GO Enrichment Analysis of Co-expressed Genes with
AT4G39980
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000162: tryptophan biosynthetic process | 1.02E-07 |
| 2 | GO:0034976: response to endoplasmic reticulum stress | 1.02E-07 |
| 3 | GO:0006457: protein folding | 1.75E-06 |
| 4 | GO:0034975: protein folding in endoplasmic reticulum | 1.48E-05 |
| 5 | GO:0080183: response to photooxidative stress | 3.88E-05 |
| 6 | GO:0080151: positive regulation of salicylic acid mediated signaling pathway | 3.88E-05 |
| 7 | GO:0009851: auxin biosynthetic process | 5.72E-05 |
| 8 | GO:1902626: assembly of large subunit precursor of preribosome | 6.95E-05 |
| 9 | GO:0042256: mature ribosome assembly | 6.95E-05 |
| 10 | GO:0042742: defense response to bacterium | 9.36E-05 |
| 11 | GO:0045454: cell redox homeostasis | 1.25E-04 |
| 12 | GO:0000460: maturation of 5.8S rRNA | 1.45E-04 |
| 13 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 1.45E-04 |
| 14 | GO:0010600: regulation of auxin biosynthetic process | 1.45E-04 |
| 15 | GO:0000470: maturation of LSU-rRNA | 2.34E-04 |
| 16 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 2.82E-04 |
| 17 | GO:0000054: ribosomal subunit export from nucleus | 2.82E-04 |
| 18 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 3.84E-04 |
| 19 | GO:0010120: camalexin biosynthetic process | 4.37E-04 |
| 20 | GO:0009808: lignin metabolic process | 4.37E-04 |
| 21 | GO:0009821: alkaloid biosynthetic process | 4.93E-04 |
| 22 | GO:0009682: induced systemic resistance | 6.67E-04 |
| 23 | GO:0052544: defense response by callose deposition in cell wall | 6.67E-04 |
| 24 | GO:0010075: regulation of meristem growth | 7.91E-04 |
| 25 | GO:0009617: response to bacterium | 8.26E-04 |
| 26 | GO:0009934: regulation of meristem structural organization | 8.55E-04 |
| 27 | GO:0080147: root hair cell development | 1.05E-03 |
| 28 | GO:0030150: protein import into mitochondrial matrix | 1.05E-03 |
| 29 | GO:0009723: response to ethylene | 1.21E-03 |
| 30 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.26E-03 |
| 31 | GO:0071215: cellular response to abscisic acid stimulus | 1.34E-03 |
| 32 | GO:0009306: protein secretion | 1.41E-03 |
| 33 | GO:0046686: response to cadmium ion | 1.52E-03 |
| 34 | GO:0010197: polar nucleus fusion | 1.65E-03 |
| 35 | GO:0048868: pollen tube development | 1.65E-03 |
| 36 | GO:0009408: response to heat | 1.89E-03 |
| 37 | GO:0009630: gravitropism | 1.98E-03 |
| 38 | GO:0006464: cellular protein modification process | 2.15E-03 |
| 39 | GO:0009567: double fertilization forming a zygote and endosperm | 2.15E-03 |
| 40 | GO:0009615: response to virus | 2.42E-03 |
| 41 | GO:0016126: sterol biosynthetic process | 2.42E-03 |
| 42 | GO:0010311: lateral root formation | 3.00E-03 |
| 43 | GO:0009735: response to cytokinin | 3.03E-03 |
| 44 | GO:0009611: response to wounding | 3.38E-03 |
| 45 | GO:0050832: defense response to fungus | 3.42E-03 |
| 46 | GO:0051707: response to other organism | 4.04E-03 |
| 47 | GO:0006486: protein glycosylation | 4.95E-03 |
| 48 | GO:0009620: response to fungus | 5.93E-03 |
| 49 | GO:0009553: embryo sac development | 6.18E-03 |
| 50 | GO:0009058: biosynthetic process | 7.65E-03 |
| 51 | GO:0015031: protein transport | 8.47E-03 |
| 52 | GO:0006413: translational initiation | 8.79E-03 |
| 53 | GO:0009860: pollen tube growth | 1.32E-02 |
| 54 | GO:0016192: vesicle-mediated transport | 1.51E-02 |
| 55 | GO:0009793: embryo development ending in seed dormancy | 1.55E-02 |
| 56 | GO:0006886: intracellular protein transport | 1.70E-02 |
| 57 | GO:0055114: oxidation-reduction process | 1.90E-02 |
| 58 | GO:0009751: response to salicylic acid | 1.91E-02 |
| 59 | GO:0009753: response to jasmonic acid | 2.02E-02 |
| 60 | GO:0055085: transmembrane transport | 3.44E-02 |
| 61 | GO:0009414: response to water deprivation | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 2 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 3 | GO:0003756: protein disulfide isomerase activity | 2.92E-07 |
| 4 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 1.48E-05 |
| 5 | GO:0033984: indole-3-glycerol-phosphate lyase activity | 1.48E-05 |
| 6 | GO:0004049: anthranilate synthase activity | 6.95E-05 |
| 7 | GO:0000030: mannosyltransferase activity | 6.95E-05 |
| 8 | GO:0035529: NADH pyrophosphatase activity | 1.05E-04 |
| 9 | GO:0043023: ribosomal large subunit binding | 1.05E-04 |
| 10 | GO:0004834: tryptophan synthase activity | 1.45E-04 |
| 11 | GO:0047631: ADP-ribose diphosphatase activity | 1.88E-04 |
| 12 | GO:0000210: NAD+ diphosphatase activity | 2.34E-04 |
| 13 | GO:0004656: procollagen-proline 4-dioxygenase activity | 2.82E-04 |
| 14 | GO:0008320: protein transmembrane transporter activity | 3.32E-04 |
| 15 | GO:0043022: ribosome binding | 3.84E-04 |
| 16 | GO:0015035: protein disulfide oxidoreductase activity | 4.24E-04 |
| 17 | GO:0016844: strictosidine synthase activity | 5.49E-04 |
| 18 | GO:0008559: xenobiotic-transporting ATPase activity | 6.67E-04 |
| 19 | GO:0015266: protein channel activity | 7.91E-04 |
| 20 | GO:0031418: L-ascorbic acid binding | 1.05E-03 |
| 21 | GO:0016853: isomerase activity | 1.73E-03 |
| 22 | GO:0010181: FMN binding | 1.73E-03 |
| 23 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 2.07E-03 |
| 24 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.90E-03 |
| 25 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.40E-03 |
| 26 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.26E-03 |
| 27 | GO:0051287: NAD binding | 4.60E-03 |
| 28 | GO:0051082: unfolded protein binding | 6.31E-03 |
| 29 | GO:0005506: iron ion binding | 6.56E-03 |
| 30 | GO:0005524: ATP binding | 9.57E-03 |
| 31 | GO:0003743: translation initiation factor activity | 1.03E-02 |
| 32 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.09E-02 |
| 33 | GO:0016787: hydrolase activity | 1.43E-02 |
| 34 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.75E-02 |
| 35 | GO:0009055: electron carrier activity | 2.02E-02 |
| 36 | GO:0046872: metal ion binding | 2.48E-02 |
| 37 | GO:0016887: ATPase activity | 2.63E-02 |
| 38 | GO:0005507: copper ion binding | 3.73E-02 |
| 39 | GO:0019825: oxygen binding | 3.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005783: endoplasmic reticulum | 2.56E-11 |
| 2 | GO:0005788: endoplasmic reticulum lumen | 1.04E-08 |
| 3 | GO:0005774: vacuolar membrane | 8.18E-06 |
| 4 | GO:0005901: caveola | 3.88E-05 |
| 5 | GO:0005950: anthranilate synthase complex | 3.88E-05 |
| 6 | GO:0030134: ER to Golgi transport vesicle | 3.88E-05 |
| 7 | GO:0016592: mediator complex | 6.68E-05 |
| 8 | GO:0005801: cis-Golgi network | 2.82E-04 |
| 9 | GO:0030687: preribosome, large subunit precursor | 3.32E-04 |
| 10 | GO:0031305: integral component of mitochondrial inner membrane | 3.84E-04 |
| 11 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.41E-03 |
| 12 | GO:0005789: endoplasmic reticulum membrane | 1.48E-03 |
| 13 | GO:0000325: plant-type vacuole | 3.20E-03 |
| 14 | GO:0009507: chloroplast | 3.42E-03 |
| 15 | GO:0016020: membrane | 3.96E-03 |
| 16 | GO:0005773: vacuole | 7.13E-03 |
| 17 | GO:0009505: plant-type cell wall | 8.35E-03 |
| 18 | GO:0009570: chloroplast stroma | 9.33E-03 |
| 19 | GO:0005829: cytosol | 1.61E-02 |
| 20 | GO:0005743: mitochondrial inner membrane | 1.83E-02 |
| 21 | GO:0005576: extracellular region | 2.86E-02 |
| 22 | GO:0005777: peroxisome | 3.20E-02 |
| 23 | GO:0005794: Golgi apparatus | 3.32E-02 |