co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G34120

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006983: ER overload response	0.00E+00
2	GO:0006069: ethanol oxidation	0.00E+00
3	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
4	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
5	GO:0032780: negative regulation of ATPase activity	0.00E+00
6	GO:0046292: formaldehyde metabolic process	0.00E+00
7	GO:0051788: response to misfolded protein	4.16E-07
8	GO:0006099: tricarboxylic acid cycle	5.54E-06
9	GO:0043248: proteasome assembly	1.83E-05
10	GO:0006102: isocitrate metabolic process	4.65E-05
11	GO:0048455: stamen formation	8.78E-05
12	GO:0006772: thiamine metabolic process	8.78E-05
13	GO:0035266: meristem growth	8.78E-05
14	GO:0007292: female gamete generation	8.78E-05
15	GO:0006805: xenobiotic metabolic process	8.78E-05
16	GO:0080173: male-female gamete recognition during double fertilization	8.78E-05
17	GO:0006631: fatty acid metabolic process	1.59E-04
18	GO:0080026: response to indolebutyric acid	2.08E-04
19	GO:0006101: citrate metabolic process	2.08E-04
20	GO:0043066: negative regulation of apoptotic process	2.08E-04
21	GO:0097054: L-glutamate biosynthetic process	2.08E-04
22	GO:0051262: protein tetramerization	2.08E-04
23	GO:0019521: D-gluconate metabolic process	2.08E-04
24	GO:0090351: seedling development	2.16E-04
25	GO:0051603: proteolysis involved in cellular protein catabolic process	2.82E-04
26	GO:1900055: regulation of leaf senescence	3.48E-04
27	GO:0010359: regulation of anion channel activity	3.48E-04
28	GO:0080055: low-affinity nitrate transport	3.48E-04
29	GO:0060968: regulation of gene silencing	3.48E-04
30	GO:0046686: response to cadmium ion	3.94E-04
31	GO:0009651: response to salt stress	4.89E-04
32	GO:0006537: glutamate biosynthetic process	5.01E-04
33	GO:0071786: endoplasmic reticulum tubular network organization	5.01E-04
34	GO:0080024: indolebutyric acid metabolic process	5.01E-04
35	GO:0001676: long-chain fatty acid metabolic process	5.01E-04
36	GO:2001289: lipid X metabolic process	5.01E-04
37	GO:0072334: UDP-galactose transmembrane transport	5.01E-04
38	GO:0010188: response to microbial phytotoxin	6.66E-04
39	GO:0019676: ammonia assimilation cycle	6.66E-04
40	GO:1902584: positive regulation of response to water deprivation	6.66E-04
41	GO:0010363: regulation of plant-type hypersensitive response	6.66E-04
42	GO:0033356: UDP-L-arabinose metabolic process	6.66E-04
43	GO:0006564: L-serine biosynthetic process	8.44E-04
44	GO:0005513: detection of calcium ion	8.44E-04
45	GO:0006097: glyoxylate cycle	8.44E-04
46	GO:0009229: thiamine diphosphate biosynthetic process	8.44E-04
47	GO:0000380: alternative mRNA splicing, via spliceosome	8.44E-04
48	GO:0045927: positive regulation of growth	8.44E-04
49	GO:0010150: leaf senescence	8.48E-04
50	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	9.73E-04
51	GO:1902456: regulation of stomatal opening	1.03E-03
52	GO:1900425: negative regulation of defense response to bacterium	1.03E-03
53	GO:0006014: D-ribose metabolic process	1.03E-03
54	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	1.03E-03
55	GO:0006751: glutathione catabolic process	1.03E-03
56	GO:0048827: phyllome development	1.03E-03
57	GO:0006388: tRNA splicing, via endonucleolytic cleavage and ligation	1.03E-03
58	GO:0048232: male gamete generation	1.03E-03
59	GO:0010358: leaf shaping	1.03E-03
60	GO:0009267: cellular response to starvation	1.03E-03
61	GO:0009612: response to mechanical stimulus	1.23E-03
62	GO:0098655: cation transmembrane transport	1.23E-03
63	GO:0015977: carbon fixation	1.23E-03
64	GO:0034389: lipid particle organization	1.23E-03
65	GO:0048767: root hair elongation	1.26E-03
66	GO:0010119: regulation of stomatal movement	1.39E-03
67	GO:0010043: response to zinc ion	1.39E-03
68	GO:0007568: aging	1.39E-03
69	GO:0050790: regulation of catalytic activity	1.44E-03
70	GO:0006955: immune response	1.44E-03
71	GO:0046470: phosphatidylcholine metabolic process	1.44E-03
72	GO:0048528: post-embryonic root development	1.44E-03
73	GO:0043090: amino acid import	1.44E-03
74	GO:0080186: developmental vegetative growth	1.44E-03
75	GO:0045087: innate immune response	1.52E-03
76	GO:1900150: regulation of defense response to fungus	1.66E-03
77	GO:0006605: protein targeting	1.66E-03
78	GO:0010078: maintenance of root meristem identity	1.66E-03
79	GO:0016559: peroxisome fission	1.66E-03
80	GO:0006002: fructose 6-phosphate metabolic process	1.89E-03
81	GO:0009821: alkaloid biosynthetic process	2.14E-03
82	GO:0006098: pentose-phosphate shunt	2.14E-03
83	GO:0071577: zinc II ion transmembrane transport	2.39E-03
84	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.39E-03
85	GO:0043069: negative regulation of programmed cell death	2.65E-03
86	GO:0048829: root cap development	2.65E-03
87	GO:0010015: root morphogenesis	2.93E-03
88	GO:0000038: very long-chain fatty acid metabolic process	2.93E-03
89	GO:0009737: response to abscisic acid	2.94E-03
90	GO:0006096: glycolytic process	3.07E-03
91	GO:0009408: response to heat	3.11E-03
92	GO:0015706: nitrate transport	3.21E-03
93	GO:0000266: mitochondrial fission	3.21E-03
94	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	3.50E-03
95	GO:0009933: meristem structural organization	3.80E-03
96	GO:0055114: oxidation-reduction process	4.05E-03
97	GO:0010053: root epidermal cell differentiation	4.10E-03
98	GO:0034976: response to endoplasmic reticulum stress	4.42E-03
99	GO:2000377: regulation of reactive oxygen species metabolic process	4.74E-03
100	GO:0006487: protein N-linked glycosylation	4.74E-03
101	GO:0030433: ubiquitin-dependent ERAD pathway	5.76E-03
102	GO:0007005: mitochondrion organization	5.76E-03
103	GO:0009738: abscisic acid-activated signaling pathway	6.17E-03
104	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	6.86E-03
105	GO:0006662: glycerol ether metabolic process	7.62E-03
106	GO:0019252: starch biosynthetic process	8.42E-03
107	GO:0010193: response to ozone	8.83E-03
108	GO:0006635: fatty acid beta-oxidation	8.83E-03
109	GO:0006511: ubiquitin-dependent protein catabolic process	9.50E-03
110	GO:0030163: protein catabolic process	9.67E-03
111	GO:0010286: heat acclimation	1.05E-02
112	GO:0009723: response to ethylene	1.14E-02
113	GO:0009615: response to virus	1.14E-02
114	GO:0048366: leaf development	1.16E-02
115	GO:0010029: regulation of seed germination	1.19E-02
116	GO:0006974: cellular response to DNA damage stimulus	1.24E-02
117	GO:0042128: nitrate assimilation	1.24E-02
118	GO:0030244: cellulose biosynthetic process	1.38E-02
119	GO:0008219: cell death	1.38E-02
120	GO:0010311: lateral root formation	1.43E-02
121	GO:0009832: plant-type cell wall biogenesis	1.43E-02
122	GO:0045454: cell redox homeostasis	1.46E-02
123	GO:0006499: N-terminal protein myristoylation	1.48E-02
124	GO:0006865: amino acid transport	1.58E-02
125	GO:0006979: response to oxidative stress	1.59E-02
126	GO:0034599: cellular response to oxidative stress	1.68E-02
127	GO:0006508: proteolysis	1.95E-02
128	GO:0009744: response to sucrose	1.95E-02
129	GO:0000209: protein polyubiquitination	2.01E-02
130	GO:0009636: response to toxic substance	2.12E-02
131	GO:0009965: leaf morphogenesis	2.12E-02
132	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.24E-02
133	GO:0006812: cation transport	2.29E-02
134	GO:0009809: lignin biosynthetic process	2.41E-02
135	GO:0006857: oligopeptide transport	2.53E-02
136	GO:0048316: seed development	2.78E-02
137	GO:0048367: shoot system development	2.78E-02
138	GO:0009626: plant-type hypersensitive response	2.84E-02
139	GO:0009620: response to fungus	2.91E-02
140	GO:0009735: response to cytokinin	2.93E-02
141	GO:0018105: peptidyl-serine phosphorylation	3.17E-02
142	GO:0009555: pollen development	3.21E-02
143	GO:0009058: biosynthetic process	3.78E-02
144	GO:0009845: seed germination	3.85E-02
145	GO:0016036: cellular response to phosphate starvation	4.35E-02

Rank	GO Term	Adjusted P value
1	GO:0015930: glutamate synthase activity	0.00E+00
2	GO:0042030: ATPase inhibitor activity	0.00E+00
3	GO:0016504: peptidase activator activity	0.00E+00
4	GO:0080007: S-nitrosoglutathione reductase activity	0.00E+00
5	GO:0070577: lysine-acetylated histone binding	0.00E+00
6	GO:0051903: S-(hydroxymethyl)glutathione dehydrogenase activity	0.00E+00
7	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	8.78E-05
8	GO:0004788: thiamine diphosphokinase activity	8.78E-05
9	GO:0019707: protein-cysteine S-acyltransferase activity	8.78E-05
10	GO:0016041: glutamate synthase (ferredoxin) activity	8.78E-05
11	GO:0004112: cyclic-nucleotide phosphodiesterase activity	8.78E-05
12	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	8.78E-05
13	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.68E-04
14	GO:0004776: succinate-CoA ligase (GDP-forming) activity	2.08E-04
15	GO:0004617: phosphoglycerate dehydrogenase activity	2.08E-04
16	GO:0003994: aconitate hydratase activity	2.08E-04
17	GO:0004775: succinate-CoA ligase (ADP-forming) activity	2.08E-04
18	GO:0004557: alpha-galactosidase activity	3.48E-04
19	GO:0008964: phosphoenolpyruvate carboxylase activity	3.48E-04
20	GO:0003840: gamma-glutamyltransferase activity	3.48E-04
21	GO:0036374: glutathione hydrolase activity	3.48E-04
22	GO:0016805: dipeptidase activity	3.48E-04
23	GO:0052692: raffinose alpha-galactosidase activity	3.48E-04
24	GO:0080054: low-affinity nitrate transmembrane transporter activity	3.48E-04
25	GO:0008430: selenium binding	3.48E-04
26	GO:0004449: isocitrate dehydrogenase (NAD+) activity	5.01E-04
27	GO:0004300: enoyl-CoA hydratase activity	5.01E-04
28	GO:0001653: peptide receptor activity	5.01E-04
29	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	5.01E-04
30	GO:0070628: proteasome binding	6.66E-04
31	GO:0005509: calcium ion binding	6.81E-04
32	GO:0004197: cysteine-type endopeptidase activity	7.02E-04
33	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	8.44E-04
34	GO:0005496: steroid binding	8.44E-04
35	GO:0051538: 3 iron, 4 sulfur cluster binding	8.44E-04
36	GO:0005459: UDP-galactose transmembrane transporter activity	8.44E-04
37	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	8.44E-04
38	GO:0031593: polyubiquitin binding	1.03E-03
39	GO:0036402: proteasome-activating ATPase activity	1.03E-03
40	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	1.23E-03
41	GO:0102391: decanoate--CoA ligase activity	1.23E-03
42	GO:0004747: ribokinase activity	1.23E-03
43	GO:0016491: oxidoreductase activity	1.26E-03
44	GO:0000287: magnesium ion binding	1.42E-03
45	GO:0004620: phospholipase activity	1.44E-03
46	GO:0004467: long-chain fatty acid-CoA ligase activity	1.44E-03
47	GO:0008235: metalloexopeptidase activity	1.44E-03
48	GO:0003872: 6-phosphofructokinase activity	1.44E-03
49	GO:0008865: fructokinase activity	1.66E-03
50	GO:0052747: sinapyl alcohol dehydrogenase activity	1.66E-03
51	GO:0004630: phospholipase D activity	1.89E-03
52	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	1.89E-03
53	GO:0015293: symporter activity	2.18E-03
54	GO:0030955: potassium ion binding	2.39E-03
55	GO:0016844: strictosidine synthase activity	2.39E-03
56	GO:0004743: pyruvate kinase activity	2.39E-03
57	GO:0008234: cysteine-type peptidase activity	2.88E-03
58	GO:0004177: aminopeptidase activity	2.93E-03
59	GO:0045551: cinnamyl-alcohol dehydrogenase activity	3.21E-03
60	GO:0004022: alcohol dehydrogenase (NAD) activity	3.50E-03
61	GO:0008131: primary amine oxidase activity	3.80E-03
62	GO:0031624: ubiquitin conjugating enzyme binding	3.80E-03
63	GO:0017025: TBP-class protein binding	4.10E-03
64	GO:0005385: zinc ion transmembrane transporter activity	4.74E-03
65	GO:0008324: cation transmembrane transporter activity	5.07E-03
66	GO:0004298: threonine-type endopeptidase activity	5.42E-03
67	GO:0019706: protein-cysteine S-palmitoyltransferase activity	5.42E-03
68	GO:0003756: protein disulfide isomerase activity	6.48E-03
69	GO:0047134: protein-disulfide reductase activity	6.86E-03
70	GO:0005515: protein binding	7.14E-03
71	GO:0046873: metal ion transmembrane transporter activity	7.62E-03
72	GO:0004791: thioredoxin-disulfide reductase activity	8.02E-03
73	GO:0016853: isomerase activity	8.02E-03
74	GO:0048038: quinone binding	8.83E-03
75	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	9.67E-03
76	GO:0005507: copper ion binding	1.01E-02
77	GO:0016597: amino acid binding	1.10E-02
78	GO:0051213: dioxygenase activity	1.14E-02
79	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.24E-02
80	GO:0004683: calmodulin-dependent protein kinase activity	1.28E-02
81	GO:0061630: ubiquitin protein ligase activity	1.28E-02
82	GO:0005524: ATP binding	1.30E-02
83	GO:0005096: GTPase activator activity	1.43E-02
84	GO:0030145: manganese ion binding	1.53E-02
85	GO:0051539: 4 iron, 4 sulfur cluster binding	1.79E-02
86	GO:0004364: glutathione transferase activity	1.90E-02
87	GO:0005198: structural molecule activity	2.12E-02
88	GO:0051287: NAD binding	2.24E-02
89	GO:0015171: amino acid transmembrane transporter activity	2.60E-02
90	GO:0016887: ATPase activity	2.80E-02
91	GO:0015035: protein disulfide oxidoreductase activity	3.17E-02
92	GO:0005516: calmodulin binding	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0019822: P4 peroxisome	0.00E+00
2	GO:0005829: cytosol	1.37E-08
3	GO:0005777: peroxisome	2.18E-07
4	GO:0005773: vacuole	2.41E-06
5	GO:0005783: endoplasmic reticulum	8.41E-06
6	GO:0000138: Golgi trans cisterna	8.78E-05
7	GO:0008540: proteasome regulatory particle, base subcomplex	8.90E-05
8	GO:0005764: lysosome	1.91E-04
9	GO:0000502: proteasome complex	2.69E-04
10	GO:0005839: proteasome core complex	3.29E-04
11	GO:0046861: glyoxysomal membrane	3.48E-04
12	GO:0071782: endoplasmic reticulum tubular network	5.01E-04
13	GO:0005886: plasma membrane	7.68E-04
14	GO:0005778: peroxisomal membrane	8.40E-04
15	GO:0008250: oligosaccharyltransferase complex	8.44E-04
16	GO:0005945: 6-phosphofructokinase complex	8.44E-04
17	GO:0031597: cytosolic proteasome complex	1.23E-03
18	GO:0030173: integral component of Golgi membrane	1.23E-03
19	GO:0005737: cytoplasm	1.27E-03
20	GO:0031595: nuclear proteasome complex	1.44E-03
21	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.66E-03
22	GO:0005811: lipid particle	1.89E-03
23	GO:0009514: glyoxysome	1.89E-03
24	GO:0016602: CCAAT-binding factor complex	3.50E-03
25	GO:0030176: integral component of endoplasmic reticulum membrane	4.10E-03
26	GO:0005769: early endosome	4.42E-03
27	GO:0005741: mitochondrial outer membrane	5.42E-03
28	GO:0005789: endoplasmic reticulum membrane	6.81E-03
29	GO:0030136: clathrin-coated vesicle	6.86E-03
30	GO:0005774: vacuolar membrane	6.86E-03
31	GO:0005615: extracellular space	7.11E-03
32	GO:0048046: apoplast	7.47E-03
33	GO:0016020: membrane	7.86E-03
34	GO:0005788: endoplasmic reticulum lumen	1.19E-02
35	GO:0000151: ubiquitin ligase complex	1.38E-02
36	GO:0009570: chloroplast stroma	2.06E-02
37	GO:0031966: mitochondrial membrane	2.29E-02
38	GO:0005635: nuclear envelope	2.53E-02
39	GO:0005618: cell wall	2.84E-02
40	GO:0005623: cell	3.71E-02
41	GO:0005794: Golgi apparatus	4.52E-02