Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G38600

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0035278: miRNA mediated inhibition of translation0.00E+00
2GO:1904580: regulation of intracellular mRNA localization0.00E+00
3GO:0008361: regulation of cell size2.80E-05
4GO:0071902: positive regulation of protein serine/threonine kinase activity2.88E-05
5GO:0080136: priming of cellular response to stress2.88E-05
6GO:0007033: vacuole organization4.35E-05
7GO:0007030: Golgi organization4.35E-05
8GO:0043631: RNA polyadenylation7.28E-05
9GO:0009660: amyloplast organization7.28E-05
10GO:0010506: regulation of autophagy1.27E-04
11GO:0071230: cellular response to amino acid stimulus1.27E-04
12GO:0007032: endosome organization1.27E-04
13GO:0031929: TOR signaling1.27E-04
14GO:0045836: positive regulation of meiotic nuclear division1.27E-04
15GO:2000034: regulation of seed maturation1.27E-04
16GO:0080119: ER body organization1.89E-04
17GO:2000038: regulation of stomatal complex development2.57E-04
18GO:0042594: response to starvation2.57E-04
19GO:0045723: positive regulation of fatty acid biosynthetic process2.57E-04
20GO:0016049: cell growth2.85E-04
21GO:0016558: protein import into peroxisome matrix3.30E-04
22GO:0007029: endoplasmic reticulum organization3.30E-04
23GO:0032876: negative regulation of DNA endoreduplication3.30E-04
24GO:0045927: positive regulation of growth3.30E-04
25GO:0006886: intracellular protein transport4.04E-04
26GO:0009959: negative gravitropism4.06E-04
27GO:0048232: male gamete generation4.06E-04
28GO:0009267: cellular response to starvation4.06E-04
29GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione4.06E-04
30GO:0033962: cytoplasmic mRNA processing body assembly4.86E-04
31GO:2000037: regulation of stomatal complex patterning4.86E-04
32GO:0006333: chromatin assembly or disassembly5.68E-04
33GO:0030307: positive regulation of cell growth5.68E-04
34GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway5.68E-04
35GO:0006368: transcription elongation from RNA polymerase II promoter5.68E-04
36GO:1900150: regulation of defense response to fungus6.55E-04
37GO:0010120: camalexin biosynthetic process7.44E-04
38GO:0006972: hyperosmotic response7.44E-04
39GO:0009932: cell tip growth7.44E-04
40GO:0006378: mRNA polyadenylation1.13E-03
41GO:0010229: inflorescence development1.34E-03
42GO:0007034: vacuolar transport1.45E-03
43GO:0010223: secondary shoot formation1.45E-03
44GO:0010150: leaf senescence1.53E-03
45GO:0010030: positive regulation of seed germination1.56E-03
46GO:0009825: multidimensional cell growth1.56E-03
47GO:0051321: meiotic cell cycle2.04E-03
48GO:0003333: amino acid transmembrane transport2.04E-03
49GO:0048278: vesicle docking2.04E-03
50GO:0009306: protein secretion2.43E-03
51GO:0071472: cellular response to salt stress2.84E-03
52GO:0061025: membrane fusion2.99E-03
53GO:0006623: protein targeting to vacuole3.13E-03
54GO:0010183: pollen tube guidance3.13E-03
55GO:0000302: response to reactive oxygen species3.28E-03
56GO:0006891: intra-Golgi vesicle-mediated transport3.28E-03
57GO:0006635: fatty acid beta-oxidation3.28E-03
58GO:0010090: trichome morphogenesis3.58E-03
59GO:0071805: potassium ion transmembrane transport3.89E-03
60GO:0006906: vesicle fusion4.54E-03
61GO:0006888: ER to Golgi vesicle-mediated transport4.71E-03
62GO:0048481: plant ovule development5.05E-03
63GO:0006499: N-terminal protein myristoylation5.40E-03
64GO:0006897: endocytosis6.69E-03
65GO:0042542: response to hydrogen peroxide6.89E-03
66GO:0051301: cell division8.18E-03
67GO:0006813: potassium ion transport8.71E-03
68GO:0010224: response to UV-B8.92E-03
69GO:0006096: glycolytic process9.79E-03
70GO:0009626: plant-type hypersensitive response1.02E-02
71GO:0009620: response to fungus1.05E-02
72GO:0010468: regulation of gene expression1.86E-02
73GO:0009826: unidimensional cell growth2.18E-02
74GO:0006970: response to osmotic stress2.36E-02
75GO:0009723: response to ethylene2.48E-02
76GO:0010200: response to chitin2.67E-02
77GO:0007165: signal transduction3.18E-02
78GO:0009737: response to abscisic acid3.25E-02
79GO:0009751: response to salicylic acid3.41E-02
80GO:0009793: embryo development ending in seed dormancy3.53E-02
81GO:0006397: mRNA processing3.55E-02
82GO:0048364: root development3.55E-02
83GO:0009908: flower development4.82E-02
RankGO TermAdjusted P value
1GO:0004652: polynucleotide adenylyltransferase activity1.89E-04
2GO:0004416: hydroxyacylglutathione hydrolase activity1.89E-04
3GO:0004332: fructose-bisphosphate aldolase activity4.06E-04
4GO:0030674: protein binding, bridging6.55E-04
5GO:0031490: chromatin DNA binding9.29E-04
6GO:0015174: basic amino acid transmembrane transporter activity9.29E-04
7GO:0000166: nucleotide binding1.03E-03
8GO:0015079: potassium ion transmembrane transporter activity1.92E-03
9GO:0004707: MAP kinase activity2.04E-03
10GO:0016779: nucleotidyltransferase activity2.17E-03
11GO:0003713: transcription coactivator activity2.84E-03
12GO:0004672: protein kinase activity4.04E-03
13GO:0005515: protein binding5.51E-03
14GO:0000149: SNARE binding6.31E-03
15GO:0004712: protein serine/threonine/tyrosine kinase activity6.31E-03
16GO:0005484: SNAP receptor activity7.08E-03
17GO:0015171: amino acid transmembrane transporter activity9.36E-03
18GO:0004386: helicase activity1.19E-02
19GO:0004252: serine-type endopeptidase activity1.41E-02
20GO:0008565: protein transporter activity1.48E-02
21GO:0003682: chromatin binding2.33E-02
RankGO TermAdjusted P value
1GO:0070449: elongin complex0.00E+00
2GO:0031931: TORC1 complex1.27E-04
3GO:0000932: P-body2.28E-04
4GO:0080008: Cul4-RING E3 ubiquitin ligase complex2.61E-04
5GO:0031011: Ino80 complex3.30E-04
6GO:0030127: COPII vesicle coat4.06E-04
7GO:0005774: vacuolar membrane5.16E-04
8GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane5.68E-04
9GO:0009574: preprophase band1.34E-03
10GO:0005795: Golgi stack1.56E-03
11GO:0005802: trans-Golgi network1.85E-03
12GO:0005770: late endosome2.84E-03
13GO:0005778: peroxisomal membrane3.89E-03
14GO:0000151: ubiquitin ligase complex5.05E-03
15GO:0005634: nucleus6.29E-03
16GO:0031201: SNARE complex6.69E-03
17GO:0005834: heterotrimeric G-protein complex1.02E-02
18GO:0005623: cell1.33E-02
19GO:0005622: intracellular1.34E-02
20GO:0009524: phragmoplast1.36E-02
21GO:0009705: plant-type vacuole membrane1.64E-02
22GO:0005773: vacuole2.06E-02
23GO:0043231: intracellular membrane-bounded organelle3.70E-02
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Gene type



Gene DE type