GO Enrichment Analysis of Co-expressed Genes with
AT4G35850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 2 | GO:0043461: proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 3 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 5 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 6 | GO:0070476: rRNA (guanine-N7)-methylation | 0.00E+00 |
| 7 | GO:0046686: response to cadmium ion | 9.63E-06 |
| 8 | GO:0006390: transcription from mitochondrial promoter | 5.34E-05 |
| 9 | GO:2000232: regulation of rRNA processing | 5.34E-05 |
| 10 | GO:0043687: post-translational protein modification | 5.34E-05 |
| 11 | GO:0051775: response to redox state | 5.34E-05 |
| 12 | GO:0045039: protein import into mitochondrial inner membrane | 2.22E-04 |
| 13 | GO:0055074: calcium ion homeostasis | 2.22E-04 |
| 14 | GO:0007276: gamete generation | 3.25E-04 |
| 15 | GO:0000460: maturation of 5.8S rRNA | 4.35E-04 |
| 16 | GO:0051205: protein insertion into membrane | 4.35E-04 |
| 17 | GO:0009617: response to bacterium | 4.64E-04 |
| 18 | GO:0009697: salicylic acid biosynthetic process | 5.52E-04 |
| 19 | GO:0018279: protein N-linked glycosylation via asparagine | 5.52E-04 |
| 20 | GO:0006564: L-serine biosynthetic process | 5.52E-04 |
| 21 | GO:0006461: protein complex assembly | 5.52E-04 |
| 22 | GO:0047484: regulation of response to osmotic stress | 6.76E-04 |
| 23 | GO:0000470: maturation of LSU-rRNA | 6.76E-04 |
| 24 | GO:0042372: phylloquinone biosynthetic process | 8.05E-04 |
| 25 | GO:0006458: 'de novo' protein folding | 8.05E-04 |
| 26 | GO:0009423: chorismate biosynthetic process | 8.05E-04 |
| 27 | GO:0006099: tricarboxylic acid cycle | 8.46E-04 |
| 28 | GO:0045454: cell redox homeostasis | 1.04E-03 |
| 29 | GO:0006102: isocitrate metabolic process | 1.08E-03 |
| 30 | GO:0006875: cellular metal ion homeostasis | 1.08E-03 |
| 31 | GO:0006189: 'de novo' IMP biosynthetic process | 1.38E-03 |
| 32 | GO:0098656: anion transmembrane transport | 1.38E-03 |
| 33 | GO:0009073: aromatic amino acid family biosynthetic process | 1.88E-03 |
| 34 | GO:0009651: response to salt stress | 2.01E-03 |
| 35 | GO:0006790: sulfur compound metabolic process | 2.06E-03 |
| 36 | GO:0006820: anion transport | 2.06E-03 |
| 37 | GO:0006094: gluconeogenesis | 2.25E-03 |
| 38 | GO:0046688: response to copper ion | 2.63E-03 |
| 39 | GO:0046854: phosphatidylinositol phosphorylation | 2.63E-03 |
| 40 | GO:0009555: pollen development | 2.78E-03 |
| 41 | GO:0034976: response to endoplasmic reticulum stress | 2.83E-03 |
| 42 | GO:0006825: copper ion transport | 3.24E-03 |
| 43 | GO:0051302: regulation of cell division | 3.24E-03 |
| 44 | GO:0061077: chaperone-mediated protein folding | 3.46E-03 |
| 45 | GO:0031348: negative regulation of defense response | 3.68E-03 |
| 46 | GO:0006457: protein folding | 3.86E-03 |
| 47 | GO:0009561: megagametogenesis | 4.13E-03 |
| 48 | GO:0010501: RNA secondary structure unwinding | 4.60E-03 |
| 49 | GO:0000413: protein peptidyl-prolyl isomerization | 4.60E-03 |
| 50 | GO:0010118: stomatal movement | 4.60E-03 |
| 51 | GO:0010154: fruit development | 4.84E-03 |
| 52 | GO:0006635: fatty acid beta-oxidation | 5.60E-03 |
| 53 | GO:0080156: mitochondrial mRNA modification | 5.60E-03 |
| 54 | GO:0009627: systemic acquired resistance | 7.79E-03 |
| 55 | GO:0016311: dephosphorylation | 8.38E-03 |
| 56 | GO:0048481: plant ovule development | 8.68E-03 |
| 57 | GO:0009409: response to cold | 9.99E-03 |
| 58 | GO:0042542: response to hydrogen peroxide | 1.19E-02 |
| 59 | GO:0009744: response to sucrose | 1.23E-02 |
| 60 | GO:0000154: rRNA modification | 1.33E-02 |
| 61 | GO:0009846: pollen germination | 1.44E-02 |
| 62 | GO:0006364: rRNA processing | 1.51E-02 |
| 63 | GO:0006096: glycolytic process | 1.70E-02 |
| 64 | GO:0048316: seed development | 1.74E-02 |
| 65 | GO:0009793: embryo development ending in seed dormancy | 1.97E-02 |
| 66 | GO:0006414: translational elongation | 2.47E-02 |
| 67 | GO:0006413: translational initiation | 2.73E-02 |
| 68 | GO:0006979: response to oxidative stress | 3.38E-02 |
| 69 | GO:0042254: ribosome biogenesis | 3.96E-02 |
| 70 | GO:0009860: pollen tube growth | 4.12E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016312: inositol bisphosphate phosphatase activity | 0.00E+00 |
| 2 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 3 | GO:0016435: rRNA (guanine) methyltransferase activity | 0.00E+00 |
| 4 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 5 | GO:0043021: ribonucleoprotein complex binding | 1.70E-07 |
| 6 | GO:0003746: translation elongation factor activity | 1.19E-06 |
| 7 | GO:0000166: nucleotide binding | 3.93E-06 |
| 8 | GO:0048037: cofactor binding | 5.34E-05 |
| 9 | GO:0008909: isochorismate synthase activity | 5.34E-05 |
| 10 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 5.34E-05 |
| 11 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 5.34E-05 |
| 12 | GO:0051287: NAD binding | 9.15E-05 |
| 13 | GO:0004776: succinate-CoA ligase (GDP-forming) activity | 1.30E-04 |
| 14 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.30E-04 |
| 15 | GO:0004775: succinate-CoA ligase (ADP-forming) activity | 1.30E-04 |
| 16 | GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity | 2.22E-04 |
| 17 | GO:0016531: copper chaperone activity | 2.22E-04 |
| 18 | GO:0004148: dihydrolipoyl dehydrogenase activity | 2.22E-04 |
| 19 | GO:0019003: GDP binding | 2.22E-04 |
| 20 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 3.25E-04 |
| 21 | GO:0004449: isocitrate dehydrogenase (NAD+) activity | 3.25E-04 |
| 22 | GO:0004576: oligosaccharyl transferase activity | 4.35E-04 |
| 23 | GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity | 5.52E-04 |
| 24 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 6.76E-04 |
| 25 | GO:0050897: cobalt ion binding | 7.44E-04 |
| 26 | GO:0005507: copper ion binding | 7.72E-04 |
| 27 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 8.05E-04 |
| 28 | GO:0030515: snoRNA binding | 9.40E-04 |
| 29 | GO:0005525: GTP binding | 9.57E-04 |
| 30 | GO:0015288: porin activity | 1.08E-03 |
| 31 | GO:0008135: translation factor activity, RNA binding | 1.23E-03 |
| 32 | GO:0008308: voltage-gated anion channel activity | 1.23E-03 |
| 33 | GO:0044183: protein binding involved in protein folding | 1.88E-03 |
| 34 | GO:0051082: unfolded protein binding | 1.93E-03 |
| 35 | GO:0004190: aspartic-type endopeptidase activity | 2.63E-03 |
| 36 | GO:0003756: protein disulfide isomerase activity | 4.13E-03 |
| 37 | GO:0003713: transcription coactivator activity | 4.84E-03 |
| 38 | GO:0010181: FMN binding | 5.09E-03 |
| 39 | GO:0016597: amino acid binding | 6.94E-03 |
| 40 | GO:0004004: ATP-dependent RNA helicase activity | 8.09E-03 |
| 41 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 8.68E-03 |
| 42 | GO:0003924: GTPase activity | 9.31E-03 |
| 43 | GO:0003697: single-stranded DNA binding | 1.02E-02 |
| 44 | GO:0050661: NADP binding | 1.12E-02 |
| 45 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.37E-02 |
| 46 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.51E-02 |
| 47 | GO:0003735: structural constituent of ribosome | 1.63E-02 |
| 48 | GO:0015035: protein disulfide oxidoreductase activity | 1.98E-02 |
| 49 | GO:0008026: ATP-dependent helicase activity | 2.02E-02 |
| 50 | GO:0004386: helicase activity | 2.07E-02 |
| 51 | GO:0005509: calcium ion binding | 3.10E-02 |
| 52 | GO:0003743: translation initiation factor activity | 3.20E-02 |
| 53 | GO:0000287: magnesium ion binding | 3.86E-02 |
| 54 | GO:0050660: flavin adenine dinucleotide binding | 4.34E-02 |
| 55 | GO:0008233: peptidase activity | 4.50E-02 |
| 56 | GO:0005524: ATP binding | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0019034: viral replication complex | 0.00E+00 |
| 2 | GO:0070545: PeBoW complex | 0.00E+00 |
| 3 | GO:0005832: chaperonin-containing T-complex | 0.00E+00 |
| 4 | GO:0005739: mitochondrion | 2.59E-09 |
| 5 | GO:0030687: preribosome, large subunit precursor | 1.59E-05 |
| 6 | GO:0034245: mitochondrial DNA-directed RNA polymerase complex | 5.34E-05 |
| 7 | GO:0005783: endoplasmic reticulum | 1.27E-04 |
| 8 | GO:0005834: heterotrimeric G-protein complex | 1.49E-04 |
| 9 | GO:0009536: plastid | 3.41E-04 |
| 10 | GO:0030660: Golgi-associated vesicle membrane | 4.35E-04 |
| 11 | GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane | 4.35E-04 |
| 12 | GO:0005788: endoplasmic reticulum lumen | 5.28E-04 |
| 13 | GO:0008250: oligosaccharyltransferase complex | 5.52E-04 |
| 14 | GO:0005730: nucleolus | 6.09E-04 |
| 15 | GO:0031428: box C/D snoRNP complex | 6.76E-04 |
| 16 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 7.20E-04 |
| 17 | GO:0005762: mitochondrial large ribosomal subunit | 8.05E-04 |
| 18 | GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane | 1.08E-03 |
| 19 | GO:0046930: pore complex | 1.23E-03 |
| 20 | GO:0009507: chloroplast | 1.43E-03 |
| 21 | GO:0005747: mitochondrial respiratory chain complex I | 1.66E-03 |
| 22 | GO:0005740: mitochondrial envelope | 1.71E-03 |
| 23 | GO:0005765: lysosomal membrane | 1.88E-03 |
| 24 | GO:0005852: eukaryotic translation initiation factor 3 complex | 1.88E-03 |
| 25 | GO:0032040: small-subunit processome | 2.06E-03 |
| 26 | GO:0005774: vacuolar membrane | 2.12E-03 |
| 27 | GO:0005654: nucleoplasm | 2.35E-03 |
| 28 | GO:0043234: protein complex | 2.83E-03 |
| 29 | GO:0005758: mitochondrial intermembrane space | 3.03E-03 |
| 30 | GO:0005741: mitochondrial outer membrane | 3.46E-03 |
| 31 | GO:0015934: large ribosomal subunit | 9.61E-03 |
| 32 | GO:0005618: cell wall | 1.05E-02 |
| 33 | GO:0005773: vacuole | 1.63E-02 |
| 34 | GO:0005759: mitochondrial matrix | 2.68E-02 |
| 35 | GO:0048046: apoplast | 3.46E-02 |