GO Enrichment Analysis of Co-expressed Genes with
AT4G39390
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080053: response to phenylalanine | 0.00E+00 |
| 2 | GO:0002376: immune system process | 0.00E+00 |
| 3 | GO:0006042: glucosamine biosynthetic process | 0.00E+00 |
| 4 | GO:1901137: carbohydrate derivative biosynthetic process | 0.00E+00 |
| 5 | GO:1902001: fatty acid transmembrane transport | 0.00E+00 |
| 6 | GO:0043201: response to leucine | 0.00E+00 |
| 7 | GO:0080052: response to histidine | 0.00E+00 |
| 8 | GO:0019276: UDP-N-acetylgalactosamine metabolic process | 3.50E-05 |
| 9 | GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine | 3.50E-05 |
| 10 | GO:0006047: UDP-N-acetylglucosamine metabolic process | 3.50E-05 |
| 11 | GO:0042939: tripeptide transport | 8.78E-05 |
| 12 | GO:0071668: plant-type cell wall assembly | 8.78E-05 |
| 13 | GO:0055088: lipid homeostasis | 8.78E-05 |
| 14 | GO:0015908: fatty acid transport | 8.78E-05 |
| 15 | GO:0006048: UDP-N-acetylglucosamine biosynthetic process | 1.52E-04 |
| 16 | GO:0006954: inflammatory response | 1.52E-04 |
| 17 | GO:0006011: UDP-glucose metabolic process | 1.52E-04 |
| 18 | GO:0033014: tetrapyrrole biosynthetic process | 2.25E-04 |
| 19 | GO:0071219: cellular response to molecule of bacterial origin | 3.05E-04 |
| 20 | GO:0080142: regulation of salicylic acid biosynthetic process | 3.05E-04 |
| 21 | GO:0042938: dipeptide transport | 3.05E-04 |
| 22 | GO:0080037: negative regulation of cytokinin-activated signaling pathway | 3.05E-04 |
| 23 | GO:0010483: pollen tube reception | 3.05E-04 |
| 24 | GO:0010387: COP9 signalosome assembly | 3.05E-04 |
| 25 | GO:0006511: ubiquitin-dependent protein catabolic process | 3.09E-04 |
| 26 | GO:0009697: salicylic acid biosynthetic process | 3.89E-04 |
| 27 | GO:2000762: regulation of phenylpropanoid metabolic process | 3.89E-04 |
| 28 | GO:0018279: protein N-linked glycosylation via asparagine | 3.89E-04 |
| 29 | GO:0046283: anthocyanin-containing compound metabolic process | 3.89E-04 |
| 30 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 4.78E-04 |
| 31 | GO:0042742: defense response to bacterium | 5.75E-04 |
| 32 | GO:0000338: protein deneddylation | 6.66E-04 |
| 33 | GO:0009751: response to salicylic acid | 6.81E-04 |
| 34 | GO:0006102: isocitrate metabolic process | 7.68E-04 |
| 35 | GO:0030162: regulation of proteolysis | 7.68E-04 |
| 36 | GO:0010204: defense response signaling pathway, resistance gene-independent | 8.71E-04 |
| 37 | GO:0030968: endoplasmic reticulum unfolded protein response | 8.71E-04 |
| 38 | GO:0010208: pollen wall assembly | 8.71E-04 |
| 39 | GO:0006783: heme biosynthetic process | 9.78E-04 |
| 40 | GO:0010112: regulation of systemic acquired resistance | 9.78E-04 |
| 41 | GO:0046685: response to arsenic-containing substance | 9.78E-04 |
| 42 | GO:0009626: plant-type hypersensitive response | 1.02E-03 |
| 43 | GO:1900426: positive regulation of defense response to bacterium | 1.09E-03 |
| 44 | GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway | 1.09E-03 |
| 45 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.32E-03 |
| 46 | GO:0016925: protein sumoylation | 1.44E-03 |
| 47 | GO:0010150: leaf senescence | 1.95E-03 |
| 48 | GO:0000162: tryptophan biosynthetic process | 1.97E-03 |
| 49 | GO:0006487: protein N-linked glycosylation | 2.12E-03 |
| 50 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.56E-03 |
| 51 | GO:0031348: negative regulation of defense response | 2.56E-03 |
| 52 | GO:0071456: cellular response to hypoxia | 2.56E-03 |
| 53 | GO:0009306: protein secretion | 2.87E-03 |
| 54 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.03E-03 |
| 55 | GO:0002229: defense response to oomycetes | 3.88E-03 |
| 56 | GO:0030163: protein catabolic process | 4.24E-03 |
| 57 | GO:0015031: protein transport | 4.63E-03 |
| 58 | GO:0006950: response to stress | 5.58E-03 |
| 59 | GO:0015995: chlorophyll biosynthetic process | 5.58E-03 |
| 60 | GO:0009753: response to jasmonic acid | 5.83E-03 |
| 61 | GO:0010043: response to zinc ion | 6.61E-03 |
| 62 | GO:0045087: innate immune response | 7.05E-03 |
| 63 | GO:0016051: carbohydrate biosynthetic process | 7.05E-03 |
| 64 | GO:0006099: tricarboxylic acid cycle | 7.27E-03 |
| 65 | GO:0051707: response to other organism | 8.41E-03 |
| 66 | GO:0009640: photomorphogenesis | 8.41E-03 |
| 67 | GO:0006855: drug transmembrane transport | 9.36E-03 |
| 68 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 9.61E-03 |
| 69 | GO:0009555: pollen development | 9.64E-03 |
| 70 | GO:0009846: pollen germination | 9.86E-03 |
| 71 | GO:0042538: hyperosmotic salinity response | 9.86E-03 |
| 72 | GO:0006486: protein glycosylation | 1.04E-02 |
| 73 | GO:0009585: red, far-red light phototransduction | 1.04E-02 |
| 74 | GO:0010224: response to UV-B | 1.06E-02 |
| 75 | GO:0006857: oligopeptide transport | 1.09E-02 |
| 76 | GO:0009553: embryo sac development | 1.30E-02 |
| 77 | GO:0009624: response to nematode | 1.33E-02 |
| 78 | GO:0018105: peptidyl-serine phosphorylation | 1.36E-02 |
| 79 | GO:0009742: brassinosteroid mediated signaling pathway | 1.38E-02 |
| 80 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.12E-02 |
| 81 | GO:0009617: response to bacterium | 2.22E-02 |
| 82 | GO:0046686: response to cadmium ion | 3.05E-02 |
| 83 | GO:0080167: response to karrikin | 3.11E-02 |
| 84 | GO:0010200: response to chitin | 3.19E-02 |
| 85 | GO:0016192: vesicle-mediated transport | 3.23E-02 |
| 86 | GO:0046777: protein autophosphorylation | 3.27E-02 |
| 87 | GO:0045454: cell redox homeostasis | 3.54E-02 |
| 88 | GO:0006886: intracellular protein transport | 3.62E-02 |
| 89 | GO:0032259: methylation | 3.98E-02 |
| 90 | GO:0009737: response to abscisic acid | 4.16E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity | 0.00E+00 |
| 2 | GO:0004164: diphthine synthase activity | 0.00E+00 |
| 3 | GO:0003980: UDP-glucose:glycoprotein glucosyltransferase activity | 0.00E+00 |
| 4 | GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity | 3.50E-05 |
| 5 | GO:0015157: oligosaccharide transmembrane transporter activity | 3.50E-05 |
| 6 | GO:0015245: fatty acid transporter activity | 3.50E-05 |
| 7 | GO:0010285: L,L-diaminopimelate aminotransferase activity | 3.50E-05 |
| 8 | GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity | 3.50E-05 |
| 9 | GO:0097367: carbohydrate derivative binding | 3.50E-05 |
| 10 | GO:0004048: anthranilate phosphoribosyltransferase activity | 3.50E-05 |
| 11 | GO:0004325: ferrochelatase activity | 3.50E-05 |
| 12 | GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity | 3.50E-05 |
| 13 | GO:0042937: tripeptide transporter activity | 8.78E-05 |
| 14 | GO:0004298: threonine-type endopeptidase activity | 9.30E-05 |
| 15 | GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity | 1.52E-04 |
| 16 | GO:0004148: dihydrolipoyl dehydrogenase activity | 1.52E-04 |
| 17 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 2.25E-04 |
| 18 | GO:0008483: transaminase activity | 2.61E-04 |
| 19 | GO:0042936: dipeptide transporter activity | 3.05E-04 |
| 20 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 3.89E-04 |
| 21 | GO:0008233: peptidase activity | 4.17E-04 |
| 22 | GO:0050897: cobalt ion binding | 4.43E-04 |
| 23 | GO:0036402: proteasome-activating ATPase activity | 4.78E-04 |
| 24 | GO:0030976: thiamine pyrophosphate binding | 4.78E-04 |
| 25 | GO:0008320: protein transmembrane transporter activity | 6.66E-04 |
| 26 | GO:0045309: protein phosphorylated amino acid binding | 1.09E-03 |
| 27 | GO:0019904: protein domain specific binding | 1.32E-03 |
| 28 | GO:0017025: TBP-class protein binding | 1.84E-03 |
| 29 | GO:0004190: aspartic-type endopeptidase activity | 1.84E-03 |
| 30 | GO:0016779: nucleotidyltransferase activity | 2.56E-03 |
| 31 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 5.38E-03 |
| 32 | GO:0004683: calmodulin-dependent protein kinase activity | 5.58E-03 |
| 33 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 5.99E-03 |
| 34 | GO:0015238: drug transmembrane transporter activity | 6.19E-03 |
| 35 | GO:0004222: metalloendopeptidase activity | 6.40E-03 |
| 36 | GO:0051287: NAD binding | 9.61E-03 |
| 37 | GO:0031625: ubiquitin protein ligase binding | 1.11E-02 |
| 38 | GO:0004650: polygalacturonase activity | 1.25E-02 |
| 39 | GO:0016746: transferase activity, transferring acyl groups | 1.36E-02 |
| 40 | GO:0005516: calmodulin binding | 1.45E-02 |
| 41 | GO:0016758: transferase activity, transferring hexosyl groups | 1.53E-02 |
| 42 | GO:0016829: lyase activity | 1.65E-02 |
| 43 | GO:0030170: pyridoxal phosphate binding | 1.68E-02 |
| 44 | GO:0008565: protein transporter activity | 1.77E-02 |
| 45 | GO:0005509: calcium ion binding | 1.81E-02 |
| 46 | GO:0015297: antiporter activity | 1.89E-02 |
| 47 | GO:0005215: transporter activity | 2.17E-02 |
| 48 | GO:0008168: methyltransferase activity | 2.60E-02 |
| 49 | GO:0000287: magnesium ion binding | 2.64E-02 |
| 50 | GO:0050660: flavin adenine dinucleotide binding | 2.96E-02 |
| 51 | GO:0052689: carboxylic ester hydrolase activity | 3.34E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019773: proteasome core complex, alpha-subunit complex | 1.40E-05 |
| 2 | GO:0000502: proteasome complex | 4.77E-05 |
| 3 | GO:0030134: ER to Golgi transport vesicle | 8.78E-05 |
| 4 | GO:0005839: proteasome core complex | 9.30E-05 |
| 5 | GO:0030660: Golgi-associated vesicle membrane | 3.05E-04 |
| 6 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 3.05E-04 |
| 7 | GO:0008250: oligosaccharyltransferase complex | 3.89E-04 |
| 8 | GO:0031597: cytosolic proteasome complex | 5.70E-04 |
| 9 | GO:0031595: nuclear proteasome complex | 6.66E-04 |
| 10 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 7.68E-04 |
| 11 | GO:0009536: plastid | 7.83E-04 |
| 12 | GO:0008180: COP9 signalosome | 9.78E-04 |
| 13 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.09E-03 |
| 14 | GO:0005765: lysosomal membrane | 1.32E-03 |
| 15 | GO:0005783: endoplasmic reticulum | 2.75E-03 |
| 16 | GO:0031969: chloroplast membrane | 3.70E-03 |
| 17 | GO:0032580: Golgi cisterna membrane | 4.42E-03 |
| 18 | GO:0005788: endoplasmic reticulum lumen | 5.18E-03 |
| 19 | GO:0005789: endoplasmic reticulum membrane | 5.84E-03 |
| 20 | GO:0009941: chloroplast envelope | 5.93E-03 |
| 21 | GO:0019005: SCF ubiquitin ligase complex | 5.99E-03 |
| 22 | GO:0005829: cytosol | 6.05E-03 |
| 23 | GO:0009507: chloroplast | 8.49E-03 |
| 24 | GO:0005747: mitochondrial respiratory chain complex I | 1.19E-02 |
| 25 | GO:0009706: chloroplast inner membrane | 1.33E-02 |
| 26 | GO:0005759: mitochondrial matrix | 1.83E-02 |
| 27 | GO:0016021: integral component of membrane | 2.54E-02 |