E-03 |
| 75 | GO:0009817: defense response to fungus, incompatible interaction | 5.32E-03 |
| 76 | GO:0007623: circadian rhythm | 5.68E-03 |
| 77 | GO:0048507: meristem development | 5.98E-03 |
| 78 | GO:0006779: porphyrin-containing compound biosynthetic process | 6.71E-03 |
| 79 | GO:0006782: protoporphyrinogen IX biosynthetic process | 7.47E-03 |
| 80 | GO:0030001: metal ion transport | 7.69E-03 |
| 81 | GO:0006816: calcium ion transport | 8.27E-03 |
| 82 | GO:1903507: negative regulation of nucleic acid-templated transcription | 8.27E-03 |
| 83 | GO:0048229: gametophyte development | 8.27E-03 |
| 84 | GO:0009644: response to high light intensity | 9.42E-03 |
| 85 | GO:0009658: chloroplast organization | 9.92E-03 |
| 86 | GO:0009718: anthocyanin-containing compound biosynthetic process | 9.94E-03 |
| 87 | GO:0010075: regulation of meristem growth | 9.94E-03 |
| 88 | GO:0006094: gluconeogenesis | 9.94E-03 |
| 89 | GO:0005986: sucrose biosynthetic process | 9.94E-03 |
| 90 | GO:0018107: peptidyl-threonine phosphorylation | 9.94E-03 |
| 91 | GO:0009934: regulation of meristem structural organization | 1.08E-02 |
| 92 | GO:0019253: reductive pentose-phosphate cycle | 1.08E-02 |
| 93 | GO:0010207: photosystem II assembly | 1.08E-02 |
| 94 | GO:0005985: sucrose metabolic process | 1.17E-02 |
| 95 | GO:0010030: positive regulation of seed germination | 1.17E-02 |
| 96 | GO:0016575: histone deacetylation | 1.46E-02 |
| 97 | GO:0006418: tRNA aminoacylation for protein translation | 1.46E-02 |
| 98 | GO:0061077: chaperone-mediated protein folding | 1.56E-02 |
| 99 | GO:0035428: hexose transmembrane transport | 1.67E-02 |
| 100 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.67E-02 |
| 101 | GO:0006012: galactose metabolic process | 1.77E-02 |
| 102 | GO:0009409: response to cold | 1.90E-02 |
| 103 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.99E-02 |
| 104 | GO:0048653: anther development | 2.11E-02 |
| 105 | GO:0042631: cellular response to water deprivation | 2.11E-02 |
| 106 | GO:0000413: protein peptidyl-prolyl isomerization | 2.11E-02 |
| 107 | GO:0006520: cellular amino acid metabolic process | 2.22E-02 |
| 108 | GO:0010197: polar nucleus fusion | 2.22E-02 |
| 109 | GO:0046323: glucose import | 2.22E-02 |
| 110 | GO:0019252: starch biosynthetic process | 2.46E-02 |
| 111 | GO:0002229: defense response to oomycetes | 2.58E-02 |
| 112 | GO:0006633: fatty acid biosynthetic process | 2.64E-02 |
| 113 | GO:1901657: glycosyl compound metabolic process | 2.83E-02 |
| 114 | GO:0030163: protein catabolic process | 2.83E-02 |
| 115 | GO:0010027: thylakoid membrane organization | 3.35E-02 |
| 116 | GO:0009414: response to water deprivation | 3.40E-02 |
| 117 | GO:0010411: xyloglucan metabolic process | 3.77E-02 |
| 118 | GO:0048481: plant ovule development | 4.05E-02 |
| 119 | GO:0000160: phosphorelay signal transduction system | 4.20E-02 |
| 120 | GO:0010311: lateral root formation | 4.20E-02 |
| 121 | GO:0010218: response to far red light | 4.34E-02 |
| 122 | GO:0010119: regulation of stomatal movement | 4.49E-02 |
| 123 | GO:0009637: response to blue light | 4.79E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 3 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 4 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 5 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 6 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 7 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 8 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 9 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 10 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 11 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 12 | GO:0005528: FK506 binding | 4.57E-08 |
| 13 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 9.19E-07 |
| 14 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.61E-05 |
| 15 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 2.60E-04 |
| 16 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 2.60E-04 |
| 17 | GO:0048038: quinone binding | 2.96E-04 |
| 18 | GO:0016168: chlorophyll binding | 5.18E-04 |
| 19 | GO:0003839: gamma-glutamylcyclotransferase activity | 5.74E-04 |
| 20 | GO:0004047: aminomethyltransferase activity | 5.74E-04 |
| 21 | GO:0033201: alpha-1,4-glucan synthase activity | 5.74E-04 |
| 22 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 5.74E-04 |
| 23 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 5.74E-04 |
| 24 | GO:0016868: intramolecular transferase activity, phosphotransferases | 5.74E-04 |
| 25 | GO:0016531: copper chaperone activity | 9.31E-04 |
| 26 | GO:0004373: glycogen (starch) synthase activity | 9.31E-04 |
| 27 | GO:0019829: cation-transporting ATPase activity | 9.31E-04 |
| 28 | GO:0002161: aminoacyl-tRNA editing activity | 9.31E-04 |
| 29 | GO:0004075: biotin carboxylase activity | 9.31E-04 |
| 30 | GO:0030267: glyoxylate reductase (NADP) activity | 9.31E-04 |
| 31 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 9.31E-04 |
| 32 | GO:0031409: pigment binding | 1.05E-03 |
| 33 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.33E-03 |
| 34 | GO:0019201: nucleotide kinase activity | 1.33E-03 |
| 35 | GO:0048487: beta-tubulin binding | 1.33E-03 |
| 36 | GO:0043023: ribosomal large subunit binding | 1.33E-03 |
| 37 | GO:0016836: hydro-lyase activity | 1.78E-03 |
| 38 | GO:0009011: starch synthase activity | 1.78E-03 |
| 39 | GO:0003989: acetyl-CoA carboxylase activity | 2.27E-03 |
| 40 | GO:0017137: Rab GTPase binding | 2.27E-03 |
| 41 | GO:0003959: NADPH dehydrogenase activity | 2.27E-03 |
| 42 | GO:0035673: oligopeptide transmembrane transporter activity | 2.80E-03 |
| 43 | GO:0008200: ion channel inhibitor activity | 2.80E-03 |
| 44 | GO:0051920: peroxiredoxin activity | 3.36E-03 |
| 45 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.36E-03 |
| 46 | GO:0004017: adenylate kinase activity | 3.36E-03 |
| 47 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 3.36E-03 |
| 48 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.36E-03 |
| 49 | GO:0015250: water channel activity | 4.08E-03 |
| 50 | GO:0016209: antioxidant activity | 4.60E-03 |
| 51 | GO:0004034: aldose 1-epimerase activity | 4.60E-03 |
| 52 | GO:0004033: aldo-keto reductase (NADP) activity | 4.60E-03 |
| 53 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 5.27E-03 |
| 54 | GO:0005375: copper ion transmembrane transporter activity | 5.27E-03 |
| 55 | GO:0005096: GTPase activator activity | 5.59E-03 |
| 56 | GO:0005384: manganese ion transmembrane transporter activity | 6.71E-03 |
| 57 | GO:0047372: acylglycerol lipase activity | 8.27E-03 |
| 58 | GO:0046872: metal ion binding | 8.89E-03 |
| 59 | GO:0008378: galactosyltransferase activity | 9.09E-03 |
| 60 | GO:0000049: tRNA binding | 9.09E-03 |
| 61 | GO:0015198: oligopeptide transporter activity | 9.09E-03 |
| 62 | GO:0008168: methyltransferase activity | 9.44E-03 |
| 63 | GO:0015293: symporter activity | 9.79E-03 |
| 64 | GO:0005509: calcium ion binding | 9.82E-03 |
| 65 | GO:0004565: beta-galactosidase activity | 9.94E-03 |
| 66 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 9.94E-03 |
| 67 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.94E-03 |
| 68 | GO:0004089: carbonate dehydratase activity | 9.94E-03 |
| 69 | GO:0015095: magnesium ion transmembrane transporter activity | 9.94E-03 |
| 70 | GO:0031072: heat shock protein binding | 9.94E-03 |
| 71 | GO:0051287: NAD binding | 1.06E-02 |
| 72 | GO:0008266: poly(U) RNA binding | 1.08E-02 |
| 73 | GO:0004407: histone deacetylase activity | 1.36E-02 |
| 74 | GO:0003714: transcription corepressor activity | 1.36E-02 |
| 75 | GO:0016787: hydrolase activity | 1.51E-02 |
| 76 | GO:0004176: ATP-dependent peptidase activity | 1.56E-02 |
| 77 | GO:0033612: receptor serine/threonine kinase binding | 1.56E-02 |
| 78 | GO:0022891: substrate-specific transmembrane transporter activity | 1.77E-02 |
| 79 | GO:0030570: pectate lyase activity | 1.77E-02 |
| 80 | GO:0016491: oxidoreductase activity | 1.81E-02 |
| 81 | GO:0003756: protein disulfide isomerase activity | 1.88E-02 |
| 82 | GO:0004812: aminoacyl-tRNA ligase activity | 1.99E-02 |
| 83 | GO:0004252: serine-type endopeptidase activity | 2.33E-02 |
| 84 | GO:0016853: isomerase activity | 2.34E-02 |
| 85 | GO:0005355: glucose transmembrane transporter activity | 2.34E-02 |
| 86 | GO:0050662: coenzyme binding | 2.34E-02 |
| 87 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.58E-02 |
| 88 | GO:0000156: phosphorelay response regulator activity | 2.83E-02 |
| 89 | GO:0008483: transaminase activity | 3.09E-02 |
| 90 | GO:0102483: scopolin beta-glucosidase activity | 3.77E-02 |
| 91 | GO:0004721: phosphoprotein phosphatase activity | 3.77E-02 |
| 92 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.77E-02 |
| 93 | GO:0008236: serine-type peptidase activity | 3.91E-02 |
| 94 | GO:0005215: transporter activity | 4.07E-02 |
| 95 | GO:0015238: drug transmembrane transporter activity | 4.20E-02 |
| 96 | GO:0004222: metalloendopeptidase activity | 4.34E-02 |
| 97 | GO:0003993: acid phosphatase activity | 4.94E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 1.54E-40 |
| 3 | GO:0009534: chloroplast thylakoid | 3.15E-31 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 9.11E-26 |
| 5 | GO:0009570: chloroplast stroma | 2.87E-20 |
| 6 | GO:0009941: chloroplast envelope | 4.88E-19 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 2.45E-17 |
| 8 | GO:0031977: thylakoid lumen | 1.10E-11 |
| 9 | GO:0009579: thylakoid | 7.76E-10 |
| 10 | GO:0010287: plastoglobule | 1.92E-08 |
| 11 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.41E-07 |
| 12 | GO:0009533: chloroplast stromal thylakoid | 3.64E-06 |
| 13 | GO:0030095: chloroplast photosystem II | 4.83E-05 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 9.40E-05 |
| 15 | GO:0031969: chloroplast membrane | 1.07E-04 |
| 16 | GO:0009782: photosystem I antenna complex | 2.60E-04 |
| 17 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 2.60E-04 |
| 18 | GO:0009344: nitrite reductase complex [NAD(P)H] | 2.60E-04 |
| 19 | GO:0019898: extrinsic component of membrane | 2.70E-04 |
| 20 | GO:0030076: light-harvesting complex | 9.50E-04 |
| 21 | GO:0042651: thylakoid membrane | 1.28E-03 |
| 22 | GO:0009531: secondary cell wall | 1.33E-03 |
| 23 | GO:0005960: glycine cleavage complex | 1.33E-03 |
| 24 | GO:0048046: apoplast | 2.33E-03 |
| 25 | GO:0009523: photosystem II | 2.64E-03 |
| 26 | GO:0009501: amyloplast | 4.60E-03 |
| 27 | GO:0042644: chloroplast nucleoid | 5.98E-03 |
| 28 | GO:0032040: small-subunit processome | 9.09E-03 |
| 29 | GO:0009508: plastid chromosome | 9.94E-03 |
| 30 | GO:0016020: membrane | 1.80E-02 |
| 31 | GO:0009522: photosystem I | 2.34E-02 |
| 32 | GO:0010319: stromule | 3.09E-02 |
| 33 | GO:0009295: nucleoid | 3.09E-02 |
| 34 | GO:0005887: integral component of plasma membrane | 3.13E-02 |
| 35 | GO:0046658: anchored component of plasma membrane | 3.84E-02 |
| 36 | GO:0016021: integral component of membrane | 4.57E-02 |