co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G01590

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0046719: regulation by virus of viral protein levels in host cell	0.00E+00
2	GO:0097056: selenocysteinyl-tRNA(Sec) biosynthetic process	8.86E-06
3	GO:0006434: seryl-tRNA aminoacylation	8.86E-06
4	GO:0018026: peptidyl-lysine monomethylation	2.38E-05
5	GO:0043039: tRNA aminoacylation	2.38E-05
6	GO:0009658: chloroplast organization	2.63E-05
7	GO:0006954: inflammatory response	4.33E-05
8	GO:0010027: thylakoid membrane organization	4.64E-05
9	GO:0016556: mRNA modification	6.64E-05
10	GO:0071483: cellular response to blue light	9.27E-05
11	GO:0006808: regulation of nitrogen utilization	9.27E-05
12	GO:0006564: L-serine biosynthetic process	1.21E-04
13	GO:0042793: transcription from plastid promoter	1.52E-04
14	GO:0071482: cellular response to light stimulus	2.91E-04
15	GO:0009073: aromatic amino acid family biosynthetic process	4.48E-04
16	GO:0006352: DNA-templated transcription, initiation	4.48E-04
17	GO:0090351: seedling development	6.20E-04
18	GO:0007005: mitochondrion organization	8.54E-04
19	GO:0009416: response to light stimulus	1.80E-03
20	GO:0048481: plant ovule development	1.92E-03
21	GO:0045087: innate immune response	2.25E-03
22	GO:0051707: response to other organism	2.67E-03
23	GO:0006364: rRNA processing	3.26E-03
24	GO:0009790: embryo development	5.37E-03
25	GO:0005975: carbohydrate metabolic process	5.43E-03
26	GO:0008380: RNA splicing	6.81E-03
27	GO:0009737: response to abscisic acid	7.61E-03
28	GO:0009793: embryo development ending in seed dormancy	8.27E-03
29	GO:0032259: methylation	1.21E-02
30	GO:0009408: response to heat	1.25E-02
31	GO:0006397: mRNA processing	1.29E-02
32	GO:0009735: response to cytokinin	1.76E-02
33	GO:0006412: translation	1.87E-02
34	GO:0006952: defense response	1.99E-02
35	GO:0045893: positive regulation of transcription, DNA-templated	2.07E-02
36	GO:0006457: protein folding	2.25E-02
37	GO:0055114: oxidation-reduction process	2.94E-02
38	GO:0071555: cell wall organization	3.10E-02
39	GO:0015031: protein transport	3.68E-02
40	GO:0009409: response to cold	3.85E-02

Rank	GO Term	Adjusted P value
1	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.34E-06
2	GO:0008266: poly(U) RNA binding	6.34E-06
3	GO:0004828: serine-tRNA ligase activity	8.86E-06
4	GO:0004617: phosphoglycerate dehydrogenase activity	2.38E-05
5	GO:0017150: tRNA dihydrouridine synthase activity	4.33E-05
6	GO:0016279: protein-lysine N-methyltransferase activity	9.27E-05
7	GO:0001053: plastid sigma factor activity	9.27E-05
8	GO:0016987: sigma factor activity	9.27E-05
9	GO:0031072: heat shock protein binding	5.33E-04
10	GO:0000287: magnesium ion binding	5.74E-04
11	GO:0003723: RNA binding	9.05E-04
12	GO:0003727: single-stranded RNA binding	9.51E-04
13	GO:0016597: amino acid binding	1.55E-03
14	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.36E-03
15	GO:0051287: NAD binding	3.03E-03
16	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	3.26E-03
17	GO:0051082: unfolded protein binding	4.15E-03
18	GO:0019843: rRNA binding	4.83E-03
19	GO:0003729: mRNA binding	5.32E-03
20	GO:0003735: structural constituent of ribosome	7.11E-03
21	GO:0008168: methyltransferase activity	7.95E-03
22	GO:0050660: flavin adenine dinucleotide binding	9.03E-03
23	GO:0003924: GTPase activity	1.25E-02
24	GO:0004519: endonuclease activity	1.32E-02
25	GO:0005525: GTP binding	2.67E-02
26	GO:0016491: oxidoreductase activity	3.78E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	3.41E-11
2	GO:0009547: plastid ribosome	8.86E-06
3	GO:0000427: plastid-encoded plastid RNA polymerase complex	2.38E-05
4	GO:0009570: chloroplast stroma	9.23E-05
5	GO:0009535: chloroplast thylakoid membrane	1.23E-04
6	GO:0009579: thylakoid	1.98E-04
7	GO:0009534: chloroplast thylakoid	2.01E-04
8	GO:0000311: plastid large ribosomal subunit	4.90E-04
9	GO:0009508: plastid chromosome	5.33E-04
10	GO:0010319: stromule	1.49E-03
11	GO:0009295: nucleoid	1.49E-03
12	GO:0030529: intracellular ribonucleoprotein complex	1.61E-03
13	GO:0009941: chloroplast envelope	2.74E-03
14	GO:0005840: ribosome	3.76E-03
15	GO:0009706: chloroplast inner membrane	4.15E-03
16	GO:0009543: chloroplast thylakoid lumen	4.83E-03
17	GO:0046658: anchored component of plasma membrane	7.32E-03
18	GO:0022625: cytosolic large ribosomal subunit	9.83E-03
19	GO:0043231: intracellular membrane-bounded organelle	1.34E-02
20	GO:0022626: cytosolic ribosome	1.82E-02
21	GO:0031225: anchored component of membrane	2.57E-02
22	GO:0009536: plastid	3.59E-02