Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G34460

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0036258: multivesicular body assembly0.00E+00
2GO:0006481: C-terminal protein methylation1.14E-04
3GO:1902265: abscisic acid homeostasis1.14E-04
4GO:0034214: protein hexamerization1.14E-04
5GO:0010265: SCF complex assembly1.14E-04
6GO:0010201: response to continuous far red light stimulus by the high-irradiance response system1.14E-04
7GO:0046167: glycerol-3-phosphate biosynthetic process1.14E-04
8GO:0000303: response to superoxide1.14E-04
9GO:0006468: protein phosphorylation2.33E-04
10GO:0019374: galactolipid metabolic process2.65E-04
11GO:0030010: establishment of cell polarity2.65E-04
12GO:0046740: transport of virus in host, cell to cell2.65E-04
13GO:0006641: triglyceride metabolic process2.65E-04
14GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway4.38E-04
15GO:0006556: S-adenosylmethionine biosynthetic process4.38E-04
16GO:0019563: glycerol catabolic process4.38E-04
17GO:0010359: regulation of anion channel activity4.38E-04
18GO:0046777: protein autophosphorylation5.43E-04
19GO:0009306: protein secretion5.99E-04
20GO:0006072: glycerol-3-phosphate metabolic process6.29E-04
21GO:0006809: nitric oxide biosynthetic process6.29E-04
22GO:0009399: nitrogen fixation6.29E-04
23GO:0070676: intralumenal vesicle formation6.29E-04
24GO:0010071: root meristem specification6.29E-04
25GO:0070301: cellular response to hydrogen peroxide6.29E-04
26GO:0042631: cellular response to water deprivation6.98E-04
27GO:0042991: transcription factor import into nucleus8.35E-04
28GO:0010188: response to microbial phytotoxin8.35E-04
29GO:0006878: cellular copper ion homeostasis8.35E-04
30GO:0006542: glutamine biosynthetic process8.35E-04
31GO:0009687: abscisic acid metabolic process8.35E-04
32GO:0006904: vesicle docking involved in exocytosis1.17E-03
33GO:0019243: methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione1.29E-03
34GO:1902456: regulation of stomatal opening1.29E-03
35GO:1900425: negative regulation of defense response to bacterium1.29E-03
36GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly1.29E-03
37GO:0070814: hydrogen sulfide biosynthetic process1.29E-03
38GO:0048317: seed morphogenesis1.29E-03
39GO:0006950: response to stress1.53E-03
40GO:0000911: cytokinesis by cell plate formation1.54E-03
41GO:0080060: integument development1.54E-03
42GO:0006470: protein dephosphorylation1.54E-03
43GO:0010555: response to mannitol1.54E-03
44GO:2000067: regulation of root morphogenesis1.54E-03
45GO:0071669: plant-type cell wall organization or biogenesis1.81E-03
46GO:0015937: coenzyme A biosynthetic process1.81E-03
47GO:0009610: response to symbiotic fungus1.81E-03
48GO:0045995: regulation of embryonic development1.81E-03
49GO:0006955: immune response1.81E-03
50GO:0009819: drought recovery2.09E-03
51GO:0010078: maintenance of root meristem identity2.09E-03
52GO:0010492: maintenance of shoot apical meristem identity2.09E-03
53GO:0016559: peroxisome fission2.09E-03
54GO:0006644: phospholipid metabolic process2.09E-03
55GO:0009867: jasmonic acid mediated signaling pathway2.13E-03
56GO:0009880: embryonic pattern specification2.39E-03
57GO:0007186: G-protein coupled receptor signaling pathway2.39E-03
58GO:0090333: regulation of stomatal closure2.70E-03
59GO:0046685: response to arsenic-containing substance2.70E-03
60GO:0048366: leaf development2.77E-03
61GO:0048268: clathrin coat assembly3.02E-03
62GO:0042761: very long-chain fatty acid biosynthetic process3.02E-03
63GO:0019538: protein metabolic process3.36E-03
64GO:0000103: sulfate assimilation3.36E-03
65GO:0010629: negative regulation of gene expression3.36E-03
66GO:0009736: cytokinin-activated signaling pathway3.68E-03
67GO:0010072: primary shoot apical meristem specification3.71E-03
68GO:0009750: response to fructose3.71E-03
69GO:0030148: sphingolipid biosynthetic process3.71E-03
70GO:0051603: proteolysis involved in cellular protein catabolic process3.80E-03
71GO:0000266: mitochondrial fission4.06E-03
72GO:0012501: programmed cell death4.06E-03
73GO:0010102: lateral root morphogenesis4.43E-03
74GO:0002237: response to molecule of bacterial origin4.81E-03
75GO:0007034: vacuolar transport4.81E-03
76GO:0042343: indole glucosinolate metabolic process5.21E-03
77GO:0009825: multidimensional cell growth5.21E-03
78GO:0010030: positive regulation of seed germination5.21E-03
79GO:0046854: phosphatidylinositol phosphorylation5.21E-03
80GO:0010053: root epidermal cell differentiation5.21E-03
81GO:2000377: regulation of reactive oxygen species metabolic process6.03E-03
82GO:0042742: defense response to bacterium6.11E-03
83GO:0016575: histone deacetylation6.45E-03
84GO:0009873: ethylene-activated signaling pathway6.71E-03
85GO:0098542: defense response to other organism6.89E-03
86GO:0061077: chaperone-mediated protein folding6.89E-03
87GO:0006730: one-carbon metabolic process7.34E-03
88GO:0030433: ubiquitin-dependent ERAD pathway7.34E-03
89GO:0031348: negative regulation of defense response7.34E-03
90GO:0080092: regulation of pollen tube growth7.34E-03
91GO:0009790: embryo development7.61E-03
92GO:0009693: ethylene biosynthetic process7.79E-03
93GO:0071215: cellular response to abscisic acid stimulus7.79E-03
94GO:0040008: regulation of growth8.60E-03
95GO:0042147: retrograde transport, endosome to Golgi8.74E-03
96GO:0015031: protein transport8.79E-03
97GO:0000271: polysaccharide biosynthetic process9.23E-03
98GO:0080022: primary root development9.23E-03
99GO:0010087: phloem or xylem histogenesis9.23E-03
100GO:0071472: cellular response to salt stress9.73E-03
101GO:0010197: polar nucleus fusion9.73E-03
102GO:0016567: protein ubiquitination1.01E-02
103GO:0042752: regulation of circadian rhythm1.02E-02
104GO:0007166: cell surface receptor signaling pathway1.03E-02
105GO:0010183: pollen tube guidance1.08E-02
106GO:0035556: intracellular signal transduction1.08E-02
107GO:0048825: cotyledon development1.08E-02
108GO:0009749: response to glucose1.08E-02
109GO:0009617: response to bacterium1.08E-02
110GO:0055072: iron ion homeostasis1.08E-02
111GO:0010468: regulation of gene expression1.08E-02
112GO:0071554: cell wall organization or biogenesis1.13E-02
113GO:0002229: defense response to oomycetes1.13E-02
114GO:0010193: response to ozone1.13E-02
115GO:0006891: intra-Golgi vesicle-mediated transport1.13E-02
116GO:0016032: viral process1.18E-02
117GO:0046686: response to cadmium ion1.19E-02
118GO:0071281: cellular response to iron ion1.24E-02
119GO:0006464: cellular protein modification process1.29E-02
120GO:0071805: potassium ion transmembrane transport1.35E-02
121GO:0000910: cytokinesis1.40E-02
122GO:0006511: ubiquitin-dependent protein catabolic process1.48E-02
123GO:0006970: response to osmotic stress1.51E-02
124GO:0009816: defense response to bacterium, incompatible interaction1.52E-02
125GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.52E-02
126GO:0007049: cell cycle1.56E-02
127GO:0042128: nitrate assimilation1.58E-02
128GO:0009723: response to ethylene1.62E-02
129GO:0048573: photoperiodism, flowering1.64E-02
130GO:0030244: cellulose biosynthetic process1.77E-02
131GO:0010200: response to chitin1.79E-02
132GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.79E-02
133GO:0009832: plant-type cell wall biogenesis1.83E-02
134GO:0048767: root hair elongation1.83E-02
135GO:0006499: N-terminal protein myristoylation1.89E-02
136GO:0048527: lateral root development1.96E-02
137GO:0010119: regulation of stomatal movement1.96E-02
138GO:0007568: aging1.96E-02
139GO:0006631: fatty acid metabolic process2.36E-02
140GO:0006897: endocytosis2.36E-02
141GO:0006979: response to oxidative stress2.48E-02
142GO:0016042: lipid catabolic process2.49E-02
143GO:0009744: response to sucrose2.50E-02
144GO:0051707: response to other organism2.50E-02
145GO:0009753: response to jasmonic acid2.75E-02
146GO:0031347: regulation of defense response2.87E-02
147GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.87E-02
148GO:0006813: potassium ion transport3.09E-02
149GO:0048367: shoot system development3.57E-02
150GO:0009734: auxin-activated signaling pathway3.61E-02
151GO:0018105: peptidyl-serine phosphorylation4.06E-02
152GO:0009738: abscisic acid-activated signaling pathway4.38E-02
153GO:0006351: transcription, DNA-templated4.92E-02
154GO:0009845: seed germination4.93E-02
RankGO TermAdjusted P value
1GO:0033550: MAP kinase tyrosine phosphatase activity0.00E+00
2GO:0004370: glycerol kinase activity0.00E+00
3GO:0005524: ATP binding7.51E-08
4GO:0005515: protein binding3.84E-06
5GO:0004674: protein serine/threonine kinase activity5.02E-05
6GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity1.14E-04
7GO:0004713: protein tyrosine kinase activity1.55E-04
8GO:0045140: inositol phosphoceramide synthase activity2.65E-04
9GO:0019200: carbohydrate kinase activity2.65E-04
10GO:0004594: pantothenate kinase activity2.65E-04
11GO:0031683: G-protein beta/gamma-subunit complex binding4.38E-04
12GO:0004781: sulfate adenylyltransferase (ATP) activity4.38E-04
13GO:0004478: methionine adenosyltransferase activity4.38E-04
14GO:0001664: G-protein coupled receptor binding4.38E-04
15GO:0000285: 1-phosphatidylinositol-3-phosphate 5-kinase activity6.29E-04
16GO:0004416: hydroxyacylglutathione hydrolase activity6.29E-04
17GO:0004301: epoxide hydrolase activity8.35E-04
18GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.05E-03
19GO:0004356: glutamate-ammonia ligase activity1.05E-03
20GO:0010294: abscisic acid glucosyltransferase activity1.05E-03
21GO:0008565: protein transporter activity1.09E-03
22GO:0031593: polyubiquitin binding1.29E-03
23GO:0047714: galactolipase activity1.29E-03
24GO:0036402: proteasome-activating ATPase activity1.29E-03
25GO:0102391: decanoate--CoA ligase activity1.54E-03
26GO:0003950: NAD+ ADP-ribosyltransferase activity1.54E-03
27GO:0051753: mannan synthase activity1.54E-03
28GO:0008113: peptide-methionine (S)-S-oxide reductase activity1.54E-03
29GO:0004620: phospholipase activity1.81E-03
30GO:0004467: long-chain fatty acid-CoA ligase activity1.81E-03
31GO:0004869: cysteine-type endopeptidase inhibitor activity2.09E-03
32GO:0016301: kinase activity2.12E-03
33GO:0046982: protein heterodimerization activity2.20E-03
34GO:0004712: protein serine/threonine/tyrosine kinase activity2.32E-03
35GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific)2.39E-03
36GO:0008970: phosphatidylcholine 1-acylhydrolase activity2.39E-03
37GO:0045309: protein phosphorylated amino acid binding3.02E-03
38GO:0047617: acyl-CoA hydrolase activity3.02E-03
39GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity3.36E-03
40GO:0005545: 1-phosphatidylinositol binding3.36E-03
41GO:0019904: protein domain specific binding3.71E-03
42GO:0042803: protein homodimerization activity3.95E-03
43GO:0004722: protein serine/threonine phosphatase activity4.18E-03
44GO:0017025: TBP-class protein binding5.21E-03
45GO:0004725: protein tyrosine phosphatase activity5.61E-03
46GO:0004407: histone deacetylase activity6.03E-03
47GO:0043130: ubiquitin binding6.03E-03
48GO:0005528: FK506 binding6.03E-03
49GO:0015079: potassium ion transmembrane transporter activity6.45E-03
50GO:0043424: protein histidine kinase binding6.45E-03
51GO:0004298: threonine-type endopeptidase activity6.89E-03
52GO:0016760: cellulose synthase (UDP-forming) activity7.79E-03
53GO:0016887: ATPase activity8.46E-03
54GO:0047134: protein-disulfide reductase activity8.74E-03
55GO:0030276: clathrin binding9.73E-03
56GO:0004791: thioredoxin-disulfide reductase activity1.02E-02
57GO:0004197: cysteine-type endopeptidase activity1.18E-02
58GO:0016759: cellulose synthase activity1.29E-02
59GO:0016413: O-acetyltransferase activity1.40E-02
60GO:0030246: carbohydrate binding1.47E-02
61GO:0009931: calcium-dependent protein serine/threonine kinase activity1.58E-02
62GO:0004806: triglyceride lipase activity1.64E-02
63GO:0030247: polysaccharide binding1.64E-02
64GO:0004683: calmodulin-dependent protein kinase activity1.64E-02
65GO:0005516: calmodulin binding1.69E-02
66GO:0016787: hydrolase activity1.93E-02
67GO:0004871: signal transducer activity2.18E-02
68GO:0003924: GTPase activity2.56E-02
69GO:0035091: phosphatidylinositol binding2.65E-02
70GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.79E-02
71GO:0031625: ubiquitin protein ligase binding3.33E-02
72GO:0008234: cysteine-type peptidase activity3.33E-02
73GO:0004842: ubiquitin-protein transferase activity3.67E-02
74GO:0080043: quercetin 3-O-glucosyltransferase activity3.73E-02
75GO:0080044: quercetin 7-O-glucosyltransferase activity3.73E-02
76GO:0016757: transferase activity, transferring glycosyl groups3.80E-02
77GO:0004672: protein kinase activity3.95E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane2.14E-06
2GO:0005829: cytosol8.06E-05
3GO:0030139: endocytic vesicle4.38E-04
4GO:0031461: cullin-RING ubiquitin ligase complex6.29E-04
5GO:0030136: clathrin-coated vesicle6.47E-04
6GO:0000813: ESCRT I complex1.05E-03
7GO:0000164: protein phosphatase type 1 complex1.05E-03
8GO:0016363: nuclear matrix1.54E-03
9GO:0031597: cytosolic proteasome complex1.54E-03
10GO:0030173: integral component of Golgi membrane1.54E-03
11GO:0000794: condensed nuclear chromosome1.81E-03
12GO:0031595: nuclear proteasome complex1.81E-03
13GO:0031902: late endosome membrane2.52E-03
14GO:0008540: proteasome regulatory particle, base subcomplex3.02E-03
15GO:0000502: proteasome complex3.68E-03
16GO:0016602: CCAAT-binding factor complex4.43E-03
17GO:0005764: lysosome4.81E-03
18GO:0005795: Golgi stack5.21E-03
19GO:0009524: phragmoplast6.88E-03
20GO:0005741: mitochondrial outer membrane6.89E-03
21GO:0005905: clathrin-coated pit6.89E-03
22GO:0005839: proteasome core complex6.89E-03
23GO:0019898: extrinsic component of membrane1.08E-02
24GO:0005789: endoplasmic reticulum membrane1.16E-02
25GO:0005778: peroxisomal membrane1.35E-02
26GO:0000151: ubiquitin ligase complex1.77E-02
27GO:0000786: nucleosome2.02E-02
28GO:0005819: spindle2.22E-02
29GO:0005856: cytoskeleton2.72E-02
30GO:0016021: integral component of membrane2.77E-02
31GO:0005635: nuclear envelope3.25E-02
32GO:0010008: endosome membrane3.57E-02
33GO:0005834: heterotrimeric G-protein complex3.65E-02
34GO:0005783: endoplasmic reticulum4.12E-02
35GO:0005623: cell4.75E-02
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Gene type



Gene DE type