co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G38660

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0042425: choline biosynthetic process	0.00E+00
2	GO:1905499: trichome papilla formation	0.00E+00
3	GO:0006642: triglyceride mobilization	0.00E+00
4	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
5	GO:0097164: ammonium ion metabolic process	0.00E+00
6	GO:0010442: guard cell morphogenesis	3.25E-05
7	GO:0043007: maintenance of rDNA	3.25E-05
8	GO:0046166: glyceraldehyde-3-phosphate biosynthetic process	3.25E-05
9	GO:0070981: L-asparagine biosynthetic process	8.18E-05
10	GO:0071258: cellular response to gravity	8.18E-05
11	GO:0006529: asparagine biosynthetic process	8.18E-05
12	GO:0052541: plant-type cell wall cellulose metabolic process	8.18E-05
13	GO:0042335: cuticle development	1.33E-04
14	GO:0019563: glycerol catabolic process	1.42E-04
15	GO:0032504: multicellular organism reproduction	1.42E-04
16	GO:0006021: inositol biosynthetic process	2.85E-04
17	GO:0015976: carbon utilization	2.85E-04
18	GO:0006665: sphingolipid metabolic process	3.65E-04
19	GO:0048359: mucilage metabolic process involved in seed coat development	3.65E-04
20	GO:0006656: phosphatidylcholine biosynthetic process	3.65E-04
21	GO:0046855: inositol phosphate dephosphorylation	4.48E-04
22	GO:0048280: vesicle fusion with Golgi apparatus	5.36E-04
23	GO:0009554: megasporogenesis	5.36E-04
24	GO:0048528: post-embryonic root development	6.27E-04
25	GO:0042538: hyperosmotic salinity response	7.02E-04
26	GO:0006096: glycolytic process	8.81E-04
27	GO:0015780: nucleotide-sugar transport	9.20E-04
28	GO:0042761: very long-chain fatty acid biosynthetic process	1.02E-03
29	GO:0006896: Golgi to vacuole transport	1.13E-03
30	GO:0000038: very long-chain fatty acid metabolic process	1.24E-03
31	GO:0006790: sulfur compound metabolic process	1.36E-03
32	GO:0006094: gluconeogenesis	1.47E-03
33	GO:0006541: glutamine metabolic process	1.60E-03
34	GO:0019253: reductive pentose-phosphate cycle	1.60E-03
35	GO:0006633: fatty acid biosynthetic process	1.62E-03
36	GO:0019853: L-ascorbic acid biosynthetic process	1.72E-03
37	GO:0046854: phosphatidylinositol phosphorylation	1.72E-03
38	GO:0010025: wax biosynthetic process	1.85E-03
39	GO:0006071: glycerol metabolic process	1.85E-03
40	GO:0010026: trichome differentiation	2.12E-03
41	GO:0007017: microtubule-based process	2.12E-03
42	GO:0010091: trichome branching	2.69E-03
43	GO:0042147: retrograde transport, endosome to Golgi	2.84E-03
44	GO:0009860: pollen tube growth	2.93E-03
45	GO:0080022: primary root development	3.00E-03
46	GO:0009646: response to absence of light	3.31E-03
47	GO:0006623: protein targeting to vacuole	3.47E-03
48	GO:0010183: pollen tube guidance	3.47E-03
49	GO:0006891: intra-Golgi vesicle-mediated transport	3.63E-03
50	GO:0006869: lipid transport	4.40E-03
51	GO:0000910: cytokinesis	4.49E-03
52	GO:0016126: sterol biosynthetic process	4.67E-03
53	GO:0032259: methylation	4.73E-03
54	GO:0010411: xyloglucan metabolic process	5.22E-03
55	GO:0006888: ER to Golgi vesicle-mediated transport	5.22E-03
56	GO:0009813: flavonoid biosynthetic process	5.80E-03
57	GO:0006631: fatty acid metabolic process	7.43E-03
58	GO:0042546: cell wall biogenesis	8.09E-03
59	GO:0008643: carbohydrate transport	8.31E-03
60	GO:0009793: embryo development ending in seed dormancy	8.75E-03
61	GO:0009555: pollen development	8.75E-03
62	GO:0071555: cell wall organization	1.78E-02
63	GO:0008380: RNA splicing	2.07E-02
64	GO:0009826: unidimensional cell growth	2.43E-02
65	GO:0009658: chloroplast organization	2.50E-02
66	GO:0080167: response to karrikin	2.91E-02
67	GO:0016042: lipid catabolic process	3.76E-02
68	GO:0006629: lipid metabolic process	3.84E-02
69	GO:0006281: DNA repair	3.84E-02
70	GO:0006397: mRNA processing	3.96E-02
71	GO:0016310: phosphorylation	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0050613: delta14-sterol reductase activity	0.00E+00
2	GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity	0.00E+00
3	GO:0009374: biotin binding	3.25E-05
4	GO:0010347: L-galactose-1-phosphate phosphatase activity	3.25E-05
5	GO:0030794: (S)-coclaurine-N-methyltransferase activity	3.25E-05
6	GO:0004807: triose-phosphate isomerase activity	3.25E-05
7	GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity	3.25E-05
8	GO:0004071: aspartate-ammonia ligase activity	3.25E-05
9	GO:0000234: phosphoethanolamine N-methyltransferase activity	8.18E-05
10	GO:0052832: inositol monophosphate 3-phosphatase activity	8.18E-05
11	GO:0008934: inositol monophosphate 1-phosphatase activity	8.18E-05
12	GO:0052833: inositol monophosphate 4-phosphatase activity	8.18E-05
13	GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity	8.18E-05
14	GO:0005504: fatty acid binding	1.42E-04
15	GO:0004148: dihydrolipoyl dehydrogenase activity	1.42E-04
16	GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity	2.11E-04
17	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	2.11E-04
18	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	2.11E-04
19	GO:0005200: structural constituent of cytoskeleton	2.37E-04
20	GO:0045430: chalcone isomerase activity	2.85E-04
21	GO:0004045: aminoacyl-tRNA hydrolase activity	2.85E-04
22	GO:0003989: acetyl-CoA carboxylase activity	3.65E-04
23	GO:0009922: fatty acid elongase activity	3.65E-04
24	GO:0004040: amidase activity	3.65E-04
25	GO:0051753: mannan synthase activity	5.36E-04
26	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	5.36E-04
27	GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors	9.20E-04
28	GO:0008889: glycerophosphodiester phosphodiesterase activity	9.20E-04
29	GO:0004089: carbonate dehydratase activity	1.47E-03
30	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	1.85E-03
31	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	1.85E-03
32	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	1.85E-03
33	GO:0008168: methyltransferase activity	2.62E-03
34	GO:0008514: organic anion transmembrane transporter activity	2.69E-03
35	GO:0003713: transcription coactivator activity	3.15E-03
36	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.63E-03
37	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.32E-03
38	GO:0016798: hydrolase activity, acting on glycosyl bonds	5.22E-03
39	GO:0008289: lipid binding	6.86E-03
40	GO:0000149: SNARE binding	7.01E-03
41	GO:0005484: SNAP receptor activity	7.87E-03
42	GO:0008565: protein transporter activity	1.65E-02
43	GO:0016788: hydrolase activity, acting on ester bonds	2.53E-02
44	GO:0052689: carboxylic ester hydrolase activity	3.12E-02
45	GO:0042803: protein homodimerization activity	3.42E-02

Rank	GO Term	Adjusted P value
1	GO:0046658: anchored component of plasma membrane	3.82E-07
2	GO:0009570: chloroplast stroma	1.24E-05
3	GO:0045298: tubulin complex	1.58E-05
4	GO:0009923: fatty acid elongase complex	3.25E-05
5	GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex	3.25E-05
6	GO:0031225: anchored component of membrane	3.38E-05
7	GO:0009317: acetyl-CoA carboxylase complex	1.42E-04
8	GO:0012507: ER to Golgi transport vesicle membrane	7.22E-04
9	GO:0030176: integral component of endoplasmic reticulum membrane	1.72E-03
10	GO:0009506: plasmodesma	1.95E-03
11	GO:0005886: plasma membrane	3.14E-03
12	GO:0048046: apoplast	3.46E-03
13	GO:0009504: cell plate	3.47E-03
14	GO:0030529: intracellular ribonucleoprotein complex	4.67E-03
15	GO:0009941: chloroplast envelope	5.11E-03
16	GO:0031902: late endosome membrane	7.43E-03
17	GO:0031201: SNARE complex	7.43E-03
18	GO:0005618: cell wall	1.73E-02
19	GO:0009505: plant-type cell wall	2.23E-02
20	GO:0000139: Golgi membrane	2.41E-02
21	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.67E-02
22	GO:0005789: endoplasmic reticulum membrane	2.72E-02
23	GO:0009507: chloroplast	2.92E-02
24	GO:0005829: cytosol	3.49E-02
25	GO:0005794: Golgi apparatus	3.78E-02