GO Enrichment Analysis of Co-expressed Genes with
AT4G32340
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 4 | GO:0009773: photosynthetic electron transport in photosystem I | 1.34E-10 |
| 5 | GO:0015979: photosynthesis | 3.50E-09 |
| 6 | GO:0006810: transport | 1.18E-06 |
| 7 | GO:0010206: photosystem II repair | 1.98E-05 |
| 8 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 3.86E-05 |
| 9 | GO:0080170: hydrogen peroxide transmembrane transport | 3.86E-05 |
| 10 | GO:0006094: gluconeogenesis | 6.73E-05 |
| 11 | GO:0015994: chlorophyll metabolic process | 6.89E-05 |
| 12 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.55E-04 |
| 13 | GO:0010196: nonphotochemical quenching | 2.76E-04 |
| 14 | GO:0034220: ion transmembrane transport | 3.18E-04 |
| 15 | GO:0000481: maturation of 5S rRNA | 3.29E-04 |
| 16 | GO:0010028: xanthophyll cycle | 3.29E-04 |
| 17 | GO:0034337: RNA folding | 3.29E-04 |
| 18 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 3.29E-04 |
| 19 | GO:0006824: cobalt ion transport | 3.29E-04 |
| 20 | GO:0071370: cellular response to gibberellin stimulus | 3.29E-04 |
| 21 | GO:0009735: response to cytokinin | 3.73E-04 |
| 22 | GO:0016122: xanthophyll metabolic process | 7.18E-04 |
| 23 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 7.18E-04 |
| 24 | GO:0055129: L-proline biosynthetic process | 7.18E-04 |
| 25 | GO:0034755: iron ion transmembrane transport | 7.18E-04 |
| 26 | GO:1900871: chloroplast mRNA modification | 7.18E-04 |
| 27 | GO:0019684: photosynthesis, light reaction | 8.13E-04 |
| 28 | GO:0018298: protein-chromophore linkage | 1.04E-03 |
| 29 | GO:0009767: photosynthetic electron transport chain | 1.05E-03 |
| 30 | GO:0045493: xylan catabolic process | 1.16E-03 |
| 31 | GO:2001295: malonyl-CoA biosynthetic process | 1.16E-03 |
| 32 | GO:0006000: fructose metabolic process | 1.16E-03 |
| 33 | GO:0006518: peptide metabolic process | 1.16E-03 |
| 34 | GO:0005985: sucrose metabolic process | 1.32E-03 |
| 35 | GO:0006833: water transport | 1.47E-03 |
| 36 | GO:0046836: glycolipid transport | 1.67E-03 |
| 37 | GO:0051513: regulation of monopolar cell growth | 1.67E-03 |
| 38 | GO:0009152: purine ribonucleotide biosynthetic process | 1.67E-03 |
| 39 | GO:0046653: tetrahydrofolate metabolic process | 1.67E-03 |
| 40 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 1.67E-03 |
| 41 | GO:1901332: negative regulation of lateral root development | 1.67E-03 |
| 42 | GO:0061077: chaperone-mediated protein folding | 1.97E-03 |
| 43 | GO:0019464: glycine decarboxylation via glycine cleavage system | 2.24E-03 |
| 44 | GO:0045727: positive regulation of translation | 2.24E-03 |
| 45 | GO:0030104: water homeostasis | 2.24E-03 |
| 46 | GO:0006546: glycine catabolic process | 2.24E-03 |
| 47 | GO:0006461: protein complex assembly | 2.87E-03 |
| 48 | GO:0009107: lipoate biosynthetic process | 2.87E-03 |
| 49 | GO:0016120: carotene biosynthetic process | 2.87E-03 |
| 50 | GO:0006561: proline biosynthetic process | 3.54E-03 |
| 51 | GO:0042549: photosystem II stabilization | 3.54E-03 |
| 52 | GO:1902456: regulation of stomatal opening | 3.54E-03 |
| 53 | GO:0009409: response to cold | 4.20E-03 |
| 54 | GO:0009645: response to low light intensity stimulus | 5.03E-03 |
| 55 | GO:0032508: DNA duplex unwinding | 5.85E-03 |
| 56 | GO:0010492: maintenance of shoot apical meristem identity | 5.85E-03 |
| 57 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 5.85E-03 |
| 58 | GO:0010439: regulation of glucosinolate biosynthetic process | 5.85E-03 |
| 59 | GO:0032544: plastid translation | 6.71E-03 |
| 60 | GO:0006002: fructose 6-phosphate metabolic process | 6.71E-03 |
| 61 | GO:0009657: plastid organization | 6.71E-03 |
| 62 | GO:0015995: chlorophyll biosynthetic process | 6.79E-03 |
| 63 | GO:0009817: defense response to fungus, incompatible interaction | 7.52E-03 |
| 64 | GO:0009051: pentose-phosphate shunt, oxidative branch | 7.60E-03 |
| 65 | GO:0006098: pentose-phosphate shunt | 7.60E-03 |
| 66 | GO:0048507: meristem development | 7.60E-03 |
| 67 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 7.60E-03 |
| 68 | GO:0032259: methylation | 8.22E-03 |
| 69 | GO:0006508: proteolysis | 9.63E-03 |
| 70 | GO:0034599: cellular response to oxidative stress | 9.99E-03 |
| 71 | GO:0008152: metabolic process | 1.02E-02 |
| 72 | GO:0009684: indoleacetic acid biosynthetic process | 1.06E-02 |
| 73 | GO:0009698: phenylpropanoid metabolic process | 1.06E-02 |
| 74 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.06E-02 |
| 75 | GO:0006006: glucose metabolic process | 1.27E-02 |
| 76 | GO:0005986: sucrose biosynthetic process | 1.27E-02 |
| 77 | GO:0010143: cutin biosynthetic process | 1.38E-02 |
| 78 | GO:0019253: reductive pentose-phosphate cycle | 1.38E-02 |
| 79 | GO:0010030: positive regulation of seed germination | 1.50E-02 |
| 80 | GO:0055114: oxidation-reduction process | 1.67E-02 |
| 81 | GO:0016575: histone deacetylation | 1.87E-02 |
| 82 | GO:0007017: microtubule-based process | 1.87E-02 |
| 83 | GO:0006096: glycolytic process | 1.97E-02 |
| 84 | GO:0043086: negative regulation of catalytic activity | 1.97E-02 |
| 85 | GO:0048511: rhythmic process | 2.00E-02 |
| 86 | GO:0019748: secondary metabolic process | 2.14E-02 |
| 87 | GO:0035428: hexose transmembrane transport | 2.14E-02 |
| 88 | GO:0006012: galactose metabolic process | 2.27E-02 |
| 89 | GO:0045454: cell redox homeostasis | 2.54E-02 |
| 90 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.55E-02 |
| 91 | GO:0080022: primary root development | 2.70E-02 |
| 92 | GO:0042631: cellular response to water deprivation | 2.70E-02 |
| 93 | GO:0006662: glycerol ether metabolic process | 2.85E-02 |
| 94 | GO:0046323: glucose import | 2.85E-02 |
| 95 | GO:0042752: regulation of circadian rhythm | 3.00E-02 |
| 96 | GO:0002229: defense response to oomycetes | 3.31E-02 |
| 97 | GO:0000302: response to reactive oxygen species | 3.31E-02 |
| 98 | GO:0019761: glucosinolate biosynthetic process | 3.47E-02 |
| 99 | GO:1901657: glycosyl compound metabolic process | 3.63E-02 |
| 100 | GO:0030163: protein catabolic process | 3.63E-02 |
| 101 | GO:0006464: cellular protein modification process | 3.79E-02 |
| 102 | GO:0007623: circadian rhythm | 4.10E-02 |
| 103 | GO:0001666: response to hypoxia | 4.30E-02 |
| 104 | GO:0042128: nitrate assimilation | 4.65E-02 |
| 105 | GO:0010411: xyloglucan metabolic process | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 2 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 3 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 4 | GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity | 0.00E+00 |
| 5 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 6 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 7 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 8 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 9 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 10 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 11 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 12 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 13 | GO:0005528: FK506 binding | 1.89E-09 |
| 14 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.61E-06 |
| 15 | GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity | 4.91E-06 |
| 16 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 6.89E-05 |
| 17 | GO:0031409: pigment binding | 1.15E-04 |
| 18 | GO:0004332: fructose-bisphosphate aldolase activity | 1.56E-04 |
| 19 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 2.12E-04 |
| 20 | GO:0004349: glutamate 5-kinase activity | 3.29E-04 |
| 21 | GO:0004350: glutamate-5-semialdehyde dehydrogenase activity | 3.29E-04 |
| 22 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 3.29E-04 |
| 23 | GO:0004033: aldo-keto reductase (NADP) activity | 3.48E-04 |
| 24 | GO:0017118: lipoyltransferase activity | 7.18E-04 |
| 25 | GO:0047746: chlorophyllase activity | 7.18E-04 |
| 26 | GO:0016868: intramolecular transferase activity, phosphotransferases | 7.18E-04 |
| 27 | GO:0016415: octanoyltransferase activity | 7.18E-04 |
| 28 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 7.18E-04 |
| 29 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 7.18E-04 |
| 30 | GO:0015250: water channel activity | 7.44E-04 |
| 31 | GO:0016168: chlorophyll binding | 7.98E-04 |
| 32 | GO:0030267: glyoxylate reductase (NADP) activity | 1.16E-03 |
| 33 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.16E-03 |
| 34 | GO:0008864: formyltetrahydrofolate deformylase activity | 1.16E-03 |
| 35 | GO:0004324: ferredoxin-NADP+ reductase activity | 1.16E-03 |
| 36 | GO:0050734: hydroxycinnamoyltransferase activity | 1.16E-03 |
| 37 | GO:0004075: biotin carboxylase activity | 1.16E-03 |
| 38 | GO:0008266: poly(U) RNA binding | 1.18E-03 |
| 39 | GO:0017089: glycolipid transporter activity | 1.67E-03 |
| 40 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.67E-03 |
| 41 | GO:0019201: nucleotide kinase activity | 1.67E-03 |
| 42 | GO:0016851: magnesium chelatase activity | 1.67E-03 |
| 43 | GO:0048487: beta-tubulin binding | 1.67E-03 |
| 44 | GO:0004185: serine-type carboxypeptidase activity | 1.92E-03 |
| 45 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.24E-03 |
| 46 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.24E-03 |
| 47 | GO:0051861: glycolipid binding | 2.24E-03 |
| 48 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 2.24E-03 |
| 49 | GO:0009044: xylan 1,4-beta-xylosidase activity | 2.24E-03 |
| 50 | GO:0003989: acetyl-CoA carboxylase activity | 2.87E-03 |
| 51 | GO:0004040: amidase activity | 2.87E-03 |
| 52 | GO:0003959: NADPH dehydrogenase activity | 2.87E-03 |
| 53 | GO:0008200: ion channel inhibitor activity | 3.54E-03 |
| 54 | GO:0004130: cytochrome-c peroxidase activity | 3.54E-03 |
| 55 | GO:0048038: quinone binding | 3.98E-03 |
| 56 | GO:0051920: peroxiredoxin activity | 4.26E-03 |
| 57 | GO:0009927: histidine phosphotransfer kinase activity | 4.26E-03 |
| 58 | GO:0004017: adenylate kinase activity | 4.26E-03 |
| 59 | GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity | 4.26E-03 |
| 60 | GO:0004602: glutathione peroxidase activity | 4.26E-03 |
| 61 | GO:0004564: beta-fructofuranosidase activity | 5.85E-03 |
| 62 | GO:0016209: antioxidant activity | 5.85E-03 |
| 63 | GO:0004034: aldose 1-epimerase activity | 5.85E-03 |
| 64 | GO:0004252: serine-type endopeptidase activity | 6.70E-03 |
| 65 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 6.71E-03 |
| 66 | GO:0008236: serine-type peptidase activity | 7.15E-03 |
| 67 | GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity | 7.60E-03 |
| 68 | GO:0004222: metalloendopeptidase activity | 8.30E-03 |
| 69 | GO:0004575: sucrose alpha-glucosidase activity | 8.55E-03 |
| 70 | GO:0005381: iron ion transmembrane transporter activity | 8.55E-03 |
| 71 | GO:0044183: protein binding involved in protein folding | 1.06E-02 |
| 72 | GO:0008378: galactosyltransferase activity | 1.16E-02 |
| 73 | GO:0031072: heat shock protein binding | 1.27E-02 |
| 74 | GO:0004565: beta-galactosidase activity | 1.27E-02 |
| 75 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.27E-02 |
| 76 | GO:0008168: methyltransferase activity | 1.47E-02 |
| 77 | GO:0004407: histone deacetylase activity | 1.75E-02 |
| 78 | GO:0005509: calcium ion binding | 1.79E-02 |
| 79 | GO:0004707: MAP kinase activity | 2.00E-02 |
| 80 | GO:0004176: ATP-dependent peptidase activity | 2.00E-02 |
| 81 | GO:0003756: protein disulfide isomerase activity | 2.41E-02 |
| 82 | GO:0047134: protein-disulfide reductase activity | 2.55E-02 |
| 83 | GO:0042803: protein homodimerization activity | 2.69E-02 |
| 84 | GO:0016787: hydrolase activity | 2.93E-02 |
| 85 | GO:0019843: rRNA binding | 2.98E-02 |
| 86 | GO:0004791: thioredoxin-disulfide reductase activity | 3.00E-02 |
| 87 | GO:0016853: isomerase activity | 3.00E-02 |
| 88 | GO:0005355: glucose transmembrane transporter activity | 3.00E-02 |
| 89 | GO:0050662: coenzyme binding | 3.00E-02 |
| 90 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.14E-02 |
| 91 | GO:0004518: nuclease activity | 3.47E-02 |
| 92 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.63E-02 |
| 93 | GO:0046910: pectinesterase inhibitor activity | 3.83E-02 |
| 94 | GO:0005200: structural constituent of cytoskeleton | 3.96E-02 |
| 95 | GO:0008237: metallopeptidase activity | 3.96E-02 |
| 96 | GO:0051213: dioxygenase activity | 4.30E-02 |
| 97 | GO:0102483: scopolin beta-glucosidase activity | 4.82E-02 |
| 98 | GO:0004721: phosphoprotein phosphatase activity | 4.82E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009344: nitrite reductase complex [NAD(P)H] | 0.00E+00 |
| 2 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 3 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 4 | GO:0009507: chloroplast | 7.43E-46 |
| 5 | GO:0009534: chloroplast thylakoid | 1.90E-33 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 3.71E-32 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 8.94E-23 |
| 8 | GO:0009570: chloroplast stroma | 5.58E-20 |
| 9 | GO:0009941: chloroplast envelope | 5.28E-19 |
| 10 | GO:0009579: thylakoid | 2.47E-13 |
| 11 | GO:0031977: thylakoid lumen | 1.40E-12 |
| 12 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 2.08E-11 |
| 13 | GO:0030095: chloroplast photosystem II | 5.75E-10 |
| 14 | GO:0009654: photosystem II oxygen evolving complex | 1.56E-07 |
| 15 | GO:0019898: extrinsic component of membrane | 1.26E-06 |
| 16 | GO:0010287: plastoglobule | 1.34E-06 |
| 17 | GO:0031969: chloroplast membrane | 4.15E-06 |
| 18 | GO:0009533: chloroplast stromal thylakoid | 2.76E-04 |
| 19 | GO:0009782: photosystem I antenna complex | 3.29E-04 |
| 20 | GO:0043674: columella | 3.29E-04 |
| 21 | GO:0009783: photosystem II antenna complex | 3.29E-04 |
| 22 | GO:0010007: magnesium chelatase complex | 1.16E-03 |
| 23 | GO:0030076: light-harvesting complex | 1.32E-03 |
| 24 | GO:0009531: secondary cell wall | 1.67E-03 |
| 25 | GO:0005775: vacuolar lumen | 1.67E-03 |
| 26 | GO:0005960: glycine cleavage complex | 1.67E-03 |
| 27 | GO:0042651: thylakoid membrane | 1.80E-03 |
| 28 | GO:0048046: apoplast | 2.24E-03 |
| 29 | GO:0009522: photosystem I | 3.47E-03 |
| 30 | GO:0009523: photosystem II | 3.72E-03 |
| 31 | GO:0042807: central vacuole | 5.03E-03 |
| 32 | GO:0010319: stromule | 5.13E-03 |
| 33 | GO:0042644: chloroplast nucleoid | 7.60E-03 |
| 34 | GO:0045298: tubulin complex | 7.60E-03 |
| 35 | GO:0032040: small-subunit processome | 1.16E-02 |
| 36 | GO:0009508: plastid chromosome | 1.27E-02 |
| 37 | GO:0009706: chloroplast inner membrane | 2.38E-02 |
| 38 | GO:0009505: plant-type cell wall | 3.00E-02 |
| 39 | GO:0009295: nucleoid | 3.96E-02 |
| 40 | GO:0005887: integral component of plasma membrane | 4.79E-02 |