co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G31820

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090627: plant epidermal cell differentiation	0.00E+00
2	GO:0045014: negative regulation of transcription by glucose	0.00E+00
3	GO:0048443: stamen development	1.31E-05
4	GO:0070509: calcium ion import	8.09E-05
5	GO:0007263: nitric oxide mediated signal transduction	8.09E-05
6	GO:0015808: L-alanine transport	8.09E-05
7	GO:0010480: microsporocyte differentiation	8.09E-05
8	GO:0031338: regulation of vesicle fusion	8.09E-05
9	GO:0015936: coenzyme A metabolic process	8.09E-05
10	GO:0010152: pollen maturation	1.30E-04
11	GO:0046373: L-arabinose metabolic process	1.93E-04
12	GO:0010541: acropetal auxin transport	1.93E-04
13	GO:0098712: L-glutamate import across plasma membrane	1.93E-04
14	GO:0015804: neutral amino acid transport	1.93E-04
15	GO:0055129: L-proline biosynthetic process	1.93E-04
16	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	2.48E-04
17	GO:0045493: xylan catabolic process	3.24E-04
18	GO:0090630: activation of GTPase activity	3.24E-04
19	GO:0010160: formation of animal organ boundary	3.24E-04
20	GO:0051639: actin filament network formation	4.66E-04
21	GO:0080170: hydrogen peroxide transmembrane transport	4.66E-04
22	GO:0043481: anthocyanin accumulation in tissues in response to UV light	4.66E-04
23	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	6.21E-04
24	GO:0051764: actin crosslink formation	6.21E-04
25	GO:0006085: acetyl-CoA biosynthetic process	6.21E-04
26	GO:0009913: epidermal cell differentiation	9.59E-04
27	GO:0060918: auxin transport	9.59E-04
28	GO:0006561: proline biosynthetic process	9.59E-04
29	GO:0006751: glutathione catabolic process	9.59E-04
30	GO:0042549: photosystem II stabilization	9.59E-04
31	GO:0048280: vesicle fusion with Golgi apparatus	1.14E-03
32	GO:0043090: amino acid import	1.34E-03
33	GO:0048437: floral organ development	1.34E-03
34	GO:0070413: trehalose metabolism in response to stress	1.54E-03
35	GO:0009640: photomorphogenesis	1.74E-03
36	GO:0048589: developmental growth	1.98E-03
37	GO:0048507: meristem development	1.98E-03
38	GO:0009638: phototropism	2.22E-03
39	GO:0045036: protein targeting to chloroplast	2.46E-03
40	GO:0010215: cellulose microfibril organization	2.46E-03
41	GO:0006896: Golgi to vacuole transport	2.46E-03
42	GO:0006629: lipid metabolic process	2.70E-03
43	GO:1903507: negative regulation of nucleic acid-templated transcription	2.71E-03
44	GO:0048229: gametophyte development	2.71E-03
45	GO:0048364: root development	2.85E-03
46	GO:0008361: regulation of cell size	2.97E-03
47	GO:0009718: anthocyanin-containing compound biosynthetic process	3.24E-03
48	GO:0010075: regulation of meristem growth	3.24E-03
49	GO:0009785: blue light signaling pathway	3.24E-03
50	GO:0010540: basipetal auxin transport	3.52E-03
51	GO:0009934: regulation of meristem structural organization	3.52E-03
52	GO:0009825: multidimensional cell growth	3.81E-03
53	GO:0006636: unsaturated fatty acid biosynthetic process	4.10E-03
54	GO:0006833: water transport	4.10E-03
55	GO:0051017: actin filament bundle assembly	4.40E-03
56	GO:0006289: nucleotide-excision repair	4.40E-03
57	GO:0005992: trehalose biosynthetic process	4.40E-03
58	GO:0008299: isoprenoid biosynthetic process	4.70E-03
59	GO:0006633: fatty acid biosynthetic process	5.18E-03
60	GO:2000022: regulation of jasmonic acid mediated signaling pathway	5.34E-03
61	GO:0009416: response to light stimulus	5.59E-03
62	GO:0006284: base-excision repair	6.01E-03
63	GO:0042147: retrograde transport, endosome to Golgi	6.35E-03
64	GO:0000271: polysaccharide biosynthetic process	6.70E-03
65	GO:0034220: ion transmembrane transport	6.70E-03
66	GO:0048653: anther development	6.70E-03
67	GO:0042391: regulation of membrane potential	6.70E-03
68	GO:0010305: leaf vascular tissue pattern formation	7.06E-03
69	GO:0009958: positive gravitropism	7.06E-03
70	GO:0045489: pectin biosynthetic process	7.06E-03
71	GO:0048825: cotyledon development	7.79E-03
72	GO:0006623: protein targeting to vacuole	7.79E-03
73	GO:0009791: post-embryonic development	7.79E-03
74	GO:0006891: intra-Golgi vesicle-mediated transport	8.17E-03
75	GO:0071554: cell wall organization or biogenesis	8.17E-03
76	GO:0009639: response to red or far red light	9.34E-03
77	GO:0071805: potassium ion transmembrane transport	9.75E-03
78	GO:0007049: cell cycle	9.82E-03
79	GO:0016126: sterol biosynthetic process	1.06E-02
80	GO:0009816: defense response to bacterium, incompatible interaction	1.10E-02
81	GO:0046777: protein autophosphorylation	1.17E-02
82	GO:0006888: ER to Golgi vesicle-mediated transport	1.19E-02
83	GO:0015995: chlorophyll biosynthetic process	1.19E-02
84	GO:0030244: cellulose biosynthetic process	1.27E-02
85	GO:0009817: defense response to fungus, incompatible interaction	1.27E-02
86	GO:0010311: lateral root formation	1.32E-02
87	GO:0010218: response to far red light	1.37E-02
88	GO:0048527: lateral root development	1.41E-02
89	GO:0009910: negative regulation of flower development	1.41E-02
90	GO:0009631: cold acclimation	1.41E-02
91	GO:0009867: jasmonic acid mediated signaling pathway	1.51E-02
92	GO:0016051: carbohydrate biosynthetic process	1.51E-02
93	GO:0009637: response to blue light	1.51E-02
94	GO:0009733: response to auxin	1.59E-02
95	GO:0016567: protein ubiquitination	1.63E-02
96	GO:0008152: metabolic process	1.78E-02
97	GO:0009926: auxin polar transport	1.80E-02
98	GO:0031347: regulation of defense response	2.07E-02
99	GO:0009664: plant-type cell wall organization	2.12E-02
100	GO:0042538: hyperosmotic salinity response	2.12E-02
101	GO:0006810: transport	2.23E-02
102	GO:0006813: potassium ion transport	2.23E-02
103	GO:0009734: auxin-activated signaling pathway	2.28E-02
104	GO:0005975: carbohydrate metabolic process	2.32E-02
105	GO:0009908: flower development	2.60E-02
106	GO:0009626: plant-type hypersensitive response	2.63E-02
107	GO:0009620: response to fungus	2.69E-02
108	GO:0009624: response to nematode	2.87E-02
109	GO:0007165: signal transduction	3.44E-02
110	GO:0009845: seed germination	3.56E-02
111	GO:0055085: transmembrane transport	3.64E-02
112	GO:0009790: embryo development	3.76E-02
113	GO:0006511: ubiquitin-dependent protein catabolic process	3.89E-02
114	GO:0009793: embryo development ending in seed dormancy	3.91E-02
115	GO:0006952: defense response	3.93E-02
116	GO:0016036: cellular response to phosphate starvation	4.02E-02
117	GO:0006413: translational initiation	4.02E-02
118	GO:0016310: phosphorylation	4.20E-02
119	GO:0007623: circadian rhythm	4.23E-02
120	GO:0010228: vegetative to reproductive phase transition of meristem	4.37E-02
121	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.58E-02
122	GO:0007166: cell surface receptor signaling pathway	4.65E-02
123	GO:0010468: regulation of gene expression	4.80E-02

Rank	GO Term	Adjusted P value
1	GO:0038198: auxin receptor activity	0.00E+00
2	GO:0005222: intracellular cAMP activated cation channel activity	0.00E+00
3	GO:0010011: auxin binding	6.24E-06
4	GO:0030941: chloroplast targeting sequence binding	8.09E-05
5	GO:0005221: intracellular cyclic nucleotide activated cation channel activity	8.09E-05
6	GO:0050139: nicotinate-N-glucosyltransferase activity	8.09E-05
7	GO:0046912: transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	8.09E-05
8	GO:0004420: hydroxymethylglutaryl-CoA reductase (NADPH) activity	8.09E-05
9	GO:0015194: L-serine transmembrane transporter activity	8.09E-05
10	GO:0042282: hydroxymethylglutaryl-CoA reductase activity	8.09E-05
11	GO:0004349: glutamate 5-kinase activity	8.09E-05
12	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	8.09E-05
13	GO:0008081: phosphoric diester hydrolase activity	1.49E-04
14	GO:0000822: inositol hexakisphosphate binding	1.93E-04
15	GO:0015180: L-alanine transmembrane transporter activity	1.93E-04
16	GO:0003839: gamma-glutamylcyclotransferase activity	1.93E-04
17	GO:0004312: fatty acid synthase activity	1.93E-04
18	GO:0015193: L-proline transmembrane transporter activity	3.24E-04
19	GO:0016805: dipeptidase activity	3.24E-04
20	GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity	3.24E-04
21	GO:0004180: carboxypeptidase activity	3.24E-04
22	GO:0003825: alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity	4.66E-04
23	GO:0015186: L-glutamine transmembrane transporter activity	4.66E-04
24	GO:0003878: ATP citrate synthase activity	4.66E-04
25	GO:0015175: neutral amino acid transmembrane transporter activity	4.66E-04
26	GO:0070628: proteasome binding	6.21E-04
27	GO:0009044: xylan 1,4-beta-xylosidase activity	6.21E-04
28	GO:0008526: phosphatidylinositol transporter activity	6.21E-04
29	GO:0046556: alpha-L-arabinofuranosidase activity	6.21E-04
30	GO:0051861: glycolipid binding	6.21E-04
31	GO:0005313: L-glutamate transmembrane transporter activity	6.21E-04
32	GO:0008725: DNA-3-methyladenine glycosylase activity	7.86E-04
33	GO:0017137: Rab GTPase binding	7.86E-04
34	GO:0031593: polyubiquitin binding	9.59E-04
35	GO:0042578: phosphoric ester hydrolase activity	9.59E-04
36	GO:0005242: inward rectifier potassium channel activity	1.14E-03
37	GO:0005261: cation channel activity	1.14E-03
38	GO:0004033: aldo-keto reductase (NADP) activity	1.54E-03
39	GO:0016301: kinase activity	1.63E-03
40	GO:0004805: trehalose-phosphatase activity	2.46E-03
41	GO:0004674: protein serine/threonine kinase activity	3.09E-03
42	GO:0005262: calcium channel activity	3.24E-03
43	GO:0004565: beta-galactosidase activity	3.24E-03
44	GO:0010329: auxin efflux transmembrane transporter activity	3.24E-03
45	GO:0004190: aspartic-type endopeptidase activity	3.81E-03
46	GO:0030552: cAMP binding	3.81E-03
47	GO:0030553: cGMP binding	3.81E-03
48	GO:0008289: lipid binding	4.11E-03
49	GO:0043130: ubiquitin binding	4.40E-03
50	GO:0003714: transcription corepressor activity	4.40E-03
51	GO:0016829: lyase activity	4.47E-03
52	GO:0005216: ion channel activity	4.70E-03
53	GO:0015079: potassium ion transmembrane transporter activity	4.70E-03
54	GO:0033612: receptor serine/threonine kinase binding	5.02E-03
55	GO:0019706: protein-cysteine S-palmitoyltransferase activity	5.02E-03
56	GO:0004707: MAP kinase activity	5.02E-03
57	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	5.34E-03
58	GO:0030551: cyclic nucleotide binding	6.70E-03
59	GO:0004518: nuclease activity	8.56E-03
60	GO:0051015: actin filament binding	8.94E-03
61	GO:0005524: ATP binding	9.20E-03
62	GO:0003684: damaged DNA binding	9.34E-03
63	GO:0016413: O-acetyltransferase activity	1.02E-02
64	GO:0005515: protein binding	1.03E-02
65	GO:0015250: water channel activity	1.06E-02
66	GO:0016798: hydrolase activity, acting on glycosyl bonds	1.19E-02
67	GO:0005096: GTPase activator activity	1.32E-02
68	GO:0004871: signal transducer activity	1.37E-02
69	GO:0000149: SNARE binding	1.60E-02
70	GO:0050661: NADP binding	1.65E-02
71	GO:0005484: SNAP receptor activity	1.80E-02
72	GO:0035091: phosphatidylinositol binding	1.91E-02
73	GO:0015293: symporter activity	1.96E-02
74	GO:0016298: lipase activity	2.29E-02
75	GO:0015171: amino acid transmembrane transporter activity	2.40E-02
76	GO:0031625: ubiquitin protein ligase binding	2.40E-02
77	GO:0004650: polygalacturonase activity	2.69E-02
78	GO:0080043: quercetin 3-O-glucosyltransferase activity	2.69E-02
79	GO:0080044: quercetin 7-O-glucosyltransferase activity	2.69E-02
80	GO:0015035: protein disulfide oxidoreductase activity	2.93E-02
81	GO:0016758: transferase activity, transferring hexosyl groups	3.30E-02
82	GO:0004252: serine-type endopeptidase activity	3.62E-02
83	GO:0008565: protein transporter activity	3.82E-02
84	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.02E-02
85	GO:0008194: UDP-glycosyltransferase activity	4.58E-02
86	GO:0003743: translation initiation factor activity	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009930: longitudinal side of cell surface	0.00E+00
3	GO:0005886: plasma membrane	5.31E-07
4	GO:0009505: plant-type cell wall	2.79E-05
5	GO:0009897: external side of plasma membrane	3.24E-04
6	GO:0016328: lateral plasma membrane	3.24E-04
7	GO:0032432: actin filament bundle	4.66E-04
8	GO:0009346: citrate lyase complex	4.66E-04
9	GO:0030660: Golgi-associated vesicle membrane	6.21E-04
10	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	6.21E-04
11	GO:0031359: integral component of chloroplast outer membrane	1.34E-03
12	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	1.54E-03
13	GO:0012507: ER to Golgi transport vesicle membrane	1.54E-03
14	GO:0005884: actin filament	2.71E-03
15	GO:0005765: lysosomal membrane	2.71E-03
16	GO:0005578: proteinaceous extracellular matrix	3.24E-03
17	GO:0030659: cytoplasmic vesicle membrane	3.52E-03
18	GO:0005773: vacuole	3.58E-03
19	GO:0000151: ubiquitin ligase complex	1.27E-02
20	GO:0019005: SCF ubiquitin ligase complex	1.27E-02
21	GO:0009707: chloroplast outer membrane	1.27E-02
22	GO:0031902: late endosome membrane	1.70E-02
23	GO:0031201: SNARE complex	1.70E-02
24	GO:0016021: integral component of membrane	1.85E-02
25	GO:0009506: plasmodesma	2.10E-02
26	GO:0005887: integral component of plasma membrane	2.20E-02
27	GO:0005789: endoplasmic reticulum membrane	2.34E-02
28	GO:0010008: endosome membrane	2.57E-02
29	GO:0012505: endomembrane system	2.81E-02
30	GO:0005794: Golgi apparatus	3.68E-02