co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G01090

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015805: S-adenosyl-L-methionine transport	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0035970: peptidyl-threonine dephosphorylation	0.00E+00
4	GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process	0.00E+00
5	GO:0008064: regulation of actin polymerization or depolymerization	0.00E+00
6	GO:0051493: regulation of cytoskeleton organization	0.00E+00
7	GO:0045014: negative regulation of transcription by glucose	0.00E+00
8	GO:0006780: uroporphyrinogen III biosynthetic process	0.00E+00
9	GO:0045176: apical protein localization	0.00E+00
10	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	9.44E-09
11	GO:0008610: lipid biosynthetic process	1.61E-05
12	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	9.53E-05
13	GO:0048443: stamen development	3.75E-04
14	GO:0007263: nitric oxide mediated signal transduction	3.99E-04
15	GO:0015808: L-alanine transport	3.99E-04
16	GO:0043266: regulation of potassium ion transport	3.99E-04
17	GO:0006824: cobalt ion transport	3.99E-04
18	GO:0010480: microsporocyte differentiation	3.99E-04
19	GO:0031338: regulation of vesicle fusion	3.99E-04
20	GO:0006723: cuticle hydrocarbon biosynthetic process	3.99E-04
21	GO:0080051: cutin transport	3.99E-04
22	GO:2000021: regulation of ion homeostasis	3.99E-04
23	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	3.99E-04
24	GO:0070509: calcium ion import	3.99E-04
25	GO:0071554: cell wall organization or biogenesis	6.67E-04
26	GO:0006468: protein phosphorylation	7.44E-04
27	GO:0015908: fatty acid transport	8.66E-04
28	GO:0045717: negative regulation of fatty acid biosynthetic process	8.66E-04
29	GO:0010541: acropetal auxin transport	8.66E-04
30	GO:0034755: iron ion transmembrane transport	8.66E-04
31	GO:0098712: L-glutamate import across plasma membrane	8.66E-04
32	GO:0010289: homogalacturonan biosynthetic process	8.66E-04
33	GO:0010270: photosystem II oxygen evolving complex assembly	8.66E-04
34	GO:0015804: neutral amino acid transport	8.66E-04
35	GO:0010198: synergid death	8.66E-04
36	GO:0006695: cholesterol biosynthetic process	8.66E-04
37	GO:0010115: regulation of abscisic acid biosynthetic process	8.66E-04
38	GO:0006816: calcium ion transport	1.07E-03
39	GO:0010152: pollen maturation	1.22E-03
40	GO:0015995: chlorophyll biosynthetic process	1.30E-03
41	GO:0043447: alkane biosynthetic process	1.40E-03
42	GO:0006518: peptide metabolic process	1.40E-03
43	GO:0010160: formation of animal organ boundary	1.40E-03
44	GO:0090630: activation of GTPase activity	1.40E-03
45	GO:2001295: malonyl-CoA biosynthetic process	1.40E-03
46	GO:1902448: positive regulation of shade avoidance	1.40E-03
47	GO:0010540: basipetal auxin transport	1.56E-03
48	GO:0016310: phosphorylation	1.69E-03
49	GO:0006833: water transport	1.95E-03
50	GO:0010025: wax biosynthetic process	1.95E-03
51	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	2.03E-03
52	GO:0007231: osmosensory signaling pathway	2.03E-03
53	GO:0051639: actin filament network formation	2.03E-03
54	GO:0034059: response to anoxia	2.03E-03
55	GO:0080170: hydrogen peroxide transmembrane transport	2.03E-03
56	GO:0043481: anthocyanin accumulation in tissues in response to UV light	2.03E-03
57	GO:0006633: fatty acid biosynthetic process	2.41E-03
58	GO:0016998: cell wall macromolecule catabolic process	2.62E-03
59	GO:0000919: cell plate assembly	2.73E-03
60	GO:0010021: amylopectin biosynthetic process	2.73E-03
61	GO:0010222: stem vascular tissue pattern formation	2.73E-03
62	GO:0051764: actin crosslink formation	2.73E-03
63	GO:0006085: acetyl-CoA biosynthetic process	2.73E-03
64	GO:0033500: carbohydrate homeostasis	2.73E-03
65	GO:0031122: cytoplasmic microtubule organization	2.73E-03
66	GO:0042546: cell wall biogenesis	2.91E-03
67	GO:0009416: response to light stimulus	3.01E-03
68	GO:0016120: carotene biosynthetic process	3.49E-03
69	GO:0000304: response to singlet oxygen	3.49E-03
70	GO:0016042: lipid catabolic process	3.51E-03
71	GO:0042335: cuticle development	3.99E-03
72	GO:0034220: ion transmembrane transport	3.99E-03
73	GO:0010182: sugar mediated signaling pathway	4.30E-03
74	GO:0009958: positive gravitropism	4.30E-03
75	GO:0006828: manganese ion transport	4.32E-03
76	GO:0018258: protein O-linked glycosylation via hydroxyproline	4.32E-03
77	GO:0006561: proline biosynthetic process	4.32E-03
78	GO:0010405: arabinogalactan protein metabolic process	4.32E-03
79	GO:0006751: glutathione catabolic process	4.32E-03
80	GO:0048827: phyllome development	4.32E-03
81	GO:0042549: photosystem II stabilization	4.32E-03
82	GO:0010256: endomembrane system organization	4.32E-03
83	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	4.32E-03
84	GO:0009913: epidermal cell differentiation	4.32E-03
85	GO:0060918: auxin transport	4.32E-03
86	GO:0006796: phosphate-containing compound metabolic process	4.32E-03
87	GO:0006694: steroid biosynthetic process	5.20E-03
88	GO:2000033: regulation of seed dormancy process	5.20E-03
89	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	5.20E-03
90	GO:0007264: small GTPase mediated signal transduction	5.67E-03
91	GO:0071669: plant-type cell wall organization or biogenesis	6.15E-03
92	GO:0006955: immune response	6.15E-03
93	GO:0043090: amino acid import	6.15E-03
94	GO:0048437: floral organ development	6.15E-03
95	GO:0010928: regulation of auxin mediated signaling pathway	7.15E-03
96	GO:0010027: thylakoid membrane organization	7.69E-03
97	GO:0016126: sterol biosynthetic process	7.69E-03
98	GO:0007165: signal transduction	7.69E-03
99	GO:0009657: plastid organization	8.21E-03
100	GO:0009808: lignin metabolic process	8.21E-03
101	GO:0071482: cellular response to light stimulus	8.21E-03
102	GO:0010411: xyloglucan metabolic process	9.07E-03
103	GO:0033384: geranyl diphosphate biosynthetic process	9.31E-03
104	GO:0048589: developmental growth	9.31E-03
105	GO:0045337: farnesyl diphosphate biosynthetic process	9.31E-03
106	GO:0030244: cellulose biosynthetic process	1.01E-02
107	GO:0005975: carbohydrate metabolic process	1.01E-02
108	GO:0009638: phototropism	1.05E-02
109	GO:0006779: porphyrin-containing compound biosynthetic process	1.05E-02
110	GO:0009834: plant-type secondary cell wall biogenesis	1.11E-02
111	GO:0006782: protoporphyrinogen IX biosynthetic process	1.17E-02
112	GO:0019538: protein metabolic process	1.17E-02
113	GO:0009688: abscisic acid biosynthetic process	1.17E-02
114	GO:0010215: cellulose microfibril organization	1.17E-02
115	GO:0010162: seed dormancy process	1.17E-02
116	GO:0071555: cell wall organization	1.20E-02
117	GO:0045490: pectin catabolic process	1.28E-02
118	GO:1903507: negative regulation of nucleic acid-templated transcription	1.29E-02
119	GO:0006415: translational termination	1.29E-02
120	GO:0009750: response to fructose	1.29E-02
121	GO:0018119: peptidyl-cysteine S-nitrosylation	1.29E-02
122	GO:0048229: gametophyte development	1.29E-02
123	GO:0046856: phosphatidylinositol dephosphorylation	1.29E-02
124	GO:0000038: very long-chain fatty acid metabolic process	1.29E-02
125	GO:0006629: lipid metabolic process	1.36E-02
126	GO:0008361: regulation of cell size	1.43E-02
127	GO:0006820: anion transport	1.43E-02
128	GO:0010102: lateral root morphogenesis	1.56E-02
129	GO:0009785: blue light signaling pathway	1.56E-02
130	GO:0010229: inflorescence development	1.56E-02
131	GO:0009718: anthocyanin-containing compound biosynthetic process	1.56E-02
132	GO:0010075: regulation of meristem growth	1.56E-02
133	GO:0009725: response to hormone	1.56E-02
134	GO:0010588: cotyledon vascular tissue pattern formation	1.56E-02
135	GO:0030048: actin filament-based movement	1.56E-02
136	GO:0008152: metabolic process	1.58E-02
137	GO:0009934: regulation of meristem structural organization	1.70E-02
138	GO:0048768: root hair cell tip growth	1.70E-02
139	GO:0010030: positive regulation of seed germination	1.84E-02
140	GO:0070588: calcium ion transmembrane transport	1.84E-02
141	GO:0009825: multidimensional cell growth	1.84E-02
142	GO:0051017: actin filament bundle assembly	2.14E-02
143	GO:0008299: isoprenoid biosynthetic process	2.30E-02
144	GO:0006857: oligopeptide transport	2.39E-02
145	GO:0031408: oxylipin biosynthetic process	2.46E-02
146	GO:2000022: regulation of jasmonic acid mediated signaling pathway	2.63E-02
147	GO:0035428: hexose transmembrane transport	2.63E-02
148	GO:0009306: protein secretion	2.96E-02
149	GO:0042545: cell wall modification	3.08E-02
150	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	3.14E-02
151	GO:0046777: protein autophosphorylation	3.16E-02
152	GO:0009414: response to water deprivation	3.21E-02
153	GO:0000271: polysaccharide biosynthetic process	3.32E-02
154	GO:0042391: regulation of membrane potential	3.32E-02
155	GO:0000413: protein peptidyl-prolyl isomerization	3.32E-02
156	GO:0048653: anther development	3.32E-02
157	GO:0042631: cellular response to water deprivation	3.32E-02
158	GO:0046323: glucose import	3.50E-02
159	GO:0008360: regulation of cell shape	3.50E-02
160	GO:0048825: cotyledon development	3.87E-02
161	GO:0019252: starch biosynthetic process	3.87E-02
162	GO:0009733: response to auxin	4.04E-02
163	GO:0016132: brassinosteroid biosynthetic process	4.07E-02
164	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	4.07E-02
165	GO:0048235: pollen sperm cell differentiation	4.26E-02
166	GO:0010583: response to cyclopentenone	4.26E-02
167	GO:0016125: sterol metabolic process	4.66E-02
168	GO:0009639: response to red or far red light	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity	0.00E+00
2	GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity	0.00E+00
3	GO:0004852: uroporphyrinogen-III synthase activity	0.00E+00
4	GO:1990534: thermospermine oxidase activity	0.00E+00
5	GO:0102193: protein-ribulosamine 3-kinase activity	0.00E+00
6	GO:0050614: delta24-sterol reductase activity	0.00E+00
7	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
8	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
9	GO:0038198: auxin receptor activity	0.00E+00
10	GO:0004496: mevalonate kinase activity	0.00E+00
11	GO:0010301: xanthoxin dehydrogenase activity	0.00E+00
12	GO:0016301: kinase activity	5.08E-05
13	GO:0010011: auxin binding	9.53E-05
14	GO:0004565: beta-galactosidase activity	1.03E-04
15	GO:0052689: carboxylic ester hydrolase activity	1.11E-04
16	GO:0004674: protein serine/threonine kinase activity	1.22E-04
17	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	2.85E-04
18	GO:0016788: hydrolase activity, acting on ester bonds	2.91E-04
19	GO:0004163: diphosphomevalonate decarboxylase activity	3.99E-04
20	GO:0015245: fatty acid transporter activity	3.99E-04
21	GO:0004328: formamidase activity	3.99E-04
22	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	3.99E-04
23	GO:0047381: dodecanoyl-[acyl-carrier-protein] hydrolase activity	3.99E-04
24	GO:0050139: nicotinate-N-glucosyltransferase activity	3.99E-04
25	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	3.99E-04
26	GO:0005227: calcium activated cation channel activity	3.99E-04
27	GO:0015194: L-serine transmembrane transporter activity	3.99E-04
28	GO:0042834: peptidoglycan binding	3.99E-04
29	GO:0004856: xylulokinase activity	3.99E-04
30	GO:0008568: microtubule-severing ATPase activity	3.99E-04
31	GO:0004033: aldo-keto reductase (NADP) activity	4.62E-04
32	GO:0005516: calmodulin binding	6.64E-04
33	GO:0005524: ATP binding	8.40E-04
34	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	8.66E-04
35	GO:0015180: L-alanine transmembrane transporter activity	8.66E-04
36	GO:0000822: inositol hexakisphosphate binding	8.66E-04
37	GO:0003839: gamma-glutamylcyclotransferase activity	8.66E-04
38	GO:0033201: alpha-1,4-glucan synthase activity	8.66E-04
39	GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity	8.66E-04
40	GO:0016413: O-acetyltransferase activity	9.87E-04
41	GO:0004672: protein kinase activity	1.18E-03
42	GO:0005262: calcium channel activity	1.38E-03
43	GO:0015193: L-proline transmembrane transporter activity	1.40E-03
44	GO:0004075: biotin carboxylase activity	1.40E-03
45	GO:0030267: glyoxylate reductase (NADP) activity	1.40E-03
46	GO:0070402: NADPH binding	1.40E-03
47	GO:0016296: palmitoyl-[acyl-carrier-protein] hydrolase activity	1.40E-03
48	GO:0016295: myristoyl-[acyl-carrier-protein] hydrolase activity	1.40E-03
49	GO:0004373: glycogen (starch) synthase activity	1.40E-03
50	GO:0004445: inositol-polyphosphate 5-phosphatase activity	2.03E-03
51	GO:0016149: translation release factor activity, codon specific	2.03E-03
52	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	2.03E-03
53	GO:0001872: (1->3)-beta-D-glucan binding	2.03E-03
54	GO:0015186: L-glutamine transmembrane transporter activity	2.03E-03
55	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	2.03E-03
56	GO:0003878: ATP citrate synthase activity	2.03E-03
57	GO:0015175: neutral amino acid transmembrane transporter activity	2.03E-03
58	GO:0005528: FK506 binding	2.16E-03
59	GO:0008526: phosphatidylinositol transporter activity	2.73E-03
60	GO:0016836: hydro-lyase activity	2.73E-03
61	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.73E-03
62	GO:0046527: glucosyltransferase activity	2.73E-03
63	GO:0005313: L-glutamate transmembrane transporter activity	2.73E-03
64	GO:0009011: starch synthase activity	2.73E-03
65	GO:0052793: pectin acetylesterase activity	2.73E-03
66	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.37E-03
67	GO:0016773: phosphotransferase activity, alcohol group as acceptor	3.49E-03
68	GO:0017137: Rab GTPase binding	3.49E-03
69	GO:0003989: acetyl-CoA carboxylase activity	3.49E-03
70	GO:0008381: mechanically-gated ion channel activity	3.49E-03
71	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	4.02E-03
72	GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity	4.32E-03
73	GO:0035673: oligopeptide transmembrane transporter activity	4.32E-03
74	GO:0042578: phosphoric ester hydrolase activity	4.32E-03
75	GO:0008200: ion channel inhibitor activity	4.32E-03
76	GO:1990714: hydroxyproline O-galactosyltransferase activity	4.32E-03
77	GO:0019901: protein kinase binding	4.96E-03
78	GO:0005261: cation channel activity	5.20E-03
79	GO:0005242: inward rectifier potassium channel activity	5.20E-03
80	GO:0051920: peroxiredoxin activity	5.20E-03
81	GO:0051753: mannan synthase activity	5.20E-03
82	GO:0015631: tubulin binding	5.20E-03
83	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	5.20E-03
84	GO:0016762: xyloglucan:xyloglucosyl transferase activity	5.31E-03
85	GO:0043295: glutathione binding	6.15E-03
86	GO:0004427: inorganic diphosphatase activity	6.15E-03
87	GO:0016209: antioxidant activity	7.15E-03
88	GO:0015250: water channel activity	7.69E-03
89	GO:0016798: hydrolase activity, acting on glycosyl bonds	9.07E-03
90	GO:0003747: translation release factor activity	9.31E-03
91	GO:0004337: geranyltranstransferase activity	9.31E-03
92	GO:0016829: lyase activity	9.37E-03
93	GO:0005384: manganese ion transmembrane transporter activity	1.05E-02
94	GO:0047617: acyl-CoA hydrolase activity	1.05E-02
95	GO:0005381: iron ion transmembrane transporter activity	1.05E-02
96	GO:0005096: GTPase activator activity	1.06E-02
97	GO:0004871: signal transducer activity	1.06E-02
98	GO:0047372: acylglycerol lipase activity	1.29E-02
99	GO:0004161: dimethylallyltranstransferase activity	1.29E-02
100	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.29E-02
101	GO:0015198: oligopeptide transporter activity	1.43E-02
102	GO:0008378: galactosyltransferase activity	1.43E-02
103	GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	1.43E-02
104	GO:0004022: alcohol dehydrogenase (NAD) activity	1.56E-02
105	GO:0010329: auxin efflux transmembrane transporter activity	1.56E-02
106	GO:0015095: magnesium ion transmembrane transporter activity	1.56E-02
107	GO:0008131: primary amine oxidase activity	1.70E-02
108	GO:0003774: motor activity	1.70E-02
109	GO:0030552: cAMP binding	1.84E-02
110	GO:0030553: cGMP binding	1.84E-02
111	GO:0015293: symporter activity	1.86E-02
112	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.99E-02
113	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.99E-02
114	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.99E-02
115	GO:0003714: transcription corepressor activity	2.14E-02
116	GO:0008324: cation transmembrane transporter activity	2.30E-02
117	GO:0005216: ion channel activity	2.30E-02
118	GO:0033612: receptor serine/threonine kinase binding	2.46E-02
119	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.46E-02
120	GO:0004707: MAP kinase activity	2.46E-02
121	GO:0045330: aspartyl esterase activity	2.47E-02
122	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.63E-02
123	GO:0016760: cellulose synthase (UDP-forming) activity	2.79E-02
124	GO:0030570: pectate lyase activity	2.79E-02
125	GO:0030599: pectinesterase activity	2.99E-02
126	GO:0030551: cyclic nucleotide binding	3.32E-02
127	GO:0003713: transcription coactivator activity	3.50E-02
128	GO:0016853: isomerase activity	3.69E-02
129	GO:0005355: glucose transmembrane transporter activity	3.69E-02
130	GO:0016758: transferase activity, transferring hexosyl groups	3.87E-02
131	GO:0004872: receptor activity	3.87E-02
132	GO:0048038: quinone binding	4.07E-02
133	GO:0051015: actin filament binding	4.46E-02
134	GO:0016787: hydrolase activity	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009930: longitudinal side of cell surface	0.00E+00
3	GO:0070971: endoplasmic reticulum exit site	0.00E+00
4	GO:0005886: plasma membrane	4.82E-12
5	GO:0009505: plant-type cell wall	1.38E-05
6	GO:0009897: external side of plasma membrane	2.48E-05
7	GO:0009534: chloroplast thylakoid	9.29E-05
8	GO:0016021: integral component of membrane	9.33E-05
9	GO:0009507: chloroplast	6.34E-04
10	GO:0009941: chloroplast envelope	7.42E-04
11	GO:0009570: chloroplast stroma	9.56E-04
12	GO:0046658: anchored component of plasma membrane	9.66E-04
13	GO:0016328: lateral plasma membrane	1.40E-03
14	GO:0009543: chloroplast thylakoid lumen	1.70E-03
15	GO:0009346: citrate lyase complex	2.03E-03
16	GO:0032432: actin filament bundle	2.03E-03
17	GO:0031225: anchored component of membrane	2.32E-03
18	GO:0031977: thylakoid lumen	2.49E-03
19	GO:0009535: chloroplast thylakoid membrane	3.51E-03
20	GO:0019898: extrinsic component of membrane	4.96E-03
21	GO:0005618: cell wall	6.28E-03
22	GO:0005887: integral component of plasma membrane	6.31E-03
23	GO:0009501: amyloplast	7.15E-03
24	GO:0031969: chloroplast membrane	7.54E-03
25	GO:0000139: Golgi membrane	7.88E-03
26	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	9.31E-03
27	GO:0009506: plasmodesma	1.01E-02
28	GO:0000151: ubiquitin ligase complex	1.01E-02
29	GO:0016459: myosin complex	1.17E-02
30	GO:0048046: apoplast	1.19E-02
31	GO:0005884: actin filament	1.29E-02
32	GO:0009579: thylakoid	1.37E-02
33	GO:0030659: cytoplasmic vesicle membrane	1.70E-02
34	GO:0030095: chloroplast photosystem II	1.70E-02
35	GO:0043234: protein complex	1.99E-02
36	GO:0009654: photosystem II oxygen evolving complex	2.30E-02
37	GO:0005773: vacuole	2.96E-02
38	GO:0005770: late endosome	3.50E-02
39	GO:0010287: plastoglobule	3.76E-02
40	GO:0005576: extracellular region	4.24E-02
41	GO:0005794: Golgi apparatus	4.76E-02