Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G01540

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070212: protein poly-ADP-ribosylation0.00E+00
2GO:0043201: response to leucine0.00E+00
3GO:0042430: indole-containing compound metabolic process0.00E+00
4GO:0080053: response to phenylalanine0.00E+00
5GO:0002376: immune system process0.00E+00
6GO:0080052: response to histidine0.00E+00
7GO:2000541: positive regulation of protein geranylgeranylation0.00E+00
8GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
9GO:0006182: cGMP biosynthetic process0.00E+00
10GO:0072722: response to amitrole0.00E+00
11GO:0042742: defense response to bacterium9.38E-12
12GO:0009617: response to bacterium3.84E-10
13GO:0009751: response to salicylic acid3.42E-07
14GO:0006979: response to oxidative stress1.24E-06
15GO:0034976: response to endoplasmic reticulum stress1.82E-06
16GO:0006952: defense response2.91E-05
17GO:0006468: protein phosphorylation3.87E-05
18GO:0009626: plant-type hypersensitive response3.88E-05
19GO:0002237: response to molecule of bacterial origin4.53E-05
20GO:0006457: protein folding6.94E-05
21GO:0009697: salicylic acid biosynthetic process7.01E-05
22GO:0010200: response to chitin1.06E-04
23GO:0071456: cellular response to hypoxia1.17E-04
24GO:0042542: response to hydrogen peroxide1.38E-04
25GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.41E-04
26GO:0010150: leaf senescence1.65E-04
27GO:1900056: negative regulation of leaf senescence1.85E-04
28GO:0030091: protein repair2.35E-04
29GO:0006102: isocitrate metabolic process2.35E-04
30GO:0051938: L-glutamate import2.53E-04
31GO:1990641: response to iron ion starvation2.53E-04
32GO:0010726: positive regulation of hydrogen peroxide metabolic process2.53E-04
33GO:0010421: hydrogen peroxide-mediated programmed cell death2.53E-04
34GO:0009270: response to humidity2.53E-04
35GO:0050691: regulation of defense response to virus by host2.53E-04
36GO:0046244: salicylic acid catabolic process2.53E-04
37GO:0034975: protein folding in endoplasmic reticulum2.53E-04
38GO:0010193: response to ozone2.81E-04
39GO:0010120: camalexin biosynthetic process2.90E-04
40GO:0051865: protein autoubiquitination3.51E-04
41GO:0055114: oxidation-reduction process4.37E-04
42GO:0009627: systemic acquired resistance5.27E-04
43GO:0009866: induced systemic resistance, ethylene mediated signaling pathway5.59E-04
44GO:0006101: citrate metabolic process5.59E-04
45GO:0015865: purine nucleotide transport5.59E-04
46GO:0044419: interspecies interaction between organisms5.59E-04
47GO:0042939: tripeptide transport5.59E-04
48GO:0030003: cellular cation homeostasis5.59E-04
49GO:0019725: cellular homeostasis5.59E-04
50GO:0043132: NAD transport5.59E-04
51GO:0043091: L-arginine import5.59E-04
52GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.59E-04
53GO:0015802: basic amino acid transport5.59E-04
54GO:0009682: induced systemic resistance5.62E-04
55GO:0000272: polysaccharide catabolic process5.62E-04
56GO:0012501: programmed cell death6.42E-04
57GO:0009817: defense response to fungus, incompatible interaction6.42E-04
58GO:0046686: response to cadmium ion7.64E-04
59GO:0010272: response to silver ion9.07E-04
60GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway9.07E-04
61GO:0010581: regulation of starch biosynthetic process9.07E-04
62GO:0044375: regulation of peroxisome size9.07E-04
63GO:0045793: positive regulation of cell size9.07E-04
64GO:0010186: positive regulation of cellular defense response9.07E-04
65GO:0009863: salicylic acid mediated signaling pathway1.12E-03
66GO:0002239: response to oomycetes1.29E-03
67GO:0046902: regulation of mitochondrial membrane permeability1.29E-03
68GO:0015858: nucleoside transport1.29E-03
69GO:0002679: respiratory burst involved in defense response1.29E-03
70GO:0010116: positive regulation of abscisic acid biosynthetic process1.29E-03
71GO:0016998: cell wall macromolecule catabolic process1.35E-03
72GO:0031348: negative regulation of defense response1.48E-03
73GO:0031347: regulation of defense response1.50E-03
74GO:0042938: dipeptide transport1.73E-03
75GO:0080037: negative regulation of cytokinin-activated signaling pathway1.73E-03
76GO:0060548: negative regulation of cell death1.73E-03
77GO:0010118: stomatal movement2.05E-03
78GO:0018344: protein geranylgeranylation2.21E-03
79GO:0010225: response to UV-C2.21E-03
80GO:0000304: response to singlet oxygen2.21E-03
81GO:0034052: positive regulation of plant-type hypersensitive response2.21E-03
82GO:2000762: regulation of phenylpropanoid metabolic process2.21E-03
83GO:0006097: glyoxylate cycle2.21E-03
84GO:0009620: response to fungus2.40E-03
85GO:0010256: endomembrane system organization2.72E-03
86GO:0000302: response to reactive oxygen species2.72E-03
87GO:0002229: defense response to oomycetes2.72E-03
88GO:0018258: protein O-linked glycosylation via hydroxyproline2.72E-03
89GO:0002238: response to molecule of fungal origin2.72E-03
90GO:0006561: proline biosynthetic process2.72E-03
91GO:0010942: positive regulation of cell death2.72E-03
92GO:0010405: arabinogalactan protein metabolic process2.72E-03
93GO:0030163: protein catabolic process3.09E-03
94GO:0042372: phylloquinone biosynthetic process3.27E-03
95GO:0006120: mitochondrial electron transport, NADH to ubiquinone3.27E-03
96GO:0009567: double fertilization forming a zygote and endosperm3.29E-03
97GO:0045454: cell redox homeostasis3.54E-03
98GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c3.86E-03
99GO:0019745: pentacyclic triterpenoid biosynthetic process3.86E-03
100GO:1902074: response to salt3.86E-03
101GO:0009615: response to virus3.92E-03
102GO:0009850: auxin metabolic process4.48E-03
103GO:0043068: positive regulation of programmed cell death4.48E-03
104GO:0030162: regulation of proteolysis4.48E-03
105GO:0008219: cell death5.11E-03
106GO:0009699: phenylpropanoid biosynthetic process5.13E-03
107GO:0030968: endoplasmic reticulum unfolded protein response5.13E-03
108GO:0009808: lignin metabolic process5.13E-03
109GO:0006499: N-terminal protein myristoylation5.63E-03
110GO:0007338: single fertilization5.81E-03
111GO:0046685: response to arsenic-containing substance5.81E-03
112GO:0006098: pentose-phosphate shunt5.81E-03
113GO:0010112: regulation of systemic acquired resistance5.81E-03
114GO:0009060: aerobic respiration5.81E-03
115GO:0043067: regulation of programmed cell death6.52E-03
116GO:0030042: actin filament depolymerization6.52E-03
117GO:0048354: mucilage biosynthetic process involved in seed coat development6.52E-03
118GO:0008202: steroid metabolic process6.52E-03
119GO:0006099: tricarboxylic acid cycle6.77E-03
120GO:0009870: defense response signaling pathway, resistance gene-dependent7.26E-03
121GO:0006032: chitin catabolic process7.26E-03
122GO:0009688: abscisic acid biosynthetic process7.26E-03
123GO:0006839: mitochondrial transport7.38E-03
124GO:0006816: calcium ion transport8.04E-03
125GO:0016485: protein processing8.04E-03
126GO:0051707: response to other organism8.35E-03
127GO:0006790: sulfur compound metabolic process8.83E-03
128GO:0015706: nitrate transport8.83E-03
129GO:0002213: defense response to insect8.83E-03
130GO:0009718: anthocyanin-containing compound biosynthetic process9.66E-03
131GO:0010075: regulation of meristem growth9.66E-03
132GO:0006094: gluconeogenesis9.66E-03
133GO:0006855: drug transmembrane transport9.76E-03
134GO:0042538: hyperosmotic salinity response1.05E-02
135GO:0009266: response to temperature stimulus1.05E-02
136GO:0009934: regulation of meristem structural organization1.05E-02
137GO:0006486: protein glycosylation1.13E-02
138GO:0042343: indole glucosinolate metabolic process1.14E-02
139GO:0010167: response to nitrate1.14E-02
140GO:0046854: phosphatidylinositol phosphorylation1.14E-02
141GO:0009651: response to salt stress1.27E-02
142GO:0030150: protein import into mitochondrial matrix1.32E-02
143GO:0005992: trehalose biosynthetic process1.32E-02
144GO:0007165: signal transduction1.33E-02
145GO:0006096: glycolytic process1.34E-02
146GO:0044550: secondary metabolite biosynthetic process1.38E-02
147GO:0006874: cellular calcium ion homeostasis1.42E-02
148GO:0003333: amino acid transmembrane transport1.52E-02
149GO:0098542: defense response to other organism1.52E-02
150GO:0009624: response to nematode1.61E-02
151GO:0019748: secondary metabolic process1.62E-02
152GO:0009411: response to UV1.72E-02
153GO:0010227: floral organ abscission1.72E-02
154GO:0010584: pollen exine formation1.83E-02
155GO:0009306: protein secretion1.83E-02
156GO:0032259: methylation1.92E-02
157GO:0048868: pollen tube development2.16E-02
158GO:0048544: recognition of pollen2.27E-02
159GO:0042752: regulation of circadian rhythm2.27E-02
160GO:0009851: auxin biosynthetic process2.39E-02
161GO:0050832: defense response to fungus2.60E-02
162GO:0007264: small GTPase mediated signal transduction2.63E-02
163GO:0006508: proteolysis2.77E-02
164GO:0010252: auxin homeostasis2.87E-02
165GO:0006464: cellular protein modification process2.87E-02
166GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.12E-02
167GO:0007166: cell surface receptor signaling pathway3.19E-02
168GO:0009414: response to water deprivation3.20E-02
169GO:0009816: defense response to bacterium, incompatible interaction3.39E-02
170GO:0042128: nitrate assimilation3.52E-02
171GO:0016311: dephosphorylation3.80E-02
172GO:0009407: toxin catabolic process4.22E-02
173GO:0009611: response to wounding4.25E-02
174GO:0048527: lateral root development4.36E-02
175GO:0010043: response to zinc ion4.36E-02
176GO:0007568: aging4.36E-02
177GO:0045087: innate immune response4.66E-02
178GO:0015031: protein transport4.69E-02
RankGO TermAdjusted P value
1GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
2GO:0051670: inulinase activity0.00E+00
3GO:0047720: indoleacetaldoxime dehydratase activity0.00E+00
4GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
5GO:0005092: GDP-dissociation inhibitor activity0.00E+00
6GO:0044610: FMN transmembrane transporter activity0.00E+00
7GO:0004674: protein serine/threonine kinase activity3.37E-06
8GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.49E-06
9GO:0016301: kinase activity4.88E-06
10GO:0003756: protein disulfide isomerase activity6.49E-06
11GO:0047631: ADP-ribose diphosphatase activity7.01E-05
12GO:0000210: NAD+ diphosphatase activity1.02E-04
13GO:0033743: peptide-methionine (R)-S-oxide reductase activity1.41E-04
14GO:0080042: ADP-glucose pyrophosphohydrolase activity2.53E-04
15GO:0051669: fructan beta-fructosidase activity2.53E-04
16GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity2.53E-04
17GO:0008909: isochorismate synthase activity2.53E-04
18GO:0015230: FAD transmembrane transporter activity2.53E-04
19GO:0031219: levanase activity2.53E-04
20GO:0009055: electron carrier activity2.79E-04
21GO:0005524: ATP binding3.44E-04
22GO:0050660: flavin adenine dinucleotide binding5.00E-04
23GO:0003994: aconitate hydratase activity5.59E-04
24GO:0051724: NAD transporter activity5.59E-04
25GO:0017110: nucleoside-diphosphatase activity5.59E-04
26GO:0032934: sterol binding5.59E-04
27GO:0042937: tripeptide transporter activity5.59E-04
28GO:0008517: folic acid transporter activity5.59E-04
29GO:0015228: coenzyme A transmembrane transporter activity5.59E-04
30GO:0080041: ADP-ribose pyrophosphohydrolase activity5.59E-04
31GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity9.07E-04
32GO:0004383: guanylate cyclase activity9.07E-04
33GO:0000030: mannosyltransferase activity9.07E-04
34GO:0005093: Rab GDP-dissociation inhibitor activity9.07E-04
35GO:0015189: L-lysine transmembrane transporter activity1.29E-03
36GO:0035529: NADH pyrophosphatase activity1.29E-03
37GO:0015181: arginine transmembrane transporter activity1.29E-03
38GO:0004449: isocitrate dehydrogenase (NAD+) activity1.29E-03
39GO:0010178: IAA-amino acid conjugate hydrolase activity1.29E-03
40GO:0042299: lupeol synthase activity1.29E-03
41GO:0004298: threonine-type endopeptidase activity1.35E-03
42GO:0042936: dipeptide transporter activity1.73E-03
43GO:0005313: L-glutamate transmembrane transporter activity1.73E-03
44GO:0004031: aldehyde oxidase activity1.73E-03
45GO:0050302: indole-3-acetaldehyde oxidase activity1.73E-03
46GO:0016866: intramolecular transferase activity1.73E-03
47GO:0010279: indole-3-acetic acid amido synthetase activity1.73E-03
48GO:0080122: AMP transmembrane transporter activity2.21E-03
49GO:0017137: Rab GTPase binding2.21E-03
50GO:0005471: ATP:ADP antiporter activity2.21E-03
51GO:0051082: unfolded protein binding2.69E-03
52GO:1990714: hydroxyproline O-galactosyltransferase activity2.72E-03
53GO:0004332: fructose-bisphosphate aldolase activity2.72E-03
54GO:0004029: aldehyde dehydrogenase (NAD) activity2.72E-03
55GO:0102229: amylopectin maltohydrolase activity2.72E-03
56GO:0015217: ADP transmembrane transporter activity3.27E-03
57GO:0051920: peroxiredoxin activity3.27E-03
58GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.27E-03
59GO:0016161: beta-amylase activity3.27E-03
60GO:0005261: cation channel activity3.27E-03
61GO:0005347: ATP transmembrane transporter activity3.27E-03
62GO:0008113: peptide-methionine (S)-S-oxide reductase activity3.27E-03
63GO:0008237: metallopeptidase activity3.49E-03
64GO:0008320: protein transmembrane transporter activity3.86E-03
65GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.98E-03
66GO:0005544: calcium-dependent phospholipid binding4.48E-03
67GO:0016209: antioxidant activity4.48E-03
68GO:0030247: polysaccharide binding4.61E-03
69GO:0004683: calmodulin-dependent protein kinase activity4.61E-03
70GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.86E-03
71GO:0008142: oxysterol binding5.13E-03
72GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.52E-03
73GO:0004743: pyruvate kinase activity6.52E-03
74GO:0015174: basic amino acid transmembrane transporter activity6.52E-03
75GO:0045309: protein phosphorylated amino acid binding6.52E-03
76GO:0030955: potassium ion binding6.52E-03
77GO:0015112: nitrate transmembrane transporter activity6.52E-03
78GO:0004568: chitinase activity7.26E-03
79GO:0008171: O-methyltransferase activity7.26E-03
80GO:0051539: 4 iron, 4 sulfur cluster binding7.38E-03
81GO:0019904: protein domain specific binding8.04E-03
82GO:0008559: xenobiotic-transporting ATPase activity8.04E-03
83GO:0008378: galactosyltransferase activity8.83E-03
84GO:0005509: calcium ion binding9.14E-03
85GO:0015266: protein channel activity9.66E-03
86GO:0004022: alcohol dehydrogenase (NAD) activity9.66E-03
87GO:0005262: calcium channel activity9.66E-03
88GO:0051287: NAD binding1.01E-02
89GO:0005506: iron ion binding1.02E-02
90GO:0043531: ADP binding1.06E-02
91GO:0008061: chitin binding1.14E-02
92GO:0004970: ionotropic glutamate receptor activity1.14E-02
93GO:0005217: intracellular ligand-gated ion channel activity1.14E-02
94GO:0008233: peptidase activity1.21E-02
95GO:0043565: sequence-specific DNA binding1.26E-02
96GO:0015035: protein disulfide oxidoreductase activity1.66E-02
97GO:0016491: oxidoreductase activity1.69E-02
98GO:0030246: carbohydrate binding1.82E-02
99GO:0016758: transferase activity, transferring hexosyl groups1.97E-02
100GO:0019825: oxygen binding1.98E-02
101GO:0008080: N-acetyltransferase activity2.16E-02
102GO:0016853: isomerase activity2.27E-02
103GO:0048038: quinone binding2.51E-02
104GO:0008137: NADH dehydrogenase (ubiquinone) activity2.51E-02
105GO:0004197: cysteine-type endopeptidase activity2.63E-02
106GO:0015297: antiporter activity2.66E-02
107GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.75E-02
108GO:0008194: UDP-glycosyltransferase activity3.12E-02
109GO:0051213: dioxygenase activity3.26E-02
110GO:0009931: calcium-dependent protein serine/threonine kinase activity3.52E-02
111GO:0042802: identical protein binding3.54E-02
112GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity3.93E-02
113GO:0015238: drug transmembrane transporter activity4.08E-02
114GO:0005096: GTPase activator activity4.08E-02
115GO:0008168: methyltransferase activity4.14E-02
116GO:0004222: metalloendopeptidase activity4.22E-02
117GO:0030145: manganese ion binding4.36E-02
118GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.66E-02
119GO:0000987: core promoter proximal region sequence-specific DNA binding4.80E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005886: plasma membrane1.29E-08
3GO:0005788: endoplasmic reticulum lumen5.18E-08
4GO:0005783: endoplasmic reticulum2.07E-07
5GO:0005829: cytosol4.60E-04
6GO:0030134: ER to Golgi transport vesicle5.59E-04
7GO:0046861: glyoxysomal membrane9.07E-04
8GO:0005968: Rab-protein geranylgeranyltransferase complex1.29E-03
9GO:0005839: proteasome core complex1.35E-03
10GO:0005741: mitochondrial outer membrane1.35E-03
11GO:0000502: proteasome complex1.72E-03
12GO:0005801: cis-Golgi network3.27E-03
13GO:0005576: extracellular region3.61E-03
14GO:0031305: integral component of mitochondrial inner membrane4.48E-03
15GO:0009514: glyoxysome5.13E-03
16GO:0019773: proteasome core complex, alpha-subunit complex5.13E-03
17GO:0005779: integral component of peroxisomal membrane5.13E-03
18GO:0000326: protein storage vacuole5.13E-03
19GO:0000325: plant-type vacuole5.91E-03
20GO:0016021: integral component of membrane6.71E-03
21GO:0005740: mitochondrial envelope7.26E-03
22GO:0008541: proteasome regulatory particle, lid subcomplex8.04E-03
23GO:0005750: mitochondrial respiratory chain complex III1.05E-02
24GO:0005758: mitochondrial intermembrane space1.32E-02
25GO:0048046: apoplast1.51E-02
26GO:0015629: actin cytoskeleton1.72E-02
27GO:0005744: mitochondrial inner membrane presequence translocase complex1.83E-02
28GO:0005743: mitochondrial inner membrane1.85E-02
29GO:0005759: mitochondrial matrix2.54E-02
30GO:0016592: mediator complex2.63E-02
31GO:0005737: cytoplasm2.84E-02
32GO:0005778: peroxisomal membrane3.00E-02
33GO:0005774: vacuolar membrane3.45E-02
34GO:0019005: SCF ubiquitin ligase complex3.93E-02
35GO:0009505: plant-type cell wall4.59E-02
36GO:0016020: membrane4.87E-02
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Gene type



Gene DE type