GO Enrichment Analysis of Co-expressed Genes with
AT4G35450
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0045860: positive regulation of protein kinase activity | 0.00E+00 |
| 3 | GO:0046838: phosphorylated carbohydrate dephosphorylation | 0.00E+00 |
| 4 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 5 | GO:2000605: positive regulation of secondary growth | 0.00E+00 |
| 6 | GO:0045176: apical protein localization | 0.00E+00 |
| 7 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 8 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 9 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 10 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 11 | GO:1904526: regulation of microtubule binding | 0.00E+00 |
| 12 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 13 | GO:0005983: starch catabolic process | 1.72E-08 |
| 14 | GO:0009913: epidermal cell differentiation | 1.65E-05 |
| 15 | GO:0048825: cotyledon development | 2.58E-05 |
| 16 | GO:0010028: xanthophyll cycle | 8.25E-05 |
| 17 | GO:0000025: maltose catabolic process | 8.25E-05 |
| 18 | GO:0015808: L-alanine transport | 8.25E-05 |
| 19 | GO:0010480: microsporocyte differentiation | 8.25E-05 |
| 20 | GO:0031338: regulation of vesicle fusion | 8.25E-05 |
| 21 | GO:0016122: xanthophyll metabolic process | 1.97E-04 |
| 22 | GO:0015804: neutral amino acid transport | 1.97E-04 |
| 23 | GO:0051262: protein tetramerization | 1.97E-04 |
| 24 | GO:0055129: L-proline biosynthetic process | 1.97E-04 |
| 25 | GO:0098712: L-glutamate import across plasma membrane | 1.97E-04 |
| 26 | GO:0090630: activation of GTPase activity | 3.29E-04 |
| 27 | GO:0051639: actin filament network formation | 4.75E-04 |
| 28 | GO:0019252: starch biosynthetic process | 5.70E-04 |
| 29 | GO:0051764: actin crosslink formation | 6.32E-04 |
| 30 | GO:0015994: chlorophyll metabolic process | 6.32E-04 |
| 31 | GO:0006552: leucine catabolic process | 6.32E-04 |
| 32 | GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway | 6.32E-04 |
| 33 | GO:0010021: amylopectin biosynthetic process | 6.32E-04 |
| 34 | GO:1901657: glycosyl compound metabolic process | 6.90E-04 |
| 35 | GO:0048497: maintenance of floral organ identity | 8.00E-04 |
| 36 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 9.77E-04 |
| 37 | GO:0048827: phyllome development | 9.77E-04 |
| 38 | GO:0042549: photosystem II stabilization | 9.77E-04 |
| 39 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 9.77E-04 |
| 40 | GO:0006574: valine catabolic process | 9.77E-04 |
| 41 | GO:0006561: proline biosynthetic process | 9.77E-04 |
| 42 | GO:0045926: negative regulation of growth | 1.16E-03 |
| 43 | GO:0009082: branched-chain amino acid biosynthetic process | 1.16E-03 |
| 44 | GO:0009942: longitudinal axis specification | 1.16E-03 |
| 45 | GO:0043090: amino acid import | 1.36E-03 |
| 46 | GO:0048437: floral organ development | 1.36E-03 |
| 47 | GO:0005975: carbohydrate metabolic process | 1.40E-03 |
| 48 | GO:0000105: histidine biosynthetic process | 1.57E-03 |
| 49 | GO:0008610: lipid biosynthetic process | 1.57E-03 |
| 50 | GO:0070413: trehalose metabolism in response to stress | 1.57E-03 |
| 51 | GO:0071482: cellular response to light stimulus | 1.79E-03 |
| 52 | GO:0015996: chlorophyll catabolic process | 1.79E-03 |
| 53 | GO:0009827: plant-type cell wall modification | 1.79E-03 |
| 54 | GO:0046777: protein autophosphorylation | 1.87E-03 |
| 55 | GO:0048507: meristem development | 2.02E-03 |
| 56 | GO:0009638: phototropism | 2.26E-03 |
| 57 | GO:0006535: cysteine biosynthetic process from serine | 2.51E-03 |
| 58 | GO:0046856: phosphatidylinositol dephosphorylation | 2.77E-03 |
| 59 | GO:1903507: negative regulation of nucleic acid-templated transcription | 2.77E-03 |
| 60 | GO:0048229: gametophyte development | 2.77E-03 |
| 61 | GO:0010229: inflorescence development | 3.31E-03 |
| 62 | GO:0010075: regulation of meristem growth | 3.31E-03 |
| 63 | GO:0010102: lateral root morphogenesis | 3.31E-03 |
| 64 | GO:0009785: blue light signaling pathway | 3.31E-03 |
| 65 | GO:0006006: glucose metabolic process | 3.31E-03 |
| 66 | GO:0018105: peptidyl-serine phosphorylation | 3.50E-03 |
| 67 | GO:0010540: basipetal auxin transport | 3.59E-03 |
| 68 | GO:0009934: regulation of meristem structural organization | 3.59E-03 |
| 69 | GO:0005992: trehalose biosynthetic process | 4.48E-03 |
| 70 | GO:0019344: cysteine biosynthetic process | 4.48E-03 |
| 71 | GO:0007010: cytoskeleton organization | 4.48E-03 |
| 72 | GO:0051017: actin filament bundle assembly | 4.48E-03 |
| 73 | GO:0009845: seed germination | 4.59E-03 |
| 74 | GO:0008299: isoprenoid biosynthetic process | 4.80E-03 |
| 75 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 5.45E-03 |
| 76 | GO:0035556: intracellular signal transduction | 6.21E-03 |
| 77 | GO:0006470: protein dephosphorylation | 6.68E-03 |
| 78 | GO:0048653: anther development | 6.83E-03 |
| 79 | GO:0010051: xylem and phloem pattern formation | 6.83E-03 |
| 80 | GO:0045489: pectin biosynthetic process | 7.20E-03 |
| 81 | GO:0010305: leaf vascular tissue pattern formation | 7.20E-03 |
| 82 | GO:0006662: glycerol ether metabolic process | 7.20E-03 |
| 83 | GO:0007018: microtubule-based movement | 7.57E-03 |
| 84 | GO:0016126: sterol biosynthetic process | 1.08E-02 |
| 85 | GO:0009911: positive regulation of flower development | 1.08E-02 |
| 86 | GO:0010027: thylakoid membrane organization | 1.08E-02 |
| 87 | GO:0080167: response to karrikin | 1.12E-02 |
| 88 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.16E-02 |
| 89 | GO:0016310: phosphorylation | 1.23E-02 |
| 90 | GO:0030244: cellulose biosynthetic process | 1.30E-02 |
| 91 | GO:0009834: plant-type secondary cell wall biogenesis | 1.39E-02 |
| 92 | GO:0034599: cellular response to oxidative stress | 1.59E-02 |
| 93 | GO:0009733: response to auxin | 1.64E-02 |
| 94 | GO:0006839: mitochondrial transport | 1.69E-02 |
| 95 | GO:0006631: fatty acid metabolic process | 1.74E-02 |
| 96 | GO:0031347: regulation of defense response | 2.11E-02 |
| 97 | GO:0042538: hyperosmotic salinity response | 2.16E-02 |
| 98 | GO:0006364: rRNA processing | 2.28E-02 |
| 99 | GO:0009908: flower development | 2.67E-02 |
| 100 | GO:0009624: response to nematode | 2.93E-02 |
| 101 | GO:0009416: response to light stimulus | 2.95E-02 |
| 102 | GO:0009611: response to wounding | 3.02E-02 |
| 103 | GO:0009790: embryo development | 3.83E-02 |
| 104 | GO:0006633: fatty acid biosynthetic process | 4.04E-02 |
| 105 | GO:0007623: circadian rhythm | 4.32E-02 |
| 106 | GO:0010150: leaf senescence | 4.32E-02 |
| 107 | GO:0009739: response to gibberellin | 4.67E-02 |
| 108 | GO:0010468: regulation of gene expression | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 2 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 3 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 4 | GO:0051060: pullulanase activity | 0.00E+00 |
| 5 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 6 | GO:0004676: 3-phosphoinositide-dependent protein kinase activity | 0.00E+00 |
| 7 | GO:0004556: alpha-amylase activity | 1.65E-05 |
| 8 | GO:0005227: calcium activated cation channel activity | 8.25E-05 |
| 9 | GO:0015194: L-serine transmembrane transporter activity | 8.25E-05 |
| 10 | GO:0004349: glutamate 5-kinase activity | 8.25E-05 |
| 11 | GO:0050308: sugar-phosphatase activity | 8.25E-05 |
| 12 | GO:0004350: glutamate-5-semialdehyde dehydrogenase activity | 8.25E-05 |
| 13 | GO:0004856: xylulokinase activity | 8.25E-05 |
| 14 | GO:0004134: 4-alpha-glucanotransferase activity | 8.25E-05 |
| 15 | GO:0019203: carbohydrate phosphatase activity | 8.25E-05 |
| 16 | GO:0034256: chlorophyll(ide) b reductase activity | 8.25E-05 |
| 17 | GO:0004163: diphosphomevalonate decarboxylase activity | 8.25E-05 |
| 18 | GO:0003879: ATP phosphoribosyltransferase activity | 8.25E-05 |
| 19 | GO:0033201: alpha-1,4-glucan synthase activity | 1.97E-04 |
| 20 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 1.97E-04 |
| 21 | GO:0015180: L-alanine transmembrane transporter activity | 1.97E-04 |
| 22 | GO:0050017: L-3-cyanoalanine synthase activity | 1.97E-04 |
| 23 | GO:0070402: NADPH binding | 3.29E-04 |
| 24 | GO:0004373: glycogen (starch) synthase activity | 3.29E-04 |
| 25 | GO:0015193: L-proline transmembrane transporter activity | 3.29E-04 |
| 26 | GO:0052654: L-leucine transaminase activity | 4.75E-04 |
| 27 | GO:0052655: L-valine transaminase activity | 4.75E-04 |
| 28 | GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity | 4.75E-04 |
| 29 | GO:0015186: L-glutamine transmembrane transporter activity | 4.75E-04 |
| 30 | GO:0019201: nucleotide kinase activity | 4.75E-04 |
| 31 | GO:0015175: neutral amino acid transmembrane transporter activity | 4.75E-04 |
| 32 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 4.75E-04 |
| 33 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 4.75E-04 |
| 34 | GO:0052656: L-isoleucine transaminase activity | 4.75E-04 |
| 35 | GO:0005313: L-glutamate transmembrane transporter activity | 6.32E-04 |
| 36 | GO:0004084: branched-chain-amino-acid transaminase activity | 6.32E-04 |
| 37 | GO:0009011: starch synthase activity | 6.32E-04 |
| 38 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 8.00E-04 |
| 39 | GO:0017137: Rab GTPase binding | 8.00E-04 |
| 40 | GO:2001070: starch binding | 9.77E-04 |
| 41 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 9.77E-04 |
| 42 | GO:0102483: scopolin beta-glucosidase activity | 1.01E-03 |
| 43 | GO:0004124: cysteine synthase activity | 1.16E-03 |
| 44 | GO:0070300: phosphatidic acid binding | 1.16E-03 |
| 45 | GO:0005261: cation channel activity | 1.16E-03 |
| 46 | GO:0004017: adenylate kinase activity | 1.16E-03 |
| 47 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.16E-03 |
| 48 | GO:0008422: beta-glucosidase activity | 1.52E-03 |
| 49 | GO:0004033: aldo-keto reductase (NADP) activity | 1.57E-03 |
| 50 | GO:0043022: ribosome binding | 1.57E-03 |
| 51 | GO:0008138: protein tyrosine/serine/threonine phosphatase activity | 2.02E-03 |
| 52 | GO:0004805: trehalose-phosphatase activity | 2.51E-03 |
| 53 | GO:0003777: microtubule motor activity | 2.66E-03 |
| 54 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 3.03E-03 |
| 55 | GO:0004565: beta-galactosidase activity | 3.31E-03 |
| 56 | GO:0005528: FK506 binding | 4.48E-03 |
| 57 | GO:0003714: transcription corepressor activity | 4.48E-03 |
| 58 | GO:0016301: kinase activity | 4.95E-03 |
| 59 | GO:0004707: MAP kinase activity | 5.12E-03 |
| 60 | GO:0033612: receptor serine/threonine kinase binding | 5.12E-03 |
| 61 | GO:0005515: protein binding | 5.32E-03 |
| 62 | GO:0008017: microtubule binding | 6.12E-03 |
| 63 | GO:0047134: protein-disulfide reductase activity | 6.48E-03 |
| 64 | GO:0042802: identical protein binding | 7.43E-03 |
| 65 | GO:0004791: thioredoxin-disulfide reductase activity | 7.57E-03 |
| 66 | GO:0016853: isomerase activity | 7.57E-03 |
| 67 | GO:0004518: nuclease activity | 8.73E-03 |
| 68 | GO:0051015: actin filament binding | 9.12E-03 |
| 69 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 9.12E-03 |
| 70 | GO:0016413: O-acetyltransferase activity | 1.04E-02 |
| 71 | GO:0009931: calcium-dependent protein serine/threonine kinase activity | 1.17E-02 |
| 72 | GO:0004683: calmodulin-dependent protein kinase activity | 1.21E-02 |
| 73 | GO:0004721: phosphoprotein phosphatase activity | 1.21E-02 |
| 74 | GO:0005096: GTPase activator activity | 1.35E-02 |
| 75 | GO:0004871: signal transducer activity | 1.41E-02 |
| 76 | GO:0030145: manganese ion binding | 1.44E-02 |
| 77 | GO:0035091: phosphatidylinositol binding | 1.95E-02 |
| 78 | GO:0015293: symporter activity | 2.00E-02 |
| 79 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.05E-02 |
| 80 | GO:0005524: ATP binding | 2.15E-02 |
| 81 | GO:0008289: lipid binding | 2.32E-02 |
| 82 | GO:0015171: amino acid transmembrane transporter activity | 2.45E-02 |
| 83 | GO:0003779: actin binding | 2.86E-02 |
| 84 | GO:0015035: protein disulfide oxidoreductase activity | 2.99E-02 |
| 85 | GO:0004674: protein serine/threonine kinase activity | 3.45E-02 |
| 86 | GO:0016787: hydrolase activity | 3.69E-02 |
| 87 | GO:0030170: pyridoxal phosphate binding | 3.70E-02 |
| 88 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 8.06E-08 |
| 2 | GO:0009570: chloroplast stroma | 4.28E-06 |
| 3 | GO:0009501: amyloplast | 4.22E-05 |
| 4 | GO:0032432: actin filament bundle | 4.75E-04 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 6.93E-04 |
| 6 | GO:0005884: actin filament | 2.77E-03 |
| 7 | GO:0009508: plastid chromosome | 3.31E-03 |
| 8 | GO:0030095: chloroplast photosystem II | 3.59E-03 |
| 9 | GO:0009543: chloroplast thylakoid lumen | 4.25E-03 |
| 10 | GO:0005871: kinesin complex | 6.48E-03 |
| 11 | GO:0005770: late endosome | 7.20E-03 |
| 12 | GO:0009534: chloroplast thylakoid | 7.36E-03 |
| 13 | GO:0009295: nucleoid | 9.94E-03 |
| 14 | GO:0005874: microtubule | 1.09E-02 |
| 15 | GO:0031977: thylakoid lumen | 1.74E-02 |
| 16 | GO:0012505: endomembrane system | 2.86E-02 |
| 17 | GO:0005886: plasma membrane | 2.96E-02 |
| 18 | GO:0010287: plastoglobule | 3.30E-02 |