GO Enrichment Analysis of Co-expressed Genes with
AT4G39520
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006182: cGMP biosynthetic process | 0.00E+00 |
| 2 | GO:0017126: nucleologenesis | 0.00E+00 |
| 3 | GO:0009617: response to bacterium | 2.92E-08 |
| 4 | GO:0010421: hydrogen peroxide-mediated programmed cell death | 4.74E-05 |
| 5 | GO:0042964: thioredoxin reduction | 4.74E-05 |
| 6 | GO:0050691: regulation of defense response to virus by host | 4.74E-05 |
| 7 | GO:0045905: positive regulation of translational termination | 1.17E-04 |
| 8 | GO:0045901: positive regulation of translational elongation | 1.17E-04 |
| 9 | GO:0006452: translational frameshifting | 1.17E-04 |
| 10 | GO:0009866: induced systemic resistance, ethylene mediated signaling pathway | 1.17E-04 |
| 11 | GO:0044419: interspecies interaction between organisms | 1.17E-04 |
| 12 | GO:0042742: defense response to bacterium | 1.71E-04 |
| 13 | GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway | 2.00E-04 |
| 14 | GO:0006413: translational initiation | 2.76E-04 |
| 15 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 3.94E-04 |
| 16 | GO:0046345: abscisic acid catabolic process | 3.94E-04 |
| 17 | GO:0009627: systemic acquired resistance | 4.81E-04 |
| 18 | GO:0010225: response to UV-C | 5.00E-04 |
| 19 | GO:0034052: positive regulation of plant-type hypersensitive response | 5.00E-04 |
| 20 | GO:0000304: response to singlet oxygen | 5.00E-04 |
| 21 | GO:0009697: salicylic acid biosynthetic process | 5.00E-04 |
| 22 | GO:0009817: defense response to fungus, incompatible interaction | 5.59E-04 |
| 23 | GO:0010405: arabinogalactan protein metabolic process | 6.13E-04 |
| 24 | GO:0010256: endomembrane system organization | 6.13E-04 |
| 25 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 6.13E-04 |
| 26 | GO:0042372: phylloquinone biosynthetic process | 7.31E-04 |
| 27 | GO:0006458: 'de novo' protein folding | 7.31E-04 |
| 28 | GO:1900056: negative regulation of leaf senescence | 8.54E-04 |
| 29 | GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c | 8.54E-04 |
| 30 | GO:0030091: protein repair | 9.81E-04 |
| 31 | GO:0009751: response to salicylic acid | 1.10E-03 |
| 32 | GO:0019430: removal of superoxide radicals | 1.11E-03 |
| 33 | GO:0010120: camalexin biosynthetic process | 1.11E-03 |
| 34 | GO:0010112: regulation of systemic acquired resistance | 1.25E-03 |
| 35 | GO:0009060: aerobic respiration | 1.25E-03 |
| 36 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 1.40E-03 |
| 37 | GO:0009620: response to fungus | 1.52E-03 |
| 38 | GO:0016485: protein processing | 1.70E-03 |
| 39 | GO:0009682: induced systemic resistance | 1.70E-03 |
| 40 | GO:0009073: aromatic amino acid family biosynthetic process | 1.70E-03 |
| 41 | GO:0006790: sulfur compound metabolic process | 1.86E-03 |
| 42 | GO:0012501: programmed cell death | 1.86E-03 |
| 43 | GO:0002213: defense response to insect | 1.86E-03 |
| 44 | GO:0015706: nitrate transport | 1.86E-03 |
| 45 | GO:0046686: response to cadmium ion | 2.02E-03 |
| 46 | GO:0002237: response to molecule of bacterial origin | 2.20E-03 |
| 47 | GO:0046854: phosphatidylinositol phosphorylation | 2.38E-03 |
| 48 | GO:0010167: response to nitrate | 2.38E-03 |
| 49 | GO:0046688: response to copper ion | 2.38E-03 |
| 50 | GO:0006825: copper ion transport | 2.93E-03 |
| 51 | GO:0051302: regulation of cell division | 2.93E-03 |
| 52 | GO:0061077: chaperone-mediated protein folding | 3.12E-03 |
| 53 | GO:0031348: negative regulation of defense response | 3.32E-03 |
| 54 | GO:0010089: xylem development | 3.73E-03 |
| 55 | GO:0008033: tRNA processing | 4.15E-03 |
| 56 | GO:0010118: stomatal movement | 4.15E-03 |
| 57 | GO:0080156: mitochondrial mRNA modification | 5.04E-03 |
| 58 | GO:0010193: response to ozone | 5.04E-03 |
| 59 | GO:0000302: response to reactive oxygen species | 5.04E-03 |
| 60 | GO:0050832: defense response to fungus | 5.37E-03 |
| 61 | GO:0030163: protein catabolic process | 5.52E-03 |
| 62 | GO:0006508: proteolysis | 5.65E-03 |
| 63 | GO:0009615: response to virus | 6.50E-03 |
| 64 | GO:0016126: sterol biosynthetic process | 6.50E-03 |
| 65 | GO:0042128: nitrate assimilation | 7.01E-03 |
| 66 | GO:0016311: dephosphorylation | 7.54E-03 |
| 67 | GO:0016049: cell growth | 7.54E-03 |
| 68 | GO:0009407: toxin catabolic process | 8.37E-03 |
| 69 | GO:0007568: aging | 8.65E-03 |
| 70 | GO:0006099: tricarboxylic acid cycle | 9.51E-03 |
| 71 | GO:0055114: oxidation-reduction process | 9.69E-03 |
| 72 | GO:0042542: response to hydrogen peroxide | 1.07E-02 |
| 73 | GO:0009636: response to toxic substance | 1.20E-02 |
| 74 | GO:0031347: regulation of defense response | 1.26E-02 |
| 75 | GO:0009846: pollen germination | 1.29E-02 |
| 76 | GO:0006486: protein glycosylation | 1.36E-02 |
| 77 | GO:0006417: regulation of translation | 1.46E-02 |
| 78 | GO:0048316: seed development | 1.57E-02 |
| 79 | GO:0009626: plant-type hypersensitive response | 1.60E-02 |
| 80 | GO:0009790: embryo development | 2.29E-02 |
| 81 | GO:0040008: regulation of growth | 2.49E-02 |
| 82 | GO:0009651: response to salt stress | 2.59E-02 |
| 83 | GO:0007166: cell surface receptor signaling pathway | 2.83E-02 |
| 84 | GO:0006979: response to oxidative stress | 2.91E-02 |
| 85 | GO:0042254: ribosome biogenesis | 3.56E-02 |
| 86 | GO:0006970: response to osmotic stress | 3.70E-02 |
| 87 | GO:0010200: response to chitin | 4.19E-02 |
| 88 | GO:0045454: cell redox homeostasis | 4.65E-02 |
| 89 | GO:0006869: lipid transport | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0047720: indoleacetaldoxime dehydratase activity | 0.00E+00 |
| 2 | GO:0004631: phosphomevalonate kinase activity | 0.00E+00 |
| 3 | GO:0016312: inositol bisphosphate phosphatase activity | 0.00E+00 |
| 4 | GO:0048037: cofactor binding | 4.74E-05 |
| 5 | GO:0008909: isochorismate synthase activity | 4.74E-05 |
| 6 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.17E-04 |
| 7 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.17E-04 |
| 8 | GO:0003849: 3-deoxy-7-phosphoheptulonate synthase activity | 1.17E-04 |
| 9 | GO:0004383: guanylate cyclase activity | 2.00E-04 |
| 10 | GO:0016531: copper chaperone activity | 2.00E-04 |
| 11 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 2.00E-04 |
| 12 | GO:0003743: translation initiation factor activity | 3.71E-04 |
| 13 | GO:0010294: abscisic acid glucosyltransferase activity | 5.00E-04 |
| 14 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 6.13E-04 |
| 15 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 6.43E-04 |
| 16 | GO:0008113: peptide-methionine (S)-S-oxide reductase activity | 7.31E-04 |
| 17 | GO:0033743: peptide-methionine (R)-S-oxide reductase activity | 7.31E-04 |
| 18 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 7.31E-04 |
| 19 | GO:0043022: ribosome binding | 9.81E-04 |
| 20 | GO:0015112: nitrate transmembrane transporter activity | 1.40E-03 |
| 21 | GO:0045309: protein phosphorylated amino acid binding | 1.40E-03 |
| 22 | GO:0044183: protein binding involved in protein folding | 1.70E-03 |
| 23 | GO:0019904: protein domain specific binding | 1.70E-03 |
| 24 | GO:0008378: galactosyltransferase activity | 1.86E-03 |
| 25 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.03E-03 |
| 26 | GO:0004791: thioredoxin-disulfide reductase activity | 4.59E-03 |
| 27 | GO:0010181: FMN binding | 4.59E-03 |
| 28 | GO:0050660: flavin adenine dinucleotide binding | 5.06E-03 |
| 29 | GO:0004197: cysteine-type endopeptidase activity | 5.28E-03 |
| 30 | GO:0052689: carboxylic ester hydrolase activity | 5.99E-03 |
| 31 | GO:0008237: metallopeptidase activity | 6.00E-03 |
| 32 | GO:0030247: polysaccharide binding | 7.28E-03 |
| 33 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 7.54E-03 |
| 34 | GO:0016491: oxidoreductase activity | 7.94E-03 |
| 35 | GO:0004222: metalloendopeptidase activity | 8.37E-03 |
| 36 | GO:0009055: electron carrier activity | 8.58E-03 |
| 37 | GO:0003746: translation elongation factor activity | 9.22E-03 |
| 38 | GO:0003697: single-stranded DNA binding | 9.22E-03 |
| 39 | GO:0003729: mRNA binding | 9.27E-03 |
| 40 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.01E-02 |
| 41 | GO:0004364: glutathione transferase activity | 1.07E-02 |
| 42 | GO:0043621: protein self-association | 1.16E-02 |
| 43 | GO:0016298: lipase activity | 1.39E-02 |
| 44 | GO:0000166: nucleotide binding | 1.42E-02 |
| 45 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 1.64E-02 |
| 46 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 1.64E-02 |
| 47 | GO:0051082: unfolded protein binding | 1.75E-02 |
| 48 | GO:0015035: protein disulfide oxidoreductase activity | 1.78E-02 |
| 49 | GO:0016758: transferase activity, transferring hexosyl groups | 2.01E-02 |
| 50 | GO:0005507: copper ion binding | 2.03E-02 |
| 51 | GO:0016829: lyase activity | 2.16E-02 |
| 52 | GO:0004252: serine-type endopeptidase activity | 2.20E-02 |
| 53 | GO:0008194: UDP-glycosyltransferase activity | 2.79E-02 |
| 54 | GO:0042802: identical protein binding | 3.05E-02 |
| 55 | GO:0005524: ATP binding | 3.40E-02 |
| 56 | GO:0008168: methyltransferase activity | 3.42E-02 |
| 57 | GO:0046872: metal ion binding | 3.65E-02 |
| 58 | GO:0004674: protein serine/threonine kinase activity | 4.17E-02 |
| 59 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 2 | GO:0005758: mitochondrial intermembrane space | 1.14E-04 |
| 3 | GO:0005829: cytosol | 2.92E-04 |
| 4 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.70E-03 |
| 5 | GO:0008541: proteasome regulatory particle, lid subcomplex | 1.70E-03 |
| 6 | GO:0005750: mitochondrial respiratory chain complex III | 2.20E-03 |
| 7 | GO:0005759: mitochondrial matrix | 2.60E-03 |
| 8 | GO:0005741: mitochondrial outer membrane | 3.12E-03 |
| 9 | GO:0009536: plastid | 7.25E-03 |
| 10 | GO:0005618: cell wall | 8.32E-03 |
| 11 | GO:0005737: cytoplasm | 9.27E-03 |
| 12 | GO:0000502: proteasome complex | 1.36E-02 |
| 13 | GO:0005635: nuclear envelope | 1.43E-02 |
| 14 | GO:0005777: peroxisome | 1.63E-02 |
| 15 | GO:0031225: anchored component of membrane | 2.22E-02 |
| 16 | GO:0009705: plant-type vacuole membrane | 2.57E-02 |
| 17 | GO:0005615: extracellular space | 2.79E-02 |
| 18 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.75E-02 |
| 19 | GO:0022625: cytosolic large ribosomal subunit | 4.24E-02 |