co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G35470

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0090627: plant epidermal cell differentiation	0.00E+00
3	GO:0045014: negative regulation of transcription by glucose	0.00E+00
4	GO:0048443: stamen development	3.10E-05
5	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	7.61E-05
6	GO:0015808: L-alanine transport	1.20E-04
7	GO:0010480: microsporocyte differentiation	1.20E-04
8	GO:0031338: regulation of vesicle fusion	1.20E-04
9	GO:0033206: meiotic cytokinesis	1.20E-04
10	GO:0043087: regulation of GTPase activity	1.20E-04
11	GO:0015936: coenzyme A metabolic process	1.20E-04
12	GO:0009638: phototropism	1.41E-04
13	GO:0010152: pollen maturation	2.26E-04
14	GO:0043255: regulation of carbohydrate biosynthetic process	2.77E-04
15	GO:0046373: L-arabinose metabolic process	2.77E-04
16	GO:1901959: positive regulation of cutin biosynthetic process	2.77E-04
17	GO:0010541: acropetal auxin transport	2.77E-04
18	GO:0098712: L-glutamate import across plasma membrane	2.77E-04
19	GO:0015804: neutral amino acid transport	2.77E-04
20	GO:0010540: basipetal auxin transport	2.94E-04
21	GO:0009825: multidimensional cell growth	3.30E-04
22	GO:0010053: root epidermal cell differentiation	3.30E-04
23	GO:0010160: formation of animal organ boundary	4.58E-04
24	GO:1904278: positive regulation of wax biosynthetic process	4.58E-04
25	GO:0080055: low-affinity nitrate transport	4.58E-04
26	GO:0045493: xylan catabolic process	4.58E-04
27	GO:0090630: activation of GTPase activity	4.58E-04
28	GO:0080170: hydrogen peroxide transmembrane transport	6.57E-04
29	GO:0043481: anthocyanin accumulation in tissues in response to UV light	6.57E-04
30	GO:0010088: phloem development	6.57E-04
31	GO:1901332: negative regulation of lateral root development	6.57E-04
32	GO:0051639: actin filament network formation	6.57E-04
33	GO:0006085: acetyl-CoA biosynthetic process	8.72E-04
34	GO:0045727: positive regulation of translation	8.72E-04
35	GO:0045723: positive regulation of fatty acid biosynthetic process	8.72E-04
36	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	8.72E-04
37	GO:0006808: regulation of nitrogen utilization	8.72E-04
38	GO:0051764: actin crosslink formation	8.72E-04
39	GO:0048825: cotyledon development	9.17E-04
40	GO:2000762: regulation of phenylpropanoid metabolic process	1.10E-03
41	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	1.35E-03
42	GO:0009913: epidermal cell differentiation	1.35E-03
43	GO:0060918: auxin transport	1.35E-03
44	GO:0010337: regulation of salicylic acid metabolic process	1.35E-03
45	GO:0006751: glutathione catabolic process	1.35E-03
46	GO:0048827: phyllome development	1.35E-03
47	GO:0042549: photosystem II stabilization	1.35E-03
48	GO:0009873: ethylene-activated signaling pathway	1.43E-03
49	GO:2000033: regulation of seed dormancy process	1.61E-03
50	GO:0030244: cellulose biosynthetic process	1.81E-03
51	GO:0048437: floral organ development	1.89E-03
52	GO:0010311: lateral root formation	1.89E-03
53	GO:0043090: amino acid import	1.89E-03
54	GO:0010218: response to far red light	1.99E-03
55	GO:0009733: response to auxin	2.00E-03
56	GO:0009938: negative regulation of gibberellic acid mediated signaling pathway	2.19E-03
57	GO:0070413: trehalose metabolism in response to stress	2.19E-03
58	GO:0009867: jasmonic acid mediated signaling pathway	2.28E-03
59	GO:0009416: response to light stimulus	2.32E-03
60	GO:0010233: phloem transport	2.50E-03
61	GO:0032544: plastid translation	2.50E-03
62	GO:0009932: cell tip growth	2.50E-03
63	GO:0048507: meristem development	2.82E-03
64	GO:0090305: nucleic acid phosphodiester bond hydrolysis	2.82E-03
65	GO:0048589: developmental growth	2.82E-03
66	GO:0009640: photomorphogenesis	2.93E-03
67	GO:0009723: response to ethylene	2.96E-03
68	GO:0046777: protein autophosphorylation	3.51E-03
69	GO:0006032: chitin catabolic process	3.51E-03
70	GO:0010215: cellulose microfibril organization	3.51E-03
71	GO:0009664: plant-type cell wall organization	3.66E-03
72	GO:1903507: negative regulation of nucleic acid-templated transcription	3.88E-03
73	GO:0048229: gametophyte development	3.88E-03
74	GO:0008361: regulation of cell size	4.26E-03
75	GO:0010102: lateral root morphogenesis	4.64E-03
76	GO:0009785: blue light signaling pathway	4.64E-03
77	GO:0010229: inflorescence development	4.64E-03
78	GO:0009718: anthocyanin-containing compound biosynthetic process	4.64E-03
79	GO:0010075: regulation of meristem growth	4.64E-03
80	GO:0009887: animal organ morphogenesis	5.04E-03
81	GO:0009934: regulation of meristem structural organization	5.04E-03
82	GO:0006629: lipid metabolic process	5.29E-03
83	GO:0010167: response to nitrate	5.46E-03
84	GO:0010030: positive regulation of seed germination	5.46E-03
85	GO:0006833: water transport	5.88E-03
86	GO:0007165: signal transduction	5.91E-03
87	GO:0008152: metabolic process	5.99E-03
88	GO:0009863: salicylic acid mediated signaling pathway	6.32E-03
89	GO:0010187: negative regulation of seed germination	6.32E-03
90	GO:0051017: actin filament bundle assembly	6.32E-03
91	GO:0006289: nucleotide-excision repair	6.32E-03
92	GO:2000377: regulation of reactive oxygen species metabolic process	6.32E-03
93	GO:0005992: trehalose biosynthetic process	6.32E-03
94	GO:0008299: isoprenoid biosynthetic process	6.76E-03
95	GO:0016998: cell wall macromolecule catabolic process	7.22E-03
96	GO:2000022: regulation of jasmonic acid mediated signaling pathway	7.69E-03
97	GO:0009686: gibberellin biosynthetic process	8.18E-03
98	GO:0009734: auxin-activated signaling pathway	8.18E-03
99	GO:0006284: base-excision repair	8.66E-03
100	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	9.17E-03
101	GO:0009908: flower development	9.64E-03
102	GO:0000271: polysaccharide biosynthetic process	9.68E-03
103	GO:0034220: ion transmembrane transport	9.68E-03
104	GO:0048653: anther development	9.68E-03
105	GO:0042631: cellular response to water deprivation	9.68E-03
106	GO:0045489: pectin biosynthetic process	1.02E-02
107	GO:0010305: leaf vascular tissue pattern formation	1.02E-02
108	GO:0009958: positive gravitropism	1.02E-02
109	GO:0006662: glycerol ether metabolic process	1.02E-02
110	GO:0010268: brassinosteroid homeostasis	1.02E-02
111	GO:0007018: microtubule-based movement	1.07E-02
112	GO:0016567: protein ubiquitination	1.14E-02
113	GO:0016132: brassinosteroid biosynthetic process	1.18E-02
114	GO:0005975: carbohydrate metabolic process	1.27E-02
115	GO:0071281: cellular response to iron ion	1.30E-02
116	GO:0009651: response to salt stress	1.35E-02
117	GO:0009639: response to red or far red light	1.36E-02
118	GO:0016125: sterol metabolic process	1.36E-02
119	GO:0071805: potassium ion transmembrane transport	1.41E-02
120	GO:0009911: positive regulation of flower development	1.54E-02
121	GO:0016126: sterol biosynthetic process	1.54E-02
122	GO:0010029: regulation of seed germination	1.60E-02
123	GO:0007049: cell cycle	1.67E-02
124	GO:0015995: chlorophyll biosynthetic process	1.72E-02
125	GO:0007275: multicellular organism development	1.88E-02
126	GO:0048527: lateral root development	2.05E-02
127	GO:0009910: negative regulation of flower development	2.05E-02
128	GO:0006468: protein phosphorylation	2.10E-02
129	GO:0016051: carbohydrate biosynthetic process	2.19E-02
130	GO:0009637: response to blue light	2.19E-02
131	GO:0034599: cellular response to oxidative stress	2.26E-02
132	GO:0009926: auxin polar transport	2.63E-02
133	GO:0071555: cell wall organization	2.67E-02
134	GO:0048364: root development	2.86E-02
135	GO:0031347: regulation of defense response	3.01E-02
136	GO:0042538: hyperosmotic salinity response	3.09E-02
137	GO:0009809: lignin biosynthetic process	3.25E-02
138	GO:0006364: rRNA processing	3.25E-02
139	GO:0009585: red, far-red light phototransduction	3.25E-02
140	GO:0006813: potassium ion transport	3.25E-02
141	GO:0006857: oligopeptide transport	3.41E-02
142	GO:0006508: proteolysis	3.62E-02
143	GO:0009740: gibberellic acid mediated signaling pathway	4.00E-02
144	GO:0009624: response to nematode	4.17E-02
145	GO:0006810: transport	4.29E-02
146	GO:0009735: response to cytokinin	4.44E-02

Rank	GO Term	Adjusted P value
1	GO:0038198: auxin receptor activity	0.00E+00
2	GO:0005096: GTPase activator activity	8.14E-06
3	GO:0010011: auxin binding	1.22E-05
4	GO:0051777: ent-kaurenoate oxidase activity	1.20E-04
5	GO:0050139: nicotinate-N-glucosyltransferase activity	1.20E-04
6	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	1.20E-04
7	GO:0004420: hydroxymethylglutaryl-CoA reductase (NADPH) activity	1.20E-04
8	GO:0015194: L-serine transmembrane transporter activity	1.20E-04
9	GO:0042282: hydroxymethylglutaryl-CoA reductase activity	1.20E-04
10	GO:0000822: inositol hexakisphosphate binding	2.77E-04
11	GO:0015180: L-alanine transmembrane transporter activity	2.77E-04
12	GO:0016868: intramolecular transferase activity, phosphotransferases	2.77E-04
13	GO:0003839: gamma-glutamylcyclotransferase activity	2.77E-04
14	GO:0005094: Rho GDP-dissociation inhibitor activity	2.77E-04
15	GO:0016301: kinase activity	3.56E-04
16	GO:0005515: protein binding	4.17E-04
17	GO:0015193: L-proline transmembrane transporter activity	4.58E-04
18	GO:0016805: dipeptidase activity	4.58E-04
19	GO:0080054: low-affinity nitrate transmembrane transporter activity	4.58E-04
20	GO:0004180: carboxypeptidase activity	4.58E-04
21	GO:0019201: nucleotide kinase activity	6.57E-04
22	GO:0015175: neutral amino acid transmembrane transporter activity	6.57E-04
23	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	6.57E-04
24	GO:0015186: L-glutamine transmembrane transporter activity	6.57E-04
25	GO:0003878: ATP citrate synthase activity	6.57E-04
26	GO:0004871: signal transducer activity	7.68E-04
27	GO:0005313: L-glutamate transmembrane transporter activity	8.72E-04
28	GO:0070628: proteasome binding	8.72E-04
29	GO:0009044: xylan 1,4-beta-xylosidase activity	8.72E-04
30	GO:0008526: phosphatidylinositol transporter activity	8.72E-04
31	GO:0046556: alpha-L-arabinofuranosidase activity	8.72E-04
32	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	8.72E-04
33	GO:0004674: protein serine/threonine kinase activity	9.13E-04
34	GO:0004518: nuclease activity	1.04E-03
35	GO:0017137: Rab GTPase binding	1.10E-03
36	GO:0008725: DNA-3-methyladenine glycosylase activity	1.10E-03
37	GO:0005524: ATP binding	1.28E-03
38	GO:0042578: phosphoric ester hydrolase activity	1.35E-03
39	GO:0031593: polyubiquitin binding	1.35E-03
40	GO:0004017: adenylate kinase activity	1.61E-03
41	GO:0004712: protein serine/threonine/tyrosine kinase activity	2.48E-03
42	GO:0000989: transcription factor activity, transcription factor binding	2.82E-03
43	GO:0035091: phosphatidylinositol binding	3.16E-03
44	GO:0004805: trehalose-phosphatase activity	3.51E-03
45	GO:0004568: chitinase activity	3.51E-03
46	GO:0000976: transcription regulatory region sequence-specific DNA binding	4.26E-03
47	GO:0004565: beta-galactosidase activity	4.64E-03
48	GO:0010329: auxin efflux transmembrane transporter activity	4.64E-03
49	GO:0008081: phosphoric diester hydrolase activity	4.64E-03
50	GO:0008266: poly(U) RNA binding	5.04E-03
51	GO:0004190: aspartic-type endopeptidase activity	5.46E-03
52	GO:0005528: FK506 binding	6.32E-03
53	GO:0003714: transcription corepressor activity	6.32E-03
54	GO:0043130: ubiquitin binding	6.32E-03
55	GO:0015079: potassium ion transmembrane transporter activity	6.76E-03
56	GO:0004707: MAP kinase activity	7.22E-03
57	GO:0033612: receptor serine/threonine kinase binding	7.22E-03
58	GO:0019706: protein-cysteine S-palmitoyltransferase activity	7.22E-03
59	GO:0016829: lyase activity	7.55E-03
60	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	7.69E-03
61	GO:0008289: lipid binding	8.05E-03
62	GO:0047134: protein-disulfide reductase activity	9.17E-03
63	GO:0050662: coenzyme binding	1.07E-02
64	GO:0004791: thioredoxin-disulfide reductase activity	1.07E-02
65	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.30E-02
66	GO:0051015: actin filament binding	1.30E-02
67	GO:0003684: damaged DNA binding	1.36E-02
68	GO:0015250: water channel activity	1.54E-02
69	GO:0030247: polysaccharide binding	1.72E-02
70	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.72E-02
71	GO:0003993: acid phosphatase activity	2.26E-02
72	GO:0050661: NADP binding	2.41E-02
73	GO:0043621: protein self-association	2.78E-02
74	GO:0051537: 2 iron, 2 sulfur cluster binding	2.78E-02
75	GO:0015293: symporter activity	2.85E-02
76	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.93E-02
77	GO:0005215: transporter activity	3.03E-02
78	GO:0016298: lipase activity	3.33E-02
79	GO:0003777: microtubule motor activity	3.49E-02
80	GO:0015171: amino acid transmembrane transporter activity	3.49E-02
81	GO:0031625: ubiquitin protein ligase binding	3.49E-02
82	GO:0008234: cysteine-type peptidase activity	3.49E-02
83	GO:0004650: polygalacturonase activity	3.91E-02
84	GO:0080043: quercetin 3-O-glucosyltransferase activity	3.91E-02
85	GO:0080044: quercetin 7-O-glucosyltransferase activity	3.91E-02
86	GO:0015035: protein disulfide oxidoreductase activity	4.26E-02
87	GO:0004672: protein kinase activity	4.29E-02
88	GO:0003729: mRNA binding	4.36E-02
89	GO:0016758: transferase activity, transferring hexosyl groups	4.80E-02
90	GO:0019843: rRNA binding	4.89E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009930: longitudinal side of cell surface	0.00E+00
3	GO:0005886: plasma membrane	1.10E-07
4	GO:0009505: plant-type cell wall	1.93E-05
5	GO:0009897: external side of plasma membrane	4.58E-04
6	GO:0048188: Set1C/COMPASS complex	4.58E-04
7	GO:0016328: lateral plasma membrane	4.58E-04
8	GO:0032432: actin filament bundle	6.57E-04
9	GO:0009346: citrate lyase complex	6.57E-04
10	GO:0009531: secondary cell wall	6.57E-04
11	GO:0030660: Golgi-associated vesicle membrane	8.72E-04
12	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	8.72E-04
13	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	2.19E-03
14	GO:0005765: lysosomal membrane	3.88E-03
15	GO:0005884: actin filament	3.88E-03
16	GO:0009574: preprophase band	4.64E-03
17	GO:0005578: proteinaceous extracellular matrix	4.64E-03
18	GO:0030659: cytoplasmic vesicle membrane	5.04E-03
19	GO:0009570: chloroplast stroma	5.37E-03
20	GO:0005871: kinesin complex	9.17E-03
21	GO:0005770: late endosome	1.02E-02
22	GO:0005773: vacuole	1.02E-02
23	GO:0046658: anchored component of plasma membrane	1.28E-02
24	GO:0000151: ubiquitin ligase complex	1.85E-02
25	GO:0019005: SCF ubiquitin ligase complex	1.85E-02
26	GO:0005622: intracellular	2.27E-02
27	GO:0009506: plasmodesma	2.37E-02
28	GO:0010008: endosome membrane	3.74E-02
29	GO:0005834: heterotrimeric G-protein complex	3.83E-02
30	GO:0012505: endomembrane system	4.09E-02
31	GO:0005789: endoplasmic reticulum membrane	4.51E-02
32	GO:0048046: apoplast	4.61E-02
33	GO:0010287: plastoglobule	4.71E-02
34	GO:0009543: chloroplast thylakoid lumen	4.89E-02