GO Enrichment Analysis of Co-expressed Genes with
AT4G39140
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016236: macroautophagy | 0.00E+00 |
| 2 | GO:0010265: SCF complex assembly | 1.87E-05 |
| 3 | GO:0010201: response to continuous far red light stimulus by the high-irradiance response system | 1.87E-05 |
| 4 | GO:0030242: pexophagy | 1.87E-05 |
| 5 | GO:0001676: long-chain fatty acid metabolic process | 1.30E-04 |
| 6 | GO:2000114: regulation of establishment of cell polarity | 1.30E-04 |
| 7 | GO:1902476: chloride transmembrane transport | 1.30E-04 |
| 8 | GO:0072583: clathrin-dependent endocytosis | 1.30E-04 |
| 9 | GO:0045324: late endosome to vacuole transport | 1.78E-04 |
| 10 | GO:0006631: fatty acid metabolic process | 2.64E-04 |
| 11 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 3.48E-04 |
| 12 | GO:0006821: chloride transport | 4.02E-04 |
| 13 | GO:0010038: response to metal ion | 4.02E-04 |
| 14 | GO:0009610: response to symbiotic fungus | 4.02E-04 |
| 15 | GO:0043068: positive regulation of programmed cell death | 4.64E-04 |
| 16 | GO:0006102: isocitrate metabolic process | 4.64E-04 |
| 17 | GO:0048766: root hair initiation | 4.64E-04 |
| 18 | GO:0008202: steroid metabolic process | 6.61E-04 |
| 19 | GO:0009638: phototropism | 6.61E-04 |
| 20 | GO:0000266: mitochondrial fission | 8.75E-04 |
| 21 | GO:0055046: microgametogenesis | 9.49E-04 |
| 22 | GO:0009785: blue light signaling pathway | 9.49E-04 |
| 23 | GO:0031408: oxylipin biosynthetic process | 1.44E-03 |
| 24 | GO:0009733: response to auxin | 1.45E-03 |
| 25 | GO:0031348: negative regulation of defense response | 1.52E-03 |
| 26 | GO:0009723: response to ethylene | 1.60E-03 |
| 27 | GO:0048366: leaf development | 1.63E-03 |
| 28 | GO:0009561: megagametogenesis | 1.70E-03 |
| 29 | GO:0051028: mRNA transport | 1.80E-03 |
| 30 | GO:0010087: phloem or xylem histogenesis | 1.89E-03 |
| 31 | GO:0010197: polar nucleus fusion | 1.99E-03 |
| 32 | GO:0042752: regulation of circadian rhythm | 2.09E-03 |
| 33 | GO:0006623: protein targeting to vacuole | 2.19E-03 |
| 34 | GO:0009630: gravitropism | 2.40E-03 |
| 35 | GO:0009737: response to abscisic acid | 3.25E-03 |
| 36 | GO:0006950: response to stress | 3.28E-03 |
| 37 | GO:0009734: auxin-activated signaling pathway | 3.50E-03 |
| 38 | GO:0048767: root hair elongation | 3.63E-03 |
| 39 | GO:0010311: lateral root formation | 3.63E-03 |
| 40 | GO:0048527: lateral root development | 3.88E-03 |
| 41 | GO:0009867: jasmonic acid mediated signaling pathway | 4.13E-03 |
| 42 | GO:0006099: tricarboxylic acid cycle | 4.26E-03 |
| 43 | GO:0051707: response to other organism | 4.91E-03 |
| 44 | GO:0000209: protein polyubiquitination | 5.04E-03 |
| 45 | GO:0009846: pollen germination | 5.74E-03 |
| 46 | GO:0051603: proteolysis involved in cellular protein catabolic process | 6.17E-03 |
| 47 | GO:0051726: regulation of cell cycle | 8.01E-03 |
| 48 | GO:0040008: regulation of growth | 1.09E-02 |
| 49 | GO:0006952: defense response | 1.10E-02 |
| 50 | GO:0010150: leaf senescence | 1.13E-02 |
| 51 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 1.22E-02 |
| 52 | GO:0007166: cell surface receptor signaling pathway | 1.24E-02 |
| 53 | GO:0006970: response to osmotic stress | 1.62E-02 |
| 54 | GO:0007049: cell cycle | 1.66E-02 |
| 55 | GO:0006468: protein phosphorylation | 1.67E-02 |
| 56 | GO:0006869: lipid transport | 2.17E-02 |
| 57 | GO:0009753: response to jasmonic acid | 2.48E-02 |
| 58 | GO:0016567: protein ubiquitination | 2.72E-02 |
| 59 | GO:0009873: ethylene-activated signaling pathway | 2.83E-02 |
| 60 | GO:0009908: flower development | 3.31E-02 |
| 61 | GO:0009416: response to light stimulus | 3.55E-02 |
| 62 | GO:0009555: pollen development | 3.55E-02 |
| 63 | GO:0035556: intracellular signal transduction | 3.69E-02 |
| 64 | GO:0045893: positive regulation of transcription, DNA-templated | 3.92E-02 |
| 65 | GO:0006511: ubiquitin-dependent protein catabolic process | 4.42E-02 |
| 66 | GO:0006414: translational elongation | 4.72E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033550: MAP kinase tyrosine phosphatase activity | 0.00E+00 |
| 2 | GO:0016857: racemase and epimerase activity, acting on carbohydrates and derivatives | 0.00E+00 |
| 3 | GO:0004450: isocitrate dehydrogenase (NADP+) activity | 4.85E-05 |
| 4 | GO:0004750: ribulose-phosphate 3-epimerase activity | 4.85E-05 |
| 5 | GO:0061630: ubiquitin protein ligase activity | 1.58E-04 |
| 6 | GO:0003995: acyl-CoA dehydrogenase activity | 1.78E-04 |
| 7 | GO:0005253: anion channel activity | 1.78E-04 |
| 8 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 2.30E-04 |
| 9 | GO:0005247: voltage-gated chloride channel activity | 2.85E-04 |
| 10 | GO:0031625: ubiquitin protein ligase binding | 4.27E-04 |
| 11 | GO:0004869: cysteine-type endopeptidase inhibitor activity | 4.64E-04 |
| 12 | GO:0008142: oxysterol binding | 5.27E-04 |
| 13 | GO:0004725: protein tyrosine phosphatase activity | 1.18E-03 |
| 14 | GO:0030276: clathrin binding | 1.99E-03 |
| 15 | GO:0004197: cysteine-type endopeptidase activity | 2.40E-03 |
| 16 | GO:0051213: dioxygenase activity | 2.94E-03 |
| 17 | GO:0003746: translation elongation factor activity | 4.13E-03 |
| 18 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 4.38E-03 |
| 19 | GO:0000166: nucleotide binding | 4.40E-03 |
| 20 | GO:0035091: phosphatidylinositol binding | 5.18E-03 |
| 21 | GO:0051287: NAD binding | 5.60E-03 |
| 22 | GO:0004674: protein serine/threonine kinase activity | 9.41E-03 |
| 23 | GO:0005515: protein binding | 1.09E-02 |
| 24 | GO:0008017: microtubule binding | 1.16E-02 |
| 25 | GO:0004842: ubiquitin-protein transferase activity | 1.23E-02 |
| 26 | GO:0000287: magnesium ion binding | 1.52E-02 |
| 27 | GO:0046982: protein heterodimerization activity | 1.52E-02 |
| 28 | GO:0004601: peroxidase activity | 1.54E-02 |
| 29 | GO:0050660: flavin adenine dinucleotide binding | 1.70E-02 |
| 30 | GO:0042803: protein homodimerization activity | 2.10E-02 |
| 31 | GO:0003924: GTPase activity | 2.36E-02 |
| 32 | GO:0008289: lipid binding | 2.99E-02 |
| 33 | GO:0016301: kinase activity | 4.39E-02 |
| 34 | GO:0005507: copper ion binding | 4.57E-02 |
| 35 | GO:0005516: calmodulin binding | 4.75E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071561: nucleus-vacuole junction | 0.00E+00 |
| 2 | GO:0045334: clathrin-coated endocytic vesicle | 1.87E-05 |
| 3 | GO:0034271: phosphatidylinositol 3-kinase complex, class III, type I | 1.87E-05 |
| 4 | GO:0031972: chloroplast intermembrane space | 1.87E-05 |
| 5 | GO:0034272: phosphatidylinositol 3-kinase complex, class III, type II | 1.87E-05 |
| 6 | GO:0031461: cullin-RING ubiquitin ligase complex | 1.30E-04 |
| 7 | GO:0005643: nuclear pore | 1.72E-04 |
| 8 | GO:0034707: chloride channel complex | 2.85E-04 |
| 9 | GO:0000794: condensed nuclear chromosome | 4.02E-04 |
| 10 | GO:0048471: perinuclear region of cytoplasm | 8.02E-04 |
| 11 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 1.52E-03 |
| 12 | GO:0005770: late endosome | 1.99E-03 |
| 13 | GO:0009504: cell plate | 2.19E-03 |
| 14 | GO:0000151: ubiquitin ligase complex | 3.51E-03 |
| 15 | GO:0005819: spindle | 4.38E-03 |
| 16 | GO:0005777: peroxisome | 5.05E-03 |
| 17 | GO:0005635: nuclear envelope | 6.32E-03 |
| 18 | GO:0005622: intracellular | 7.80E-03 |
| 19 | GO:0009524: phragmoplast | 9.33E-03 |
| 20 | GO:0005737: cytoplasm | 9.93E-03 |
| 21 | GO:0009705: plant-type vacuole membrane | 1.13E-02 |
| 22 | GO:0005615: extracellular space | 1.22E-02 |
| 23 | GO:0005874: microtubule | 1.75E-02 |
| 24 | GO:0005886: plasma membrane | 3.13E-02 |
| 25 | GO:0005773: vacuole | 4.73E-02 |