GO Enrichment Analysis of Co-expressed Genes with
AT4G39210
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031990: mRNA export from nucleus in response to heat stress | 0.00E+00 |
| 2 | GO:1900424: regulation of defense response to bacterium | 5.43E-06 |
| 3 | GO:0080093: regulation of photorespiration | 5.43E-06 |
| 4 | GO:0031998: regulation of fatty acid beta-oxidation | 5.43E-06 |
| 5 | GO:0034402: recruitment of 3'-end processing factors to RNA polymerase II holoenzyme complex | 5.43E-06 |
| 6 | GO:0007051: spindle organization | 1.49E-05 |
| 7 | GO:0045948: positive regulation of translational initiation | 1.49E-05 |
| 8 | GO:0000288: nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay | 2.75E-05 |
| 9 | GO:0006564: L-serine biosynthetic process | 7.90E-05 |
| 10 | GO:0006097: glyoxylate cycle | 7.90E-05 |
| 11 | GO:0006405: RNA export from nucleus | 7.90E-05 |
| 12 | GO:0006121: mitochondrial electron transport, succinate to ubiquinone | 9.99E-05 |
| 13 | GO:0000060: protein import into nucleus, translocation | 9.99E-05 |
| 14 | GO:0009082: branched-chain amino acid biosynthetic process | 1.22E-04 |
| 15 | GO:0009099: valine biosynthetic process | 1.22E-04 |
| 16 | GO:0071669: plant-type cell wall organization or biogenesis | 1.46E-04 |
| 17 | GO:0000082: G1/S transition of mitotic cell cycle | 1.46E-04 |
| 18 | GO:0006367: transcription initiation from RNA polymerase II promoter | 1.96E-04 |
| 19 | GO:0009097: isoleucine biosynthetic process | 1.96E-04 |
| 20 | GO:0046916: cellular transition metal ion homeostasis | 2.22E-04 |
| 21 | GO:0009098: leucine biosynthetic process | 2.49E-04 |
| 22 | GO:0009807: lignan biosynthetic process | 3.06E-04 |
| 23 | GO:0006108: malate metabolic process | 3.65E-04 |
| 24 | GO:0006825: copper ion transport | 5.23E-04 |
| 25 | GO:0006366: transcription from RNA polymerase II promoter | 5.55E-04 |
| 26 | GO:0051028: mRNA transport | 6.93E-04 |
| 27 | GO:0034220: ion transmembrane transport | 7.29E-04 |
| 28 | GO:0006099: tricarboxylic acid cycle | 1.58E-03 |
| 29 | GO:0030001: metal ion transport | 1.67E-03 |
| 30 | GO:0032259: methylation | 8.08E-03 |
| 31 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.55E-02 |
| 32 | GO:0042742: defense response to bacterium | 2.06E-02 |
| 33 | GO:0006979: response to oxidative stress | 2.07E-02 |
| 34 | GO:0015031: protein transport | 2.44E-02 |
| 35 | GO:0006810: transport | 2.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0018708: thiol S-methyltransferase activity | 1.49E-05 |
| 2 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.49E-05 |
| 3 | GO:0052656: L-isoleucine transaminase activity | 4.27E-05 |
| 4 | GO:0052654: L-leucine transaminase activity | 4.27E-05 |
| 5 | GO:0052655: L-valine transaminase activity | 4.27E-05 |
| 6 | GO:0004084: branched-chain-amino-acid transaminase activity | 5.99E-05 |
| 7 | GO:0000104: succinate dehydrogenase activity | 7.90E-05 |
| 8 | GO:0016615: malate dehydrogenase activity | 9.99E-05 |
| 9 | GO:0031369: translation initiation factor binding | 9.99E-05 |
| 10 | GO:0030060: L-malate dehydrogenase activity | 1.22E-04 |
| 11 | GO:0046914: transition metal ion binding | 1.96E-04 |
| 12 | GO:0004725: protein tyrosine phosphatase activity | 4.58E-04 |
| 13 | GO:0003727: single-stranded RNA binding | 6.58E-04 |
| 14 | GO:0008536: Ran GTPase binding | 7.65E-04 |
| 15 | GO:0016597: amino acid binding | 1.07E-03 |
| 16 | GO:0015250: water channel activity | 1.11E-03 |
| 17 | GO:0004721: phosphoprotein phosphatase activity | 1.23E-03 |
| 18 | GO:0005096: GTPase activator activity | 1.36E-03 |
| 19 | GO:0003697: single-stranded DNA binding | 1.53E-03 |
| 20 | GO:0051287: NAD binding | 2.06E-03 |
| 21 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.21E-03 |
| 22 | GO:0008565: protein transporter activity | 3.69E-03 |
| 23 | GO:0008168: methyltransferase activity | 5.34E-03 |
| 24 | GO:0000166: nucleotide binding | 1.25E-02 |
| 25 | GO:0005516: calmodulin binding | 1.67E-02 |
| 26 | GO:0003824: catalytic activity | 2.20E-02 |
| 27 | GO:0005215: transporter activity | 2.21E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005749: mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 1.70E-04 |
| 2 | GO:0005665: DNA-directed RNA polymerase II, core complex | 3.35E-04 |
| 3 | GO:0000785: chromatin | 9.12E-04 |
| 4 | GO:0005778: peroxisomal membrane | 1.03E-03 |
| 5 | GO:0000932: P-body | 1.11E-03 |
| 6 | GO:0005643: nuclear pore | 1.31E-03 |
| 7 | GO:0031969: chloroplast membrane | 6.35E-03 |
| 8 | GO:0016020: membrane | 6.45E-03 |
| 9 | GO:0009941: chloroplast envelope | 9.33E-03 |
| 10 | GO:0005887: integral component of plasma membrane | 1.03E-02 |
| 11 | GO:0005737: cytoplasm | 1.25E-02 |
| 12 | GO:0005777: peroxisome | 1.38E-02 |
| 13 | GO:0005783: endoplasmic reticulum | 1.39E-02 |
| 14 | GO:0009536: plastid | 2.38E-02 |
| 15 | GO:0005789: endoplasmic reticulum membrane | 2.79E-02 |
| 16 | GO:0009507: chloroplast | 3.56E-02 |